Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060667.seq
(635 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GU68 Cluster: Eukaryotic translation initiation facto... 120 4e-26
UniRef50_P63241 Cluster: Eukaryotic translation initiation facto... 118 1e-25
UniRef50_UPI0001552E45 Cluster: PREDICTED: similar to initiation... 113 3e-24
UniRef50_Q20751 Cluster: Eukaryotic translation initiation facto... 108 1e-22
UniRef50_Q86DY5 Cluster: Clone ZZZ427 mRNA sequence; n=2; Bilate... 104 2e-21
UniRef50_Q4WK14 Cluster: Eukaryotic translation initiation facto... 103 3e-21
UniRef50_P80639 Cluster: Eukaryotic translation initiation facto... 101 1e-20
UniRef50_P34563 Cluster: Eukaryotic translation initiation facto... 98 1e-19
UniRef50_Q5ZF92 Cluster: Eukaryotic translation initiation facto... 94 3e-18
UniRef50_Q8LSN0 Cluster: Translation initiation factor 5A; n=2; ... 90 4e-17
UniRef50_Q249P9 Cluster: Translation initiation factor eIF-5A fa... 88 2e-16
UniRef50_Q8MX76 Cluster: Eukaryotic translation initiation facto... 83 4e-15
UniRef50_A0DV26 Cluster: Chromosome undetermined scaffold_65, wh... 76 6e-13
UniRef50_Q4QA21 Cluster: Eukaryotic initiation factor 5a, putati... 74 3e-12
UniRef50_Q98RY8 Cluster: Translation initiation factor eIF-5A.2;... 73 6e-12
UniRef50_A2DEK5 Cluster: Translation initiation factor eIF-5A fa... 65 2e-09
UniRef50_Q02217 Cluster: Putative uncharacterized protein YEL034... 64 3e-09
UniRef50_UPI0000498A83 Cluster: translation initiation factor eI... 63 6e-09
UniRef50_Q9YA53 Cluster: Translation initiation factor 5A; n=3; ... 63 6e-09
UniRef50_Q7QR21 Cluster: GLP_576_14492_14043; n=1; Giardia lambl... 59 8e-08
UniRef50_Q2TWV6 Cluster: Translation initiation factor 5A; n=1; ... 57 3e-07
UniRef50_P56635 Cluster: Translation initiation factor 5A; n=15;... 56 5e-07
UniRef50_A0RUN7 Cluster: Translation elongation factor P (EF-P)/... 47 3e-04
UniRef50_O29612 Cluster: Translation initiation factor 5A; n=7; ... 47 4e-04
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 46 8e-04
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_Q8U1E4 Cluster: Translation initiation factor 5A; n=7; ... 46 0.001
UniRef50_A3BI23 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_Q2FQ93 Cluster: Translation initiation factor 5A; n=4; ... 44 0.003
UniRef50_Q6L150 Cluster: Translation initiation factor 5A; n=4; ... 44 0.004
UniRef50_Q9HP78 Cluster: Translation initiation factor 5A; n=5; ... 42 0.009
UniRef50_A0ECS4 Cluster: Chromosome undetermined scaffold_9, who... 42 0.012
UniRef50_Q2U2G6 Cluster: Predicted protein; n=1; Aspergillus ory... 42 0.016
UniRef50_Q5LR08 Cluster: Putative uncharacterized protein; n=1; ... 40 0.050
UniRef50_P87252 Cluster: Woronin body major protein precursor; n... 40 0.050
UniRef50_Q5YEV5 Cluster: Translation initiation factor 5A; n=1; ... 39 0.088
UniRef50_Q74N24 Cluster: Translation initiation factor 5A; n=2; ... 39 0.12
UniRef50_Q6LYN8 Cluster: Translation initiation factor 5A; n=5; ... 38 0.15
UniRef50_Q01GB7 Cluster: NHL repeat; n=2; Ostreococcus|Rep: NHL ... 36 0.62
UniRef50_Q9UW16 Cluster: Vacuolar-ATPase; n=3; Sordariomycetes|R... 36 1.1
>UniRef50_Q9GU68 Cluster: Eukaryotic translation initiation factor
5A; n=4; Coelomata|Rep: Eukaryotic translation
initiation factor 5A - Drosophila melanogaster (Fruit
fly)
Length = 159
Score = 120 bits (288), Expect = 4e-26
Identities = 70/158 (44%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +2
