SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060671.seq
         (688 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                      164   5e-41
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                       161   4e-40
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                      142   2e-34
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)             127   7e-30
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)              81   6e-16
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)                 81   1e-15
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)              55   5e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   1e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)                 42   6e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)                 31   0.87 
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)                 30   2.0  
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_24762| Best HMM Match : Astacin (HMM E-Value=0)                     29   2.7  
SB_9053| Best HMM Match : TIG (HMM E-Value=0)                          29   4.7  
SB_16744| Best HMM Match : DUF1610 (HMM E-Value=1.6)                   28   6.2  
SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.2  
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.1  
SB_42630| Best HMM Match : Ets (HMM E-Value=0)                         28   8.1  
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)                     28   8.1  
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.1  

>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score =  164 bits (399), Expect = 5e-41
 Identities = 85/142 (59%), Positives = 102/142 (71%)
 Frame = +1

Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
           NP NT+FDAKRLIGRKF+D  V  DM HWPF V+  G +PKI+V +KGE K+FFPEE+SS
Sbjct: 62  NPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISS 121

Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615
           MVLTKMKETAEAYLG  V +AV+TVP      + +  K     +GLNV    INEPTAAA
Sbjct: 122 MVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNV-LRIINEPTAAA 180

Query: 616 IAYGL*QKRYLENEMYLSFDLG 681
           IAYGL +K  +E  + L +DLG
Sbjct: 181 IAYGLDKKVGVERNV-LIYDLG 201



 Score =  127 bits (306), Expect = 1e-29
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = +2

Query: 74  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
           MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1   MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60

Query: 254 RTP 262
             P
Sbjct: 61  MNP 63


>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score =  161 bits (392), Expect = 4e-40
 Identities = 86/142 (60%), Positives = 102/142 (71%)
 Frame = +1

Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
           NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++S   KPKI+V YKGE KTF  EE+SS
Sbjct: 62  NPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISS 121

Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615
           MVL KMKETAEAYLG+ V +AVITVP      + +  K     +GLNV    INEPTAAA
Sbjct: 122 MVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNV-LRVINEPTAAA 180

Query: 616 IAYGL*QKRYLENEMYLSFDLG 681
           +AYGL  K     +  L FDLG
Sbjct: 181 LAYGL-DKSLSGEKNVLIFDLG 201



 Score =  123 bits (296), Expect = 2e-28
 Identities = 56/63 (88%), Positives = 59/63 (93%)
 Frame = +2

Query: 74  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
           M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1   MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60

Query: 254 RTP 262
             P
Sbjct: 61  LNP 63


>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score =  142 bits (345), Expect = 2e-34
 Identities = 78/142 (54%), Positives = 97/142 (68%)
 Frame = +1

Query: 256  NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
            NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV    KP ++V  K E KTF  EE+S+
Sbjct: 760  NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISA 819

Query: 436  MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615
            MVLTKMKETAEAYLGK V +AV+TVP      + +  K     +GL V    INEPTAAA
Sbjct: 820  MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTV-MRIINEPTAAA 878

Query: 616  IAYGL*QKRYLENEMYLSFDLG 681
            IAYG+ +K   +N   L FDLG
Sbjct: 879  IAYGMDKKEGEKN--ILVFDLG 898



 Score = 97.5 bits (232), Expect = 9e-21
 Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
 Frame = +2

Query: 92  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVARTP 262
           +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+  ERLIGD AKNQ+   P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score =  127 bits (307), Expect = 7e-30
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +2

Query: 74  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
           M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1   MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60

Query: 254 RTPT 265
             PT
Sbjct: 61  MNPT 64



 Score =  114 bits (274), Expect = 7e-26
 Identities = 64/111 (57%), Positives = 72/111 (64%), Gaps = 25/111 (22%)
 Frame = +1

Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEV-- 429
           NP NTIFDAKRLIGR+F+D  V+ DMKHW FEVV+  G+PK+KV YKGE KTFF EEV  
Sbjct: 62  NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVN 121

Query: 430 -----------------------SSMVLTKMKETAEAYLGKTVQNAVITVP 513
                                  SSMVL KMKETAEAYLG  V +AV+TVP
Sbjct: 122 EAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172



 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 47/86 (54%), Positives = 55/86 (63%)
 Frame = +1

Query: 424 EVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEP 603
           ++SSMVL KMKETAEAYLG  V +AV+TVP      + +  K     SGLNV    INEP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNV-LRIINEP 269

Query: 604 TAAAIAYGL*QKRYLENEMYLSFDLG 681
           TAAAIAYGL  K+  +    L FDLG
Sbjct: 270 TAAAIAYGL-DKKVGQERNVLIFDLG 294



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +3

Query: 510 PAYFNDSQRQATKDAGTIFR 569
           PAYFNDSQRQATKDAG   R
Sbjct: 172 PAYFNDSQRQATKDAGESVR 191


>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
 Frame = +1

Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKP-KIKVAYKGEDKTFFPEEVS 432
           N  NTI   KR IGRKF D  VQ ++ H P++VV        I+V Y G+ + F PE+V 
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177

Query: 433 SMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAA 612
           +M+ T++K TAE  L   V + VI+VP      + +       ++GLN     +N+ TA 
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLN-CLRLMNDTTAV 236

