Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060669.seq
(690 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 33 0.003
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 33 0.003
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.032
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.39
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.39
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.51
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.2
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 4.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 4.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 4.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 4.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.3
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 6.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 6.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.3
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 8.4
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.4
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 8.4
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 73 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 168
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 339 FLINLIDSPGHVDFSSEVTAALRVTDGAL 425
+ + +ID+PGH DF + D A+
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 73 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 168
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 339 FLINLIDSPGHVDFSSEVTAALRVTDGAL 425
+ + +ID+PGH DF + D A+
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 0.032
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 100 MSVIAHVDHGKSTLTDSL 153
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 330 EKGFLINLIDSPGHVDFSSEVTAALRVTD 416
E G + +D+PGH F S +TD
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITD 218
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.8 bits (54), Expect = 0.39
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 436 TVCLVCVYKPKQYCVRLLP 492
TV LVC+Y PK Y + P
Sbjct: 749 TVTLVCLYSPKIYIILFQP 767
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.8 bits (54), Expect = 0.39
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 436 TVCLVCVYKPKQYCVRLLP 492
TV LVC+Y PK Y + P
Sbjct: 839 TVTLVCLYSPKIYIILFQP 857
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.51
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 97 NMSVIAHVDHGKSTLTDSL 153
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 339 FLINLIDSPGHVDFSSEVTAALRVTDGAL 425
+ + +ID+PGH DF + D A+
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAV 40
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 339 FLINLIDSPGHVDFSSEVTAALRVTDGAL 425
+ + +ID+PGH DF + D A+
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAV 56
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 85 LSNNYNYNNYNNNYKPLYYNINYI 108
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 85 LSNNYNYNNYNNNYKPLYYNINYI 108
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 85 LSNNYNYNNYNNNYKPLYYNINYI 108
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 85 LSNNYNYNNYNNNYKPLYYNINYI 108
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 318 LSNNYNYNNYNNNYKPLYYNINYI 341
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 318 LSNNYNYNNYNNNYKPLYYNINYI 341
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 318 LSNNYNYNNYNNNYKPLYYNINYI 341
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 307 LSNNYNYNNYNNNYKPLYYNINYI 330
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 258 ISMFFELEEKDLVFITNPDQREKSEKGFLI 347
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 33 SKCEFHGRRDPWDDG 77
SK E HG + W DG
Sbjct: 360 SKYELHGLKFQWTDG 374
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 442 TQSTTTRAP-SVTRSAAVTSEEKSTC 368
+ STTT +P + T+S V + STC
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 258 ISMFFELEEKDLVFITNPDQREKSEKGFLI 347
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 648 ECVSTLAKGSVGFG 689
+CV+ L G VGFG
Sbjct: 408 DCVTLLFSGIVGFG 421
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 540 LSSNLKLKNYTRRFQRIVENVNVI 611
LS+N NY ++ + N+N I
Sbjct: 318 LSNNYNYNNYNNNYKPLHYNINYI 341
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 232 RCITIKSTPSLCSSS 276
+C T++ TPS CS +
Sbjct: 354 KCNTLERTPSKCSQT 368
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 648 ECVSTLAKGSVGFG 689
+CV+ L G VGFG
Sbjct: 408 DCVTLLFSGIVGFG 421
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 8.4
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +1
Query: 436 TVCLVCVYKPKQYCVRLLP 492
+V + C++ PK Y + + P
Sbjct: 891 SVTIACLFSPKLYIILIRP 909
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,483
Number of Sequences: 438
Number of extensions: 4298
Number of successful extensions: 33
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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