BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060671.seq (688 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 164 5e-41 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 161 4e-40 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 142 2e-34 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 7e-30 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 6e-16 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 81 1e-15 SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 55 5e-08 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05 SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04 SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.87 SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 2.0 SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0 SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 29 2.7 SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.7 SB_16744| Best HMM Match : DUF1610 (HMM E-Value=1.6) 28 6.2 SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2 SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1 SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 8.1 SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.1 SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 164 bits (399), Expect = 5e-41 Identities = 85/142 (59%), Positives = 102/142 (71%) Frame = +1 Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435 NP NT+FDAKRLIGRKF+D V DM HWPF V+ G +PKI+V +KGE K+FFPEE+SS Sbjct: 62 NPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISS 121 Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615 MVLTKMKETAEAYLG V +AV+TVP + + K +GLNV INEPTAAA Sbjct: 122 MVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNV-LRIINEPTAAA 180 Query: 616 IAYGL*QKRYLENEMYLSFDLG 681 IAYGL +K +E + L +DLG Sbjct: 181 IAYGLDKKVGVERNV-LIYDLG 201 Score = 127 bits (306), Expect = 1e-29 Identities = 59/63 (93%), Positives = 60/63 (95%) Frame = +2 Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253 MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60 Query: 254 RTP 262 P Sbjct: 61 MNP 63 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 161 bits (392), Expect = 4e-40 Identities = 86/142 (60%), Positives = 102/142 (71%) Frame = +1 Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435 NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++S KPKI+V YKGE KTF EE+SS Sbjct: 62 NPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISS 121 Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615 MVL KMKETAEAYLG+ V +AVITVP + + K +GLNV INEPTAAA Sbjct: 122 MVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNV-LRVINEPTAAA 180 Query: 616 IAYGL*QKRYLENEMYLSFDLG 681 +AYGL K + L FDLG Sbjct: 181 LAYGL-DKSLSGEKNVLIFDLG 201 Score = 123 bits (296), Expect = 2e-28 Identities = 56/63 (88%), Positives = 59/63 (93%) Frame = +2 Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253 M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60 Query: 254 RTP 262 P Sbjct: 61 LNP 63 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 142 bits (345), Expect = 2e-34 Identities = 78/142 (54%), Positives = 97/142 (68%) Frame = +1 Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435 NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+ Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISA 819 Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615 MVLTKMKETAEAYLGK V +AV+TVP + + K +GL V INEPTAAA Sbjct: 820 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTV-MRIINEPTAAA 878 Query: 616 IAYGL*QKRYLENEMYLSFDLG 681 IAYG+ +K +N L FDLG Sbjct: 879 IAYGMDKKEGEKN--ILVFDLG 898 Score = 97.5 bits (232), Expect = 9e-21 Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 1/58 (1%) Frame = +2 Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVARTP 262 +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 127 bits (307), Expect = 7e-30 Identities = 58/64 (90%), Positives = 60/64 (93%) Frame = +2 Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253 M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60 Query: 254 RTPT 265 PT Sbjct: 61 MNPT 64 Score = 114 bits (274), Expect = 7e-26 Identities = 64/111 (57%), Positives = 72/111 (64%), Gaps = 25/111 (22%) Frame = +1 Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEV-- 429 NP NTIFDAKRLIGR+F+D V+ DMKHW FEVV+ G+PK+KV YKGE KTFF EEV Sbjct: 62 NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVN 121 Query: 430 -----------------------SSMVLTKMKETAEAYLGKTVQNAVITVP 513 SSMVL KMKETAEAYLG V +AV+TVP Sbjct: 122 EAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172 Score = 76.2 bits (179), Expect = 2e-14 Identities = 47/86 (54%), Positives = 55/86 (63%) Frame = +1 Query: 424 EVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEP 603 ++SSMVL KMKETAEAYLG V +AV+TVP + + K SGLNV INEP Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNV-LRIINEP 269 Query: 604 TAAAIAYGL*QKRYLENEMYLSFDLG 681 TAAAIAYGL K+ + L FDLG Sbjct: 270 TAAAIAYGL-DKKVGQERNVLIFDLG 294 Score = 38.7 bits (86), Expect = 0.004 Identities = 17/20 (85%), Positives = 17/20 (85%) Frame = +3 Query: 510 PAYFNDSQRQATKDAGTIFR 569 PAYFNDSQRQATKDAG R Sbjct: 172 PAYFNDSQRQATKDAGESVR 191 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 81.4 bits (192), Expect = 6e-16 Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Frame = +1 Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKP-KIKVAYKGEDKTFFPEEVS 432 N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177 Query: 433 SMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAA 612 +M+ T++K TAE L V + VI+VP + + ++GLN +N+ TA Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLN-CLRLMNDTTAV 236 Query: 613 AIAYGL 630 ++AYG+ Sbjct: 237 SLAYGI 242 Score = 49.6 bits (113), Expect = 2e-06 Identities = 22/52 (42%), Positives = 33/52 (63%) Frame = +2 Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 247 VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 80.6 bits (190), Expect = 1e-15 Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%) Frame = +1 Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXG-GKPKIKVAYKGEDKTFFPEEVS 