Query: 613 AIAYGL 630
           ++AYG+
Sbjct: 237 SLAYGI 242



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +2

Query: 92  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 247
           VG D+G     + V + G +E +AN+  +R TPS+V+  D +RLIG + KNQ
Sbjct: 4   VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55


>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
          Length = 437

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
 Frame = +1

Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXG-GKPKIKVAYKGEDKTFFPEEVS 432
           NP NTI+DAKR IG+ F    +    K + F V +   G     V  KG      PEE+ 
Sbjct: 91  NPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIG 150

Query: 433 SMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPS-SGLNVSSEFINEPTA 609
             V+ K++  AE  L  TV  AV++VP     +K +   ++  S +G+ V    INEPTA
Sbjct: 151 GYVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAASLAGITVL-RVINEPTA 208

Query: 610 AAIAYGL*QKRYLENEMYLSFDLG 681
           AA+AYGL +K  + N M +  DLG
Sbjct: 209 AALAYGLHKKEGVANVMVV--DLG 230



 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = +2

Query: 80  KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
           K   +GIDLGTTYSCVG +Q   G+++I +++  ++  PS VAFTD   L+G+ A +Q  
Sbjct: 30  KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89

Query: 254 RTP 262
             P
Sbjct: 90  INP 92


>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
          Length = 179

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 23/111 (20%)
 Frame = +1

Query: 379 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQV 558
           I V   GE ++F PE++S++VL ++K  AEA+LG+ V+ AVITVP      + +  K   
Sbjct: 2   IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61

Query: 559 PSSGLNVSS-----------------------EFINEPTAAAIAYGL*QKR 642
             +GL+V S                         INEPTAAAIAYGL + R
Sbjct: 62  TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKAR 112


>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1019

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
 Frame = +1

Query: 373 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKM 552
           P +K  Y+  D TF PEE+  M+L   +   E +    +++ V+TVP      + +    
Sbjct: 68  PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126

Query: 553 QVPSSGLNVSSEFINEPTAAAIAYGL*QKRYLENEM---YLSFDLG 681
                GLNV  + +N  TA A+ YGL Q++   + +   ++ +D+G
Sbjct: 127 AAELVGLNV-LQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171


>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
          Length = 592

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +2

Query: 143 GKVEIIANDQGNRTTPSYVAFTDTERLI 226
           G   IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83  GNTTIIANDAGDRVTPAMVAFSDTEKLI 110


>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
          Length = 212

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = +2

Query: 152 EIIANDQGNRTTPSYVAFT-DTERL 223
           ++I N +G+RTTPS VAFT + ERL
Sbjct: 7   KVIENAEGSRTTPSVVAFTPEGERL 31


>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
          Length = 1011

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +1

Query: 370 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQK 549
           +PK K   + E+     EE  +M   ++K      LGK V+  + T    ++TL  + Q 
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713

Query: 550 MQ 555
            Q
Sbjct: 714 SQ 715


>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 665

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +1

Query: 61  LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 237
           L++ N +  ++ + R GY  L R C   R   +  +R  +  H++L      R   +RC 
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282

Query: 238 QEPGGENPNNTIFDA 282
               G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297


>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
          Length = 733

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 555 LHLLWLVFESH*STRDRDNCILHSFAEIS 469
           ++ LWL F  + S+   D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443


>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
          Length = 2990

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 20   HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 106
            HVC +V  T  K   K  ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228


>SB_16744| Best HMM Match : DUF1610 (HMM E-Value=1.6)
          Length = 130

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = -3

Query: 686 RRPRSKDKYISFSKYLFCQRPXAIAAAVGSLMNSEETFKPEDGTCIFCGLSLRVIEVRGT 507
           ++PR K K+ SFS + +  R   + +  G  ++  ET K +     FCG  L   E+   
Sbjct: 21  QQPRLKGKFYSFSLFTYAFRETGVVSKNGERIDM-ETLKRK--MLSFCGRDLTEKELANK 77

Query: 506 VITAFC 489
             T  C
Sbjct: 78  YTTPRC 83


>SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 117

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 23/69 (33%), Positives = 32/69 (46%)
 Frame = -2

Query: 321 HSSIFELTSDETFGIEYCVVGVLATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFP 142
           +S +  L +  T  +EY  +GVLATW        R + V AT     L  W L +++T  
Sbjct: 23  YSRLGVLATWSTGDLEYWRLGVLATWSTGDLEYSR-LGVLATWSTGDLEYWRLGVLAT-- 79

Query: 141 CWKTPTQEY 115
            W T   EY
Sbjct: 80  -WSTGDLEY 87


>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 201 RSQTPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCAS 326
           R+  P   S+ PP  RW+ P Q     QT H     R Y  S
Sbjct: 37  RTAEPLSHSKRPPPRRWKAPLQRCRMSQTQHGYRQGRAYTFS 78


>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
          Length = 631

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245
           IW P+   L++S     R+S +     PLR  L    P VSS +P  T
Sbjct: 42  IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89


>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
          Length = 1488

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 417  PRGSQFHGAYENEGNCRSLSRQNCAECSYHGPAYFN 524
            PRG Q    Y   G+C S+S++NC + S+     +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175


>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 977

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245
           IW P+   L++S     R+S +     PLR  L    P VSS +P  T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,661,321
Number of Sequences: 59808
Number of extensions: 555120
Number of successful extensions: 1776
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1757
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -