Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060671.seq
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 169 2e-42
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 164 5e-41
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 155 4e-38
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 155 4e-38
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 152 2e-37
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 152 2e-37
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 149 2e-36
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 147 7e-36
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 104 5e-23
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 101 5e-22
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 91 7e-19
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 91 7e-19
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 82 4e-16
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 31 0.58
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 28 5.4
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 28 5.4
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 5.4
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 28 7.2
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 27 9.5
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 27 9.5
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 27 9.5
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 169 bits (411), Expect = 2e-42
Identities = 88/143 (61%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSX-GGKPKIKVAYKGEDKTFFPEEVS 432
NP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S G KPK++V YKGE+K F PEE+S
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 433 SMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAA 612
SMVL KMKETAEA+LG TV++AV+TVP + + K +GLNV INEPTAA
Sbjct: 122 SMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNV-LRIINEPTAA 180
Query: 613 AIAYGL*QKRYLENEMYLSFDLG 681
AIAYGL +K + E + L FDLG
Sbjct: 181 AIAYGLDKKGHGERNV-LIFDLG 202
Score = 121 bits (291), Expect = 6e-28
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 254 RTP 262
P
Sbjct: 61 MNP 63
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 164 bits (399), Expect = 5e-41
Identities = 86/143 (60%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSX-GGKPKIKVAYKGEDKTFFPEEVS 432
NP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S G KPK++V YKGE+K F PEE+S
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 433 SMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAA 612
SMVL KMK+TAEA+L TV++AV+TVP + + K +GLNV INEPTAA
Sbjct: 122 SMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNV-LRIINEPTAA 180
Query: 613 AIAYGL*QKRYLENEMYLSFDLG 681
AIAYGL +K + E + L FDLG
Sbjct: 181 AIAYGLDKKGHGERNV-LIFDLG 202
Score = 121 bits (291), Expect = 6e-28
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 254 RTP 262
P
Sbjct: 61 MNP 63
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 155 bits (375), Expect = 4e-38
Identities = 80/148 (54%), Positives = 101/148 (68%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFIN 597
PEE+S+MVL KMKETAE YLG TV++AVITVP + + K +GLN + IN
Sbjct: 116 PEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLN-AIRIIN 174
Query: 598 EPTAAAIAYGL*QKRYLENEMYLSFDLG 681
EPTAAA+AYGL K + + L FDLG
Sbjct: 175 EPTAAALAYGL-DKGIQDEKNVLIFDLG 201
Score = 110 bits (264), Expect = 1e-24
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP 262
R P
Sbjct: 61 RNP 63
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 155 bits (375), Expect = 4e-38
Identities = 80/148 (54%), Positives = 101/148 (68%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFIN 597
PEE+S+MVL KMKETAE YLG TV++AVITVP + + K +GLN + IN
Sbjct: 116 PEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLN-AIRIIN 174
Query: 598 EPTAAAIAYGL*QKRYLENEMYLSFDLG 681
EPTAAA+AYGL K + + L FDLG
Sbjct: 175 EPTAAALAYGL-DKGIQDEKNVLIFDLG 201
Score = 110 bits (264), Expect = 1e-24
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP 262
R P
Sbjct: 61 RNP 63
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 152 bits (369), Expect = 2e-37
Identities = 81/142 (57%), Positives = 97/142 (68%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615
MVL KMKE AE+YLGK V+NAV+TVP + + K +GLNV INEPTAAA
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNV-VRIINEPTAAA 211
Query: 616 IAYGL*QKRYLENEMYLSFDLG 681
IAYGL +K N L FDLG
Sbjct: 212 IAYGLDKKDGERN--ILVFDLG 231
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/59 (72%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVARTP 262
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 152 bits (369), Expect = 2e-37
Identities = 81/142 (57%), Positives = 97/142 (68%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615
MVL KMKE AE+YLGK V+NAV+TVP + + K +GLNV INEPTAAA