432 NP NTI+DAKR IG+ F + K + F V + G V KG PEE+ Sbjct: 91 NPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIG 150 Query: 433 SMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPS-SGLNVSSEFINEPTA 609 V+ K++ AE L TV AV++VP +K + ++ S +G+ V INEPTA Sbjct: 151 GYVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAASLAGITVL-RVINEPTA 208 Query: 610 AAIAYGL*QKRYLENEMYLSFDLG 681 AA+AYGL +K + N M + DLG Sbjct: 209 AALAYGLHKKEGVANVMVV--DLG 230 Score = 61.3 bits (142), Expect = 7e-10 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%) Frame = +2 Query: 80 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253 K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89 Query: 254 RTP 262 P Sbjct: 90 INP 92 >SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) Length = 179 Score = 55.2 bits (127), Expect = 5e-08 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 23/111 (20%) Frame = +1 Query: 379 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQV 558 I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVP + + K Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61 Query: 559 PSSGLNVSS-----------------------EFINEPTAAAIAYGL*QKR 642 +GL+V S INEPTAAAIAYGL + R Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKAR 112 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 47.2 bits (107), Expect = 1e-05 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 3/106 (2%) Frame = +1 Query: 373 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKM 552 P +K Y+ D TF PEE+ M+L + E + +++ V+TVP + + Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126 Query: 553 QVPSSGLNVSSEFINEPTAAAIAYGL*QKRYLENEM---YLSFDLG 681 GLNV + +N TA A+ YGL Q++ + + ++ +D+G Sbjct: 127 AAELVGLNV-LQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171 >SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) Length = 592 Score = 41.5 bits (93), Expect = 6e-04 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = +2 Query: 143 GKVEIIANDQGNRTTPSYVAFTDTERLI 226 G IIAND G+R TP+ VAF+DTE+LI Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110 >SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) Length = 212 Score = 31.1 bits (67), Expect = 0.87 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%) Frame = +2 Query: 152 EIIANDQGNRTTPSYVAFT-DTERL 223 ++I N +G+RTTPS VAFT + ERL Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31 >SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) Length = 1011 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +1 Query: 370 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQK 549 +PK K + E+ EE +M ++K LGK V+ + T ++TL + Q Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713 Query: 550 MQ 555 Q Sbjct: 714 SQ 715 >SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 665 Score = 29.9 bits (64), Expect = 2.0 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 61 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 237 L++ N + ++ + R GY L R C R + +R + H++L R +RC Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282 Query: 238 QEPGGENPNNTIFDA 282 G +P NT F+A Sbjct: 283 GTASGMDPKNTPFNA 297 >SB_24762| Best HMM Match : Astacin (HMM E-Value=0) Length = 733 Score = 29.5 bits (63), Expect = 2.7 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -2 Query: 555 LHLLWLVFESH*STRDRDNCILHSFAEIS 469 ++ LWL F + S+ D C+LHS A ++ Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443 >SB_9053| Best HMM Match : TIG (HMM E-Value=0) Length = 2990 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 20 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 106 HVC +V T K K ++K PA GI+L Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228 >SB_16744| Best HMM Match : DUF1610 (HMM E-Value=1.6) Length = 130 Score = 28.3 bits (60), Expect = 6.2 Identities = 19/66 (28%), Positives = 30/66 (45%) Frame = -3 Query: 686 RRPRSKDKYISFSKYLFCQRPXAIAAAVGSLMNSEETFKPEDGTCIFCGLSLRVIEVRGT 507 ++PR K K+ SFS + + R + + G ++ ET K + FCG L E+ Sbjct: 21 QQPRLKGKFYSFSLFTYAFRETGVVSKNGERIDM-ETLKRK--MLSFCGRDLTEKELANK 77 Query: 506 VITAFC 489 T C Sbjct: 78 YTTPRC 83 >SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 117 Score = 28.3 bits (60), Expect = 6.2 Identities = 23/69 (33%), Positives = 32/69 (46%) Frame = -2 Query: 321 HSSIFELTSDETFGIEYCVVGVLATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFP 142 +S + L + T +EY +GVLATW R + V AT L W L +++T Sbjct: 23 YSRLGVLATWSTGDLEYWRLGVLATWSTGDLEYSR-LGVLATWSTGDLEYWRLGVLAT-- 79 Query: 141 CWKTPTQEY 115 W T EY Sbjct: 80 -WSTGDLEY 87 >SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 27.9 bits (59), Expect = 8.1 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +3 Query: 201 RSQTPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCAS 326 R+ P S+ PP RW+ P Q QT H R Y S Sbjct: 37 RTAEPLSHSKRPPPRRWKAPLQRCRMSQTQHGYRQGRAYTFS 78 >SB_42630| Best HMM Match : Ets (HMM E-Value=0) Length = 631 Score = 27.9 bits (59), Expect = 8.1 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +3 Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245 IW P+ L++S R+S + PLR L P VSS +P T Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89 >SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) Length = 1488 Score = 27.9 bits (59), Expect = 8.1 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +3 Query: 417 PRGSQFHGAYENEGNCRSLSRQNCAECSYHGPAYFN 524 PRG Q Y G+C S+S++NC + S+ +N Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175 >SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 977 Score = 27.9 bits (59), Expect = 8.1 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +3 Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245 IW P+ L++S R+S + PLR L P VSS +P T Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,661,321 Number of Sequences: 59808 Number of extensions: 555120 Number of successful extensions: 1776 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1541 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1757 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1781448916 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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