Query: 44 MGDIEDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHL 223
M +++D FET DSG S T+PMQCS LRKNGF ML RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 224 VGIXXFNGKKLKISVPPHTTWXYPTXSAKTTN*LISRMMAT*X*XLTTVTCVRTS-KFRM 400
VGI F+ KK + P P + LI+ + +T +R K
Sbjct: 60 VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQ-LIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 401 VTSAHXCVLTSTAARNCCAPWLKSCGEECVIAVKAKNS 514
L + ++ LK+CGEECVIA+K +
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTA 156
Score = 107 bits (258), Expect = 2e-22
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K EDICPSTH M VP+VKRED QL ISDD +L L ++GDLR DLK+P+G+LG LR D
Sbjct: 69 KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128
Query: 430 FDSGKELLCTV 462
FDSGK+LLCTV
Sbjct: 129 FDSGKDLLCTV 139
>UniRef50_P63241 Cluster: Eukaryotic translation initiation factor
5A-1; n=75; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Homo sapiens (Human)
Length = 154
Score = 118 bits (284), Expect = 1e-25
Identities = 54/72 (75%), Positives = 58/72 (80%)
Frame = +2
Query: 56 EDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIX 235
+D FETGD+G S TFPMQCS LRKNGF +L GRPCKIVEMSTSKTGKHGHAKVHLVGI
Sbjct: 3 DDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 62
Query: 236 XFNGKKLKISVP 271
F GKK + P
Sbjct: 63 IFTGKKYEDICP 74
Score = 87.4 bits (207), Expect = 3e-16
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K EDICPSTH M VP++KR D+QL I D GYL L D+G++R DL++P+GDLG +
Sbjct: 68 KYEDICPSTHNMDVPNIKRNDFQLIGIQD-GYLSLLQDSGEVREDLRLPEGDLGKEIEQK 126
Query: 430 FDSGKELLCTV 462
+D G+E+L TV
Sbjct: 127 YDCGEEILITV 137
>UniRef50_UPI0001552E45 Cluster: PREDICTED: similar to initiation
factor 4D; n=2; Mus musculus|Rep: PREDICTED: similar to
initiation factor 4D - Mus musculus
Length = 357
Score = 113 bits (272), Expect = 3e-24
Identities = 52/72 (72%), Positives = 56/72 (77%)
Frame = +2
Query: 56 EDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIX 235
+D FETGD+G S TFPMQCS LRKNGF +L G PCKIVEMSTSKTGKHGHAKVHLVG
Sbjct: 3 DDLDFETGDAGPSATFPMQCSALRKNGFVVLKGGPCKIVEMSTSKTGKHGHAKVHLVGTD 62
Query: 236 XFNGKKLKISVP 271
F GKK + P
Sbjct: 63 IFTGKKYEDICP 74
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/71 (49%), Positives = 51/71 (71%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K EDICPSTH M VP++KR ++QL I + GYL L ++ ++R DL++P+GDLG +
Sbjct: 68 KYEDICPSTHNMDVPNIKRNNFQLVGIQN-GYLSLLQNSEEVREDLRLPEGDLGKEIEQK 126
Query: 430 FDSGKELLCTV 462
+D G+E+L TV
Sbjct: 127 YDCGEEILITV 137
>UniRef50_Q20751 Cluster: Eukaryotic translation initiation factor
5A-2; n=66; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-2 - Caenorhabditis elegans
Length = 161
Score = 108 bits (260), Expect = 1e-22
Identities = 49/72 (68%), Positives = 54/72 (75%)
Frame = +2
Query: 56 EDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIX 235
+D HF TGDSG + TFP QCS LRKN M+ GRPCKIVEMSTSKTGKHGHAKVH+V I
Sbjct: 7 DDEHFHTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAID 66
Query: 236 XFNGKKLKISVP 271
F KKL+ P
Sbjct: 67 IFTSKKLEDICP 78
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXL-XADNGDLR*DLKIPDGDLGTXLRT 426
K+EDICPSTH M VP VKR +Y L I DDGY L ++ + + DLK+PD +LG +R
Sbjct: 72 KLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTELGQQIRD 130
Query: 427 DF--DSGKELLCTVAEI 471
+ D G L+ V+ I
Sbjct: 131 AYEKDEGSVLVQVVSAI 147
>UniRef50_Q86DY5 Cluster: Clone ZZZ427 mRNA sequence; n=2;
Bilateria|Rep: Clone ZZZ427 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 160
