BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060666.seq
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 200 8e-52
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 198 3e-51
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 198 3e-51
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 198 3e-51
12_02_1282 + 27528159-27529148,27529549-27529614 198 4e-51
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 197 6e-51
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 196 2e-50
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 195 2e-50
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 195 3e-50
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 193 1e-49
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 115 4e-26
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 98 7e-21
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 95 6e-20
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 82 5e-16
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 52 6e-07
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 46 3e-05
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 44 9e-05
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 43 2e-04
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 40 0.002
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 34 0.092
03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093 30 2.0
12_02_0823 + 23461423-23462124 29 4.6
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 29 4.6
03_06_0331 - 33181757-33181795,33182325-33182453,33182941-331829... 28 6.0
10_08_1037 - 22477358-22478752 28 8.0
08_01_1006 - 10191817-10191822,10192449-10192745,10192826-101929... 28 8.0
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 28 8.0
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 28 8.0
02_02_0572 + 11667455-11670783,11672026-11672419 28 8.0
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 201
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 198 bits (483), Expect = 3e-51
Identities = 94/108 (87%), Positives = 95/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDSLMKILTERGYS 201
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 198 bits (483), Expect = 3e-51
Identities = 94/108 (87%), Positives = 95/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDSLMKILTERGYS 201
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 198 bits (483), Expect = 3e-51
Identities = 94/108 (87%), Positives = 95/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDSLMKILTERGYS 201
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 198 bits (482), Expect = 4e-51
Identities = 94/108 (87%), Positives = 94/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 104 bits (249), Expect = 8e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 201
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 197 bits (481), Expect = 6e-51
Identities = 94/113 (83%), Positives = 95/113 (84%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE P+NPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXILRRIT 593
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I T
Sbjct: 119 KMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFT 171
Score = 107 bits (257), Expect = 8e-24
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE +
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + + PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGIVLDSGDG-VSHTVPIYEGFTLPHAILRLDLA-GRDLTDNLMKILTERGYS 200
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 196 bits (477), Expect = 2e-50
Identities = 92/108 (85%), Positives = 95/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETF+ PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDSLMKILTERGYS 201
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 195 bits (476), Expect = 2e-50
Identities = 93/113 (82%), Positives = 95/113 (84%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQ+KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE+HPVLLTE PLNPKANRE
Sbjct: 59 AQAKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXILRRIT 593
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I T
Sbjct: 119 KMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYT 171
Score = 110 bits (264), Expect = 1e-24
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE +
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 262 AK 267
AK
Sbjct: 61 AK 62
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/59 (47%), Positives = 32/59 (54%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + Y PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGIVLDSGDG-VSHTVPIYEGYTLPHAILRLDLA-GRDLTDHLMKILTERGYS 200
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 195 bits (475), Expect = 3e-50
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP LLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFE+FN PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDALMKILTERGYS 201
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 193 bits (470), Expect = 1e-49
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLSL---YASGRIVLDSGDGVTHTVPI 164
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +2
Query: 590 YAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 168 YALPHAILRLDLA-GRDLTDCLMKILTERGYS 198
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 115 bits (276), Expect = 4e-26
Identities = 51/102 (50%), Positives = 70/102 (68%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMF 455
L + YP+ +GIV +WDDM IW H FY+EL+V P E +LLT+ PLNP NREKM + MF
Sbjct: 66 LDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMF 125
Query: 456 ETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXIL 581
E +N +++ +QAVLSL + V+DSGDGV+H V ++
Sbjct: 126 EKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVV 167
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 198
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 97.9 bits (233), Expect = 7e-21
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFET 461
L YPI +G V NWD ME+ W +N LR PE+H LLTE PL P RE +IMFET
Sbjct: 87 LSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFET 146
Query: 462 FNTPAMYVAIQAVLSL-----TRPXVPXVFVLDSGDGVSHNVXI 578
FN P +Y+A Q VL+L T V+D GDG +H V +
Sbjct: 147 FNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPV 190
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 189
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 94.7 bits (225), Expect = 6e-20
Identities = 40/81 (49%), Positives = 56/81 (69%)
Frame = +3
Query: 270 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQI 449
G+ T K+PI HG V +WD ME+ W +N LR PEEH LLT+ P++ +RE +I
Sbjct: 82 GLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDSPVSTPESRECAGEI 141
Query: 450 MFETFNTPAMYVAIQAVLSLT 512
MFETFN P +Y+++Q+VLSