Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060670.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   1.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.9  
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    24   5.1  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   5.1  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 90  IQQHSNRNKSSAPSEFNSKCRHCRRCASNGGRAVTKI 200
           +Q H N +  + P     +C+HC  C +  G  +  I
Sbjct: 170 LQNHVNTHTGTKPH----RCKHCDNCFTTSGELIRHI 202


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 259  SENNCYSPFKWIFPST 306
            S NNC++P KW + S+
Sbjct: 2756 SANNCWNPLKWDWRSS 2771


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +1

Query: 346 GIILMTMATTSGLSSYSSCLPVPVRKIQTSKKLVLECLRLYQ 471
           G IL+ +A     +  +   P P+R+   +++L+ EC  LY+
Sbjct: 66  GAILIYLAEQYAPAGTTYYPPDPLRRAIVNQRLLFECGTLYK 107


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 454 ILIPASLMFGSCALAQVNM 398
           + +P +L+FGS  L Q+N+
Sbjct: 341 VSLPGTLLFGSANLTQLNL 359



 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 475 YLEIVRLKTWMYKRHVNIWLCSQ 543
           Y   + LK W++K  + +WL ++
Sbjct: 866 YTYKLELKVWLFKHGLCLWLVAE 888


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,431
Number of Sequences: 2352
Number of extensions: 14466
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)