Score = 104 bits (249), Expect = 2e-21
Identities = 50/89 (56%), Positives = 57/89 (64%)
Frame = +2
Query: 44 MGDIEDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHL 223
M ED F TG+SG S T P QCS LRK G+ ++ RPCKI+EMSTSKTGKHG AKVHL
Sbjct: 1 MSTFEDEEFATGESGASKTEPKQCSLLRKGGYVLMKERPCKIMEMSTSKTGKHGSAKVHL 60
Query: 224 VGIXXFNGKKLKISVPPHTTWXYPTXSAK 310
VGI F GKK + P T P + K
Sbjct: 61 VGIDIFTGKKYEEICPSSQTMYVPIIARK 89
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K E+ICPS+ M VP + R++YQL D+ DG+L L +D+ + ++ +PD D+G ++
Sbjct: 70 KYEEICPSSQTMYVPIIARKEYQLIDVK-DGFLSLMSDDFCVLENIPVPDNDVGKEIQEK 128
Query: 430 FDS 438
++S
Sbjct: 129 WNS 131
>UniRef50_Q4WK14 Cluster: Eukaryotic translation initiation factor
eIF-5A; n=5; Dikarya|Rep: Eukaryotic translation
initiation factor eIF-5A - Aspergillus fumigatus
(Sartorya fumigata)
Length = 192
Score = 103 bits (248), Expect = 3e-21
Identities = 45/75 (60%), Positives = 57/75 (76%)
Frame = +2
Query: 35 NTTMGDIEDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAK 214
+T + + FE+ D+G S T+PMQCS LRKNG ++ GRPCKIV+MSTSKTGKHGHAK
Sbjct: 32 STDICSFQHETFESADAGASATYPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAK 91
Query: 215 VHLVGIXXFNGKKLK 259
VH+V + F GKKL+
Sbjct: 92 VHIVALDIFTGKKLE 106
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/72 (43%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K+ED+ PSTH M VP+V R +YQL D++DDG+L L + G+ + D+K+P+G++G ++
Sbjct: 104 KLEDLSPSTHNMDVPNVTRREYQLLDVTDDGFLSLMDEAGNTKDDVKLPEGEVGERIQKM 163
Query: 430 F-DSGKELLCTV 462
F + GK+ T+
Sbjct: 164 FNEEGKDCNVTI 175
>UniRef50_P80639 Cluster: Eukaryotic translation initiation factor
5A; n=58; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A - Zea mays (Maize)
Length = 160
Score = 101 bits (243), Expect = 1e-20
Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +2
Query: 44 MGDIEDTHFET-GDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVH 220
M D E+ HFE+ D+G S T+P Q +RKNGF ++ RPCK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 221 LVGIXXFNGKKLKISVP 271
V I FNGKKL+ VP
Sbjct: 61 FVAIDIFNGKKLEDIVP 77
Score = 73.3 bits (172), Expect = 4e-12
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIP-DGDLGTXLRT 426
K+EDI PS+H +PHV R +YQL DIS+DG++ L +G+ + DL++P D L ++
Sbjct: 71 KLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKE 130
Query: 427 DFDSGKELLCTV 462
F+SGK+L+ TV
Sbjct: 131 GFESGKDLVVTV 142
>UniRef50_P34563 Cluster: Eukaryotic translation initiation factor
5A-1; n=5; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Caenorhabditis elegans
Length = 161
Score = 98.3 bits (234), Expect = 1e-19
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +2
Query: 56 EDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIX 235
++ F++ +SG + TFP QCS LRKN M+ GRPCKIVEMSTSKTGKHGHAKVH+V I
Sbjct: 7 DEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAID 66
Query: 236 XFNGKKLKISVP 271
F KKL+ P
Sbjct: 67 IFTTKKLEDICP 78
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLR-- 423
K+EDICPSTH M VP VKR +Y L I D + ++ +L+ DLK+P+GDLG +R
Sbjct: 72 KLEDICPSTHNMDVPVVKRREYILMSIEDGFCSLMDPESCELKDDLKMPEGDLGNTIREA 131
Query: 424 TDFDSGKELLCTVA 465
+ D G L+ VA
Sbjct: 132 LEKDEGSVLVQVVA 145
>UniRef50_Q5ZF92 Cluster: Eukaryotic translation initiation factor
5A-1; n=2; Eukaryota|Rep: Eukaryotic translation
initiation factor 5A-1 - Plantago major (Common
plantain)
Length = 159
Score = 93.9 bits (223), Expect = 3e-18
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +2
