Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060667.seq
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 546 IRVNXLLIFYNSTTSLHK 599
           I +N LL  Y STT LHK
Sbjct: 126 IEIN-LLKHYQSTTDLHK 142


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 458 VHNNSLPLSKSVRNXVPRSPSG 393
           ++NN++ L K + N   ++P+G
Sbjct: 203 INNNNIELYKEIFNGKRKNPNG 224


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 282 VVCGGTDIFN 253
           V+CG +DIFN
Sbjct: 326 VICGESDIFN 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,378
Number of Sequences: 336
Number of extensions: 2452
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)