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNV-VRIINEPTAAA 211
Query: 616 IAYGL*QKRYLENEMYLSFDLG 681
IAYGL +K N L FDLG
Sbjct: 212 IAYGLDKKDGERN--ILVFDLG 231
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/59 (72%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVARTP 262
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 149 bits (360), Expect = 2e-36
Identities = 77/148 (52%), Positives = 100/148 (67%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFIN 597
EE+S+MVL KMKETAEA LG +V++AVITVP + + K +GLN + IN
Sbjct: 116 AEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLN-AIRIIN 174
Query: 598 EPTAAAIAYGL*QKRYLENEMYLSFDLG 681
EPTAAA+AYGL K + + L FDLG
Sbjct: 175 EPTAAALAYGL-DKGITDEKNILIFDLG 201
Score = 109 bits (263), Expect = 1e-24
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP 262
R P
Sbjct: 61 RNP 63
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 147 bits (356), Expect = 7e-36
Identities = 79/142 (55%), Positives = 95/142 (66%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+
Sbjct: 90 NPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSA 149
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615
MVLTKMK+ AE+YLG V+NAV+TVP + + K +GLNV INEPTAAA
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNV-VRIINEPTAAA 208
Query: 616 IAYGL*QKRYLENEMYLSFDLG 681
IAYGL +K N L FDLG
Sbjct: 209 IAYGLDKKDGERN--ILVFDLG 228
Score = 94.7 bits (225), Expect = 6e-20
Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVARTP 262
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ P
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 104 bits (250), Expect = 5e-23
Identities = 59/125 (47%), Positives = 76/125 (60%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
N NT+F KRLIGR++ED VQ D+K P+++V + + K + P +V +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGD---AWVEAQGKVYSPSQVGA 146
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615
VL KMKETAE+YLG TV NAV+TVP + + K SGLNV INEPTAAA
Sbjct: 147 FVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNV-LRVINEPTAAA 205
Query: 616 IAYGL 630
+AYGL
Sbjct: 206 LAYGL 210
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 101 bits (242), Expect = 5e-22
Identities = 58/125 (46%), Positives = 75/125 (60%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSS 435
N NT+F KRLIGR++ED VQ D+K P+++V + + K + P +V +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGD---AWVEAQGKEYPPSQVGA 146
Query: 436 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAA 615
VL KMKETAE+YLG TV N V+TVP + + K SGLNV INEPTAAA
Sbjct: 147 FVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNV-LRVINEPTAAA 205
Query: 616 IAYGL 630
+AYGL
Sbjct: 206 LAYGL 210
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 247
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQ 86
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 91.1 bits (216), Expect = 7e-19
Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Frame = +1
Query: 265 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSXGGKPKIKVAYKGEDKTFFPEEVSSMV 441
N++FD KR+IGR+++D +Q DM WPF+V G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 442 LTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAAIA 621
L +K AE LG V++AVITVP + + + +GL V +NEPTAAAIA
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKV-LRILNEPTAAAIA 179
Query: 622 YGL*QKRYLENEMYLSFDLG 681
Y L +R L L +DLG
Sbjct: 180 YSLKGQR-LSRRNILIYDLG 198
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVARTPT 265
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 266 TQYSMPNV 289
+ + + +
Sbjct: 62 SLFDVKRI 69
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 91.1 bits (216), Expect = 7e-19
Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Frame = +1
Query: 265 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSXGGKPKIKVAYKGEDKTFFPEEVSSMV 441
N++FD KR+IGR+++D +Q DM WPF+V G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 442 LTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAAIA 621
L +K AE LG V++AVITVP + + + +GL V +NEPTAAAIA
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKV-LRILNEPTAAAIA 179
Query: 622 YGL*QKRYLENEMYLSFDLG 681
Y L +R L L +DLG
Sbjct: 180 YSLKGQR-LSRRNILIYDLG 198
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVARTPT 265
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 266 TQYSMPNV 289
+ + + +
Sbjct: 62 SLFDVKRI 69
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 81.8 bits (193), Expect = 4e-16
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEV-VSXGGKPKIKVAYKGEDKTFFPEE 426
NP TI+DAKR IGR FE + +D K +PF++ + GK ++ K +PEE
Sbjct: 94 NPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEE 153
Query: 427 VSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPT 606
+ S+++ +K A +LG T+ VI+ P K + + I+EPT