Query: 56 EDTHFET-GDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGI 232
E+ FE D+G S TFP Q +RKNG+ + RPCK+VE+STSKTGKHGHAK H V I
Sbjct: 4 EEHQFEAQADAGASKTFPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHFVAI 63
Query: 233 XXFNGKKLKISVP 271
FNGKKL+ VP
Sbjct: 64 DIFNGKKLEDIVP 76
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGD-LGTXLRT 426
K+EDI PS+H VPHV R DYQL DIS+DG++ L DNG + DL++P D L T ++
Sbjct: 70 KLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDDALATQIKE 129
Query: 427 DFDSGKELLCTV 462
F GK+L+ +V
Sbjct: 130 GFAEGKDLVVSV 141
>UniRef50_Q8LSN0 Cluster: Translation initiation factor 5A; n=2;
Alveolata|Rep: Translation initiation factor 5A -
Crypthecodinium cohnii (Dinoflagellate)
Length = 162
Score = 90.2 bits (214), Expect = 4e-17
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +2
Query: 56 EDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIX 235
ED FE+ D+G S T+P Q +RK + M+ GRPCK +E+STSKTGKHGHAK H+V +
Sbjct: 4 EDHTFESTDAGASATYPQQAGEIRKGSYLMIKGRPCKCIEVSTSKTGKHGHAKAHIVALD 63
Query: 236 XFNGKKLKISVP 271
F+GKK + P
Sbjct: 64 IFSGKKYEDLCP 75
Score = 37.5 bits (83), Expect = 0.27
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIP 396
K ED+CP++H + VP VKR +Y LT DG L D + DL +P
Sbjct: 69 KYEDLCPTSHNLDVPFVKRTEYLLT---ADGTLARACDGH--KDDLNLP 112
>UniRef50_Q249P9 Cluster: Translation initiation factor eIF-5A
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor eIF-5A family protein -
Tetrahymena thermophila SB210
Length = 184
Score = 87.8 bits (208), Expect = 2e-16
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +2
Query: 56 EDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIX 235
++ +F+ G++G S T+PMQ ++KNG+ ML G PCK+ EM+T K GKHGHAK ++G+
Sbjct: 3 DEENFQQGEAGSSYTYPMQAGNIKKNGYAMLRGFPCKVTEMTTCKAGKHGHAKATIIGVD 62
Query: 236 XFNGKKLKISVP 271
F G+K + S P
Sbjct: 63 IFTGRKYEDSCP 74
Score = 55.6 bits (128), Expect = 9e-07
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR 378
K ED CP++H M +P VK+++YQL +I+DD YL L +NG+ +
Sbjct: 68 KYEDSCPTSHNMEIPFVKKQEYQLMNIADDNYLTLLLENGETK 110
>UniRef50_Q8MX76 Cluster: Eukaryotic translation initiation factor
5A; n=13; Alveolata|Rep: Eukaryotic translation
initiation factor 5A - Plasmodium falciparum
Length = 161
Score = 83.4 bits (197), Expect = 4e-15
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = +2
Query: 68 FETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNG 247
++ D+G S T+P+Q ++KNG ML PCK+V+ STSKTGKHGHAK H+VGI F G
Sbjct: 7 YDNIDAGASQTYPVQAGAIKKNGHVMLKEHPCKVVDYSTSKTGKHGHAKAHIVGIDIFTG 66
Query: 248 KKLKISVP 271
+K + P
Sbjct: 67 RKYEDICP 74
Score = 70.1 bits (164), Expect = 4e-11
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIP---DGDL---G 411
K EDICP++H M VP VKR + QL DI++DG++ L DNGD + DL +P +G+L
Sbjct: 68 KYEDICPTSHNMDVPVVKRTELQLIDITEDGFVSLLYDNGDTKDDLSLPKDTEGNLDEVA 127
Query: 412 TXLRTDFDSGKELLCTV 462
+R FD+GK +L +V
Sbjct: 128 KQIRNLFDNGKSVLVSV 144
>UniRef50_A0DV26 Cluster: Chromosome undetermined scaffold_65, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_65,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 161
Score = 76.2 bits (179), Expect = 6e-13
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 56 EDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIX 235
++ FE G++G S T+ L+K G+ ML G PCKI ++STSK GKHGHAK +VG
Sbjct: 4 DENQFEQGNAGSSHTYTESAGSLKKGGYVMLKGHPCKITDVSTSKAGKHGHAKASIVGKD 63
Query: 236 XFNGKKLKISVP 271
F K + S P
Sbjct: 64 IFTNKTYEDSAP 75
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Frame = +1
