Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060667.seq
(635 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 123 2e-28
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 123 2e-28
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 120 2e-27
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 120 2e-27
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 120 2e-27
AY061599-1|AAL29147.1| 350|Drosophila melanogaster SD05291p pro... 28 9.2
AE014298-2810|AAF48928.1| 350|Drosophila melanogaster CG7635-PA... 28 9.2
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 123 bits (296), Expect = 2e-28
Identities = 71/158 (44%), Positives = 89/158 (56%), Gaps = 1/158 (0%)
Frame = +2
Query: 44 MGDIEDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHL 223
M +++D HFET DSG S T+PMQCS LRKNGF ML RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 224 VGIXXFNGKKLKISVPPHTTWXYPTXSAKTTN*LISRMMAT*X*XLTTVTCVRTS-KFRM 400
VGI F+ KK + P P + LI+ + +T +R K
Sbjct: 60 VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQ-LIAISDDSFLTLMTDSGDLREDLKVPE 118
Query: 401 VTSAHXCVLTSTAARNCCAPWLKSCGEECVIAVKAKNS 514
L + ++ LK+CGEECVIA+K +
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTA 156
Score = 109 bits (262), Expect = 3e-24
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K EDICPSTH M VP+VKRED QL ISDD +L L D+GDLR DLK+P+G+LG LR D
Sbjct: 69 KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLD 128
Query: 430 FDSGKELLCTV 462
FDSGK+LLCTV
Sbjct: 129 FDSGKDLLCTV 139
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 123 bits (296), Expect = 2e-28
Identities = 71/158 (44%), Positives = 89/158 (56%), Gaps = 1/158 (0%)
Frame = +2
Query: 44 MGDIEDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHL 223
M +++D HFET DSG S T+PMQCS LRKNGF ML RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 224 VGIXXFNGKKLKISVPPHTTWXYPTXSAKTTN*LISRMMAT*X*XLTTVTCVRTS-KFRM 400
VGI F+ KK + P P + LI+ + +T +R K
Sbjct: 60 VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQ-LIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 401 VTSAHXCVLTSTAARNCCAPWLKSCGEECVIAVKAKNS 514
L + ++ LK+CGEECVIA+K +
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTA 156
Score = 107 bits (258), Expect = 9e-24
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K EDICPSTH M VP+VKRED QL ISDD +L L ++GDLR DLK+P+G+LG LR D
Sbjct: 69 KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128
Query: 430 FDSGKELLCTV 462
FDSGK+LLCTV
Sbjct: 129 FDSGKDLLCTV 139
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 120 bits (288), Expect = 2e-27
Identities = 70/158 (44%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +2
Query: 44 MGDIEDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHL 223
M +++D FET DSG S T+PMQCS LRKNGF ML RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 224 VGIXXFNGKKLKISVPPHTTWXYPTXSAKTTN*LISRMMAT*X*XLTTVTCVRTS-KFRM 400
VGI F+ KK + P P + LI+ + +T +R K
Sbjct: 60 VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQ-LIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 401 VTSAHXCVLTSTAARNCCAPWLKSCGEECVIAVKAKNS 514
L + ++ LK+CGEECVIA+K +
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTA 156
Score = 107 bits (258), Expect = 9e-24
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K EDICPSTH M VP+VKRED QL ISDD +L L ++GDLR DLK+P+G+LG LR D
Sbjct: 69 KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128
Query: 430 FDSGKELLCTV 462
FDSGK+LLCTV
Sbjct: 129 FDSGKDLLCTV 139
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 120 bits (288), Expect = 2e-27
Identities = 70/158 (44%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +2
Query: 44 MGDIEDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHL 223
M +++D FET DSG S T+PMQCS LRKNGF ML RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 224 VGIXXFNGKKLKISVPPHTTWXYPTXSAKTTN*LISRMMAT*X*XLTTVTCVRTS-KFRM 400
VGI F+ KK + P P + LI+ + +T +R K
Sbjct: 60 VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQ-LIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 401 VTSAHXCVLTSTAARNCCAPWLKSCGEECVIAVKAKNS 514
L + ++ LK+CGEECVIA+K +
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTA 156
Score = 107 bits (258), Expect = 9e-24
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K EDICPSTH M VP+VKRED QL ISDD +L L ++GDLR DLK+P+G+LG LR D
Sbjct: 69 KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128
Query: 430 FDSGKELLCTV 462
FDSGK+LLCTV
Sbjct: 129 FDSGKDLLCTV 139
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 120 bits (288), Expect = 2e-27
Identities = 70/158 (44%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Frame = +2
Query: 44 MGDIEDTHFETGDSGXSXTFPMQCSXLRKNGFXMLXGRPCKIVEMSTSKTGKHGHAKVHL 223
M +++D FET DSG S T+PMQCS LRKNGF ML RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 224 VGIXXFNGKKLKISVPPHTTWXYPTXSAKTTN*LISRMMAT*X*XLTTVTCVRTS-KFRM 400
VGI F+ KK + P P + LI+ + +T +R K
Sbjct: 60 VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQ-LIAISDDSFLTLMTESGDLREDLKVPE 118
Query: 401 VTSAHXCVLTSTAARNCCAPWLKSCGEECVIAVKAKNS 514
L + ++ LK+CGEECVIA+K +
Sbjct: 119 GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTA 156
Score = 107 bits (258), Expect = 9e-24
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +1
Query: 250 KVEDICPSTHXMXVPHVKREDYQLTDISDDGYLXLXADNGDLR*DLKIPDGDLGTXLRTD 429
K EDICPSTH M VP+VKRED QL ISDD +L L ++GDLR DLK+P+G+LG LR D
Sbjct: 69 KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128
Query: 430 FDSGKELLCTV 462
FDSGK+LLCTV
Sbjct: 129 FDSGKDLLCTV 139
>AY061599-1|AAL29147.1| 350|Drosophila melanogaster SD05291p
protein.
Length = 350
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 174 STILHGRPFSIXKPFLRRXEHCMGKVXEXPESP 76
STI+ P + P+L + H MG E +SP
Sbjct: 299 STIIFPLPMELLTPYLAKYAHLMGPPPELKQSP 331
>AE014298-2810|AAF48928.1| 350|Drosophila melanogaster CG7635-PA
protein.
Length = 350
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 174 STILHGRPFSIXKPFLRRXEHCMGKVXEXPESP 76
STI+ P + P+L + H MG E +SP
Sbjct: 299 STIIFPLPMELLTPYLAKYAHLMGPPPELKQSP 331
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,297,654
Number of Sequences: 53049
Number of extensions: 502771
Number of successful extensions: 888
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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