Sbjct: 154 IGSLIIGYLKSAAAKHLGVTLGQVVISCP-AEFNEKQRNFTAKAAEIAEMEVRRVISEPT 212
Query: 607 AAAIAYGL*QKRYLENEMYLSFDLG 681
AAA+AYGL +K+ +EN + + DLG
Sbjct: 213 AAALAYGLHKKQGVENVVVV--DLG 235
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 65 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 229
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 230 DAAKNQVARTP 262
A Q P
Sbjct: 85 TRATEQQEHNP 95
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 76.2 bits (179), Expect = 2e-14
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Frame = +1
Query: 139 AREGGDHRQRPGQQDHSVLCCVH---RHRASHRRCRQEPGGENPNNTIFDAKRLIGRKFE 309
AR+GG H+ CV + R+ RQ N NT+ + K LIGRKF
Sbjct: 18 ARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVT-TNIKNTVINFKHLIGRKFS 76
Query: 310 DATVQADMKHWPFEVVSXGGKP-KIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLG-- 480
D Q + P +VV ++V+Y GE TF PE+V + +LTK++ E+ L
Sbjct: 77 DPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLTKLRTIVESQLSDV 136
Query: 481 KTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAAIAYGL 630
K V + V+ VP ++ + + +GLN S +NE TA A+AYG+
Sbjct: 137 KKVSDCVLAVPSYFTDVQRRAVLSAIQYAGLN-SLRIVNETTAIALAYGI 185
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 250
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAV 56
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 47.6 bits (108), Expect = 8e-06
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +1
Query: 289 LIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 468
+I RK D K +PF K V + +++ + E + +M+L K+ E
Sbjct: 80 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKT-VVFPYKEEKYNVETLLAMILWNAKKVTE 138
Query: 469 AYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAAIAYGL*QKRYL 648
AY +TV++ VITVP + + +GLN+ + +N+ +AAA+ YG+ +++ +
Sbjct: 139 AYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNL-LQLLNDGSAAALNYGVFRRKEI 197
Query: 649 ENE--MYLSFDLG 681
+ L +D+G
Sbjct: 198 TEKPTHMLIYDMG 210
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 47.6 bits (108), Expect = 8e-06
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Frame = +1
Query: 289 LIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 468
+I RK D K +PF K V + +++ + E + +M+L K+ E
Sbjct: 96 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKT-VVFPYKEEKYNVETLLAMILWNAKKVTE 154
Query: 469 AYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAAIAYGL*QKRYL 648
AY +TV++ VITVP + + +GLN+ + +N+ +AAA+ YG+ +++ +
Sbjct: 155 AYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNL-LQLLNDGSAAALNYGVFRRKEI 213
Query: 649 ENE--MYLSFDLG 681
+ L +D+G
Sbjct: 214 TEKPTHMLIYDMG 226
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Frame = +1
Query: 289 LIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 468
L+G+ + + + + F V K + +K +++ E +++M+L K+ E
Sbjct: 94 LVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMILANAKKFTE 153
Query: 469 AYL-GKTVQNAVITVPRTSMTLKDKPQKMQVPSSGLNVSSEFINEPTAAAIAYGL*QKRY 645
Y +++ VITVP + + +GL V + IN+ TAAA+++G+ +++
Sbjct: 154 EYAQAAEIKDVVITVPVYFTPAERLAVERAAQMAGLTVL-QLINDGTAAALSHGIFRRKE 212
Query: 646 L--ENEMYLSFDLG 681
+ + + + +D+G
Sbjct: 213 IGEKPQRLMVYDMG 226
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTP 262
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA R P
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYP 84
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 268 CCWGSRHLVLGGISDETLGVCERNIRRSGPVA 173
CC G+ H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +1
Query: 268 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSXGGKPKIKVAYKGEDKTFFPEEVSSMVLT 447
T+ AKR I R E T+++D PF +++ +K A K +D+ + ++L
Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260
Query: 448 KMKETAEAYLGKTVQN 495
KE+++ K ++N
Sbjct: 261 IQKESSQLRKRKEIEN 276
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 205 HRHRASHRR--CRQEPGGENPNNTIFDAKRLIGR-KFEDATVQADM 333
H+HR SHR Q+ G+ NN + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 144 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 245
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 381 DLRFASXTDNLERPVLHVGLHSSIFELTSDETFGIEY 271
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 230 DAAKNQVARTPTTQYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 382
D ++NQ+ R P MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 230 DAAKNQVARTPTTQYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 382
D ++NQ+ R P MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 230 DAAKNQVARTPTTQYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 382
D ++NQ+ R P MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,168,342
Number of Sequences: 27780
Number of extensions: 389512
Number of successful extensions: 1357
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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