Query: 256 EDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIP----DGDLGTXLR 423
ED P++H + VP V +++Y L DI DG++ L ++G + DLK+P D +L +R
Sbjct: 71 EDSAPTSHNIDVPFVTKKEYTLMDIQGDGFVILMNEDGSTKEDLKLPETEDDFNLVKEIR 130
Query: 424 TDFDSGKELLCTV 462
FD+GK+LL +V
Sbjct: 131 EMFDAGKDLLISV 143
>UniRef50_Q4QA21 Cluster: Eukaryotic initiation factor 5a, putative;
n=8; Trypanosomatidae|Rep: Eukaryotic initiation factor
5a, putative - Leishmania major
Length = 166
Score = 74.1 bits (174), Expect = 3e-12
Identities = 30/71 (42%), Positives = 43/71 (60%)
Frame = +2
Query: 59 DTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXX 238
D + G S T+P+ L+K G+ + GRPCK++++S SKTGKHGHAKV +V
Sbjct: 7 DFSHQGGGDNASKTYPLPAGALKKGGYVCINGRPCKVIDLSVSKTGKHGHAKVSIVATDI 66
Query: 239 FNGKKLKISVP 271
F G +L+ P
Sbjct: 67 FTGNRLEDQAP 77
Score = 52.4 bits (120), Expect = 9e-06
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDD------GYLXLXADNGDLR*DLKI-PDGDL 408
++ED PSTH + VP VK Y + DI + +L L D G+ R DL + PD L
Sbjct: 71 RLEDQAPSTHNVEVPFVKTFTYSVLDIQPNEDSSLPSHLSLMDDEGESREDLDMPPDAAL 130
Query: 409 GTXLRTDFDSGKELLCTVAEIL 474
++ FDSGKE+L V +
Sbjct: 131 AAQIKEQFDSGKEVLVVVVSAM 152
>UniRef50_Q98RY8 Cluster: Translation initiation factor eIF-5A.2;
n=1; Guillardia theta|Rep: Translation initiation factor
eIF-5A.2 - Guillardia theta (Cryptomonas phi)
Length = 158
Score = 72.9 bits (171), Expect = 6e-12
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +2
Query: 80 DSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLK 259
D+G S T P++ +K G ++ G PCKI+++STSKTGKHGHAK + + F GKK +
Sbjct: 11 DNGASETTPIKAGNCKKGGLLVIKGNPCKIIDISTSKTGKHGHAKAIITAVDIFTGKKYQ 70
Query: 260 ISVP 271
S P
Sbjct: 71 ESAP 74
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/78 (28%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLK--IPDGDLGTXLR 423
K ++ P++H + P++ + +YQL I +DG++ L ++G++R DL + + ++ ++
Sbjct: 68 KYQESAPTSHNLDQPNLTKTEYQLIHIEEDGFVSLMDEDGNIREDLSLDLKNDEIHVKIK 127
Query: 424 TDFDSGKELLCTVAEILR 477
+FD KE++ TV + L+
Sbjct: 128 NEFDQSKEIVVTVMKCLQ 145
>UniRef50_A2DEK5 Cluster: Translation initiation factor eIF-5A
family protein; n=2; Trichomonas vaginalis G3|Rep:
Translation initiation factor eIF-5A family protein -
Trichomonas vaginalis G3
Length = 167
Score = 64.9 bits (151), Expect = 2e-09
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +2
Query: 59 DTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXX 238
D + D+G + + L+K G+ ++ GRPC++V+++ SKTGKHGHAK + G
Sbjct: 11 DLEIQEVDAGSQEKATIPVNKLKKGGYVLIEGRPCRVVDITKSKTGKHGHAKAGIAGTDL 70
Query: 239 FNGKKLKISVP 271
F G++ + +P
Sbjct: 71 FTGRRYETHLP 81
>UniRef50_Q02217 Cluster: Putative uncharacterized protein
YEL034C-A; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YEL034C-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 200
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/78 (44%), Positives = 44/78 (56%)
Frame = -2
Query: 274 WRDRYLQLFTIEXXNPNQVNFSVXVLSGFGCGHFNNLAWTTXQHXETVFTQXRTLHGEGX 95
WR + QL T E N NQ++FSV VL+ GH +NL W+T ETV +Q RTLH G
Sbjct: 106 WRQIF-QLLTSEDINGNQMDFSVTVLTSLRSGHVDNLTWSTLDDNETVLSQGRTLHWVGG 164
Query: 94 *XPGVSGLEVCVFDVTHC 41
VS + +F V HC
Sbjct: 165 GGTSVSSFK-GMFFVRHC 181
>UniRef50_UPI0000498A83 Cluster: translation initiation factor
eIF-5A; n=2; Entamoeba histolytica HM-1:IMSS|Rep:
translation initiation factor eIF-5A - Entamoeba
histolytica HM-1:IMSS
Length = 165
Score = 62.9 bits (146), Expect = 6e-09
Identities = 29/66 (43%), Positives = 36/66 (54%)
Frame = +2
Query: 98 TFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVPPH 277
T P + L+ GF ++ PCKI E + +K GKHGHAKV L GI F GKK P H
Sbjct: 29 TIPTKAGSLKVGGFVVIGTFPCKITEFNKTKDGKHGHAKVTLTGIDVFTGKKYTDCCPAH 88
Query: 278 TTWXYP 295
+ P
Sbjct: 89 SNVDVP 94
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K D CP+ + VP +KR +Y L DI DDGYL L ++G +R D+K+P +LG + +
Sbjct: 80 KYTDCCPAHSNVDVPVIKRVEYSLQDI-DDGYLTLLDEDGTVRSDIKLPKNELGKEIEHE 138
Query: 430 FDSGKELLCTV 462
F+ K L+C +
Sbjct: 139 FNE-KSLICII 148
>UniRef50_Q9YA53 Cluster: Translation initiation factor 5A; n=3;
Archaea|Rep: Translation initiation factor 5A -
Aeropyrum pernix
Length = 139
Score = 62.9 bits (146), Expect = 6e-09
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +2
Query: 122 LRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVPPHTTWXYP 295
L+K + ++ G PC+IVEMS +KTGKHG AK H+V I F+G+K + P T P
Sbjct: 11 LKKGSYIVIDGEPCRIVEMSRAKTGKHGSAKAHVVAICVFSGQKKSLVAPVDTRVQIP 68
>UniRef50_Q7QR21 Cluster: GLP_576_14492_14043; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_576_14492_14043 - Giardia lamblia
ATCC 50803
Length = 149
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 101 FPMQCSXLRKNGFXMLXGR-PCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVP 271
+P Q L+K + ++ PCK+ E+STSKTGKHGHAK + + F GKK + S P
Sbjct: 9 YPKQAGNLKKGDYIVMKDVFPCKVTEISTSKTGKHGHAKCSITAVDIFTGKKYEDSCP 66
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K ED CPS+H + P+V R DY L +I D+ ++ + + L + + +L LR
Sbjct: 60 KYEDSCPSSHNIMCPNVSRTDYLLINIDDEYAFYFDQNDAEQQVRLPLENEELVADLRAA 119
Query: 430 FDSGKELL 453
F++G + +
Sbjct: 120 FEAGDKTI 127
>UniRef50_Q2TWV6 Cluster: Translation initiation factor 5A; n=1;
Aspergillus oryzae|Rep: Translation initiation factor 5A
- Aspergillus oryzae
Length = 154
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +1
Query: 253 VEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTDF 432
+ D ST + +PHV R +Y L +I D+G+L L +G ++ ++K+P G LG + DF
Sbjct: 67 LSDDIESTQSVEIPHVYRNEYMLVNI-DEGFLNLTNQDGTMKDNVKVPGGGLGQQIEQDF 125
Query: 433 DSGKELLCTV 462
++G +LL V
Sbjct: 126 EAGTDLLIAV 135
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 59 DTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKH 202
D FE S T+ S L K ++ GRPCKI+E+S T H
Sbjct: 8 DQTFEQHQQHASPTYAALVSTLTKGAHVIIRGRPCKILEISKIGTNIH 55
>UniRef50_P56635 Cluster: Translation initiation factor 5A; n=15;
Archaea|Rep: Translation initiation factor 5A -
Pyrobaculum aerophilum
Length = 138
Score = 56.4 bits (130), Expect = 5e-07
Identities = 21/55 (38%), Positives = 36/55 (65%)
Frame = +2
Query: 107 MQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVP 271
++ L++ + ++ G PC++VE+ SKTGKHG AK +V + F+G K +S+P
Sbjct: 12 VEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLP 66
>UniRef50_A0RUN7 Cluster: Translation elongation factor P
(EF-P)/translation initiation factor 5A; n=2;
Thermoprotei|Rep: Translation elongation factor P
(EF-P)/translation initiation factor 5A - Cenarchaeum
symbiosum
Length = 157
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 152 GRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKK 253
G PC+I E TSK GKHG AK +VG+ F+G+K
Sbjct: 47 GEPCRISEYDTSKPGKHGAAKARIVGVGVFDGQK 80
>UniRef50_O29612 Cluster: Translation initiation factor 5A; n=7;
Euryarchaeota|Rep: Translation initiation factor 5A -
Archaeoglobus fulgidus
Length = 128
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 122 LRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVPPHTTWXY 292
LR+ G+ ++ PC+I+ +S SK GKHG AK + I F+ +K I V P T Y
Sbjct: 10 LREGGYVVIDDEPCEILSISVSKPGKHGAAKARIDAIGIFDSQKRSI-VQPVTAKIY 65
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGY 345
K+E+ PS+H VPHV R DYQL DI +DGY
Sbjct: 256 KLENFVPSSHNCDVPHVNRIDYQLIDIPEDGY 287
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGY 345
K+E + PS+H VPHV DYQL DI +DGY
Sbjct: 381 KLEKVVPSSHNCDVPHVNGTDYQLIDILEDGY 412
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGY 345
K+E+ PS+H VPHV R DYQL DI +DGY
Sbjct: 213 KLENFVPSSHNCDVPHVNRIDYQLIDIPEDGY 244
>UniRef50_Q8U1E4 Cluster: Translation initiation factor 5A; n=7;
Euryarchaeota|Rep: Translation initiation factor 5A -
Pyrococcus furiosus
Length = 138
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 107 MQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVPPHTTW 286
+Q S L+ + ++ PC+IV ++ S GKHG AK + + F+GK I P
Sbjct: 7 VQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEV 66
Query: 287 XYPTXSAKT 313
P +T
Sbjct: 67 DVPIIDKRT 75
>UniRef50_A3BI23 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 175
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +1
Query: 295 HVKREDYQLTDISDDG-YLXLXADNGDLR*DLKIPDGD-LGTXLRTDFDSGKELLCTV 462
H+ R +YQL DIS+DG ++ L ++G+ + DL +P D L ++T F GK+++ TV
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTV 103
>UniRef50_Q2FQ93 Cluster: Translation initiation factor 5A; n=4;
Euryarchaeota|Rep: Translation initiation factor 5A -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 127
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 122 LRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVP 271
L++ + ++ PCKI+ +S SK GKHG AK L + F+G K I P
Sbjct: 10 LKEGKYLLVDDEPCKILSISVSKPGKHGAAKARLDVVGIFDGVKRSIVQP 59
>UniRef50_Q6L150 Cluster: Translation initiation factor 5A; n=4;
Thermoplasmatales|Rep: Translation initiation factor 5A
- Picrophilus torridus
Length = 129
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 122 LRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVP 271
L+ + ++ PC+IV+++ SK GKHG AK +V I F+ +K + P
Sbjct: 11 LKVGRYILIDDSPCRIVDITMSKPGKHGEAKGRIVAIGVFDNQKHSVVYP 60
>UniRef50_Q9HP78 Cluster: Translation initiation factor 5A; n=5;
Halobacteriaceae|Rep: Translation initiation factor 5A -
Halobacterium salinarium (Halobacterium halobium)
Length = 127
Score = 42.3 bits (95), Expect = 0.009
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 122 LRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVPPHTTWXYPTX 301
L++ + M+ C+I ST+K GKHG AK + F+GKK +S P P
Sbjct: 11 LQEGNYVMMEDAACQINAYSTAKPGKHGSAKARIEAEGVFDGKKRSLSQPVDAKIWVPIV 70
Query: 302 SAK 310
+ K
Sbjct: 71 NRK 73
>UniRef50_A0ECS4 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 41.9 bits (94), Expect = 0.012
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 283 MXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPD-GDLGTXLRTDFDSGKELLCT 459
+ +P ++ E+Y L I +D +L L G +R D+K+P +L LR F+ GK+++
Sbjct: 71 LEIPLIQFEEYSLIGIQNDDFLTLLNSKGTIREDIKMPQFKELANKLRMWFEEGKDIIVQ 130
Query: 460 VAEIL 474
+ + +
Sbjct: 131 IIKYM 135
>UniRef50_Q2U2G6 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 132
Score = 41.5 bits (93), Expect = 0.016
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +2
Query: 35 NTTMGDIE--DTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGH 208
NT D E D FE G FP CS LR G L G PC+I ++ TS +
Sbjct: 6 NTRQEDNEQYDVSFEIGGRQIDG-FPTPCSNLRAGGLVYLRGHPCEITDIHTSPASR--- 61
Query: 209 AKVHLVGIXXFNGKKLKISVPPHTTWXYPTXSAKT 313
+ V +VG G+ + P T P + T
Sbjct: 62 SVVQIVGFDIHTGQFMDDQYPLRETVFVPRINNHT 96
>UniRef50_Q5LR08 Cluster: Putative uncharacterized protein; n=1;
Silicibacter pomeroyi|Rep: Putative uncharacterized
protein - Silicibacter pomeroyi
Length = 138
Score = 39.9 bits (89), Expect = 0.050
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 292 PHVKR--EDYQLTDISDDGYLXLXADNG-----DLR*DLKIPDGDLGTXLRTDFDSGKEL 450
PHVK E Y DI+ GYL L +D G + +L DG G L TD +G EL
Sbjct: 51 PHVKEFLERYSYPDINRPGYLILESDEGRFMNHSMYPNLDFADGIWGVAL-TDIPAGTEL 109
Query: 451 LCTVAEILR*RVRHRRQSKKQLSXNKTNFS 540
C A+ L V H + + +++ FS
Sbjct: 110 TCDYADFLT-GVIHMQPPRHKVTAPSVTFS 138
>UniRef50_P87252 Cluster: Woronin body major protein precursor; n=4;
Pezizomycotina|Rep: Woronin body major protein precursor
- Neurospora crassa
Length = 176
Score = 39.9 bits (89), Expect = 0.050
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 74 TGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTS-KTGKHGHAKVHL 223
TG S T + C +R +L GRPC+++ +STS TG+H + V L
Sbjct: 24 TGTGSASQTVTIPCHHIRLGDILILQGRPCQVIRISTSAATGQHRYLGVDL 74
>UniRef50_Q5YEV5 Cluster: Translation initiation factor 5A; n=1;
Bigelowiella natans|Rep: Translation initiation factor
5A - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 173
Score = 39.1 bits (87), Expect = 0.088
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 116 SXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFN-GKKLKISVPPHTTWXY 292
S ++ + ML GRP +V+ + +K GKHGH K ++V KK + P H
Sbjct: 15 SHVKPGTYLMLKGRPTSVVKATFAKPGKHGHVKCNIVAKDLLKVDKKYQHMCPGHDNIYQ 74
Query: 293 P 295
P
Sbjct: 75 P 75
>UniRef50_Q74N24 Cluster: Translation initiation factor 5A; n=2;
Nanoarchaeum equitans|Rep: Translation initiation factor
5A - Nanoarchaeum equitans
Length = 144
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 152 GRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKKLKISVP 271
G KIV + TSK GKHG AK + I +GKK+ I P
Sbjct: 23 GEVYKIVSIETSKPGKHGSAKARIEAISVTSGKKIVIIKP 62
>UniRef50_Q6LYN8 Cluster: Translation initiation factor 5A; n=5;
Methanococcus|Rep: Translation initiation factor 5A -
Methanococcus maripaludis
Length = 131
Score = 38.3 bits (85), Expect = 0.15
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 98 TFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHLVGIXXFNGKK 253
T P + L+ + ++ G C++++ + SK GKHG AKV L + F K
Sbjct: 4 TKPSELGALKVGQYVVIDGIACRVMDTAHSKPGKHGGAKVRLTAMGIFEPVK 55
>UniRef50_Q01GB7 Cluster: NHL repeat; n=2; Ostreococcus|Rep: NHL
repeat - Ostreococcus tauri
Length = 1783
Score = 36.3 bits (80), Expect = 0.62
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 346 LXLXADNGDLR*DLKIPDG-----DLGTXLRTDFDSGKELLCTV 462
+ L A+NGD R DLK+P G L +R FD GKE+ T+
Sbjct: 1 MSLMAENGDTREDLKLPSGHDDADKLAEQIRVAFDEGKEVAVTI 44
>UniRef50_Q9UW16 Cluster: Vacuolar-ATPase; n=3; Sordariomycetes|Rep:
Vacuolar-ATPase - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 181
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 98 TFPMQCSXLRKNGFXMLXGRPCKIVEMSTS-KTGKHGHAKVHL 223
T + C +R +L GRPC+++ +STS TG+H + V L
Sbjct: 37 TVSIPCHHIRLGDILLLQGRPCQVIRISTSAATGQHRYLGVDL 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,468,445
Number of Sequences: 1657284
Number of extensions: 10148622
Number of successful extensions: 18633
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 18121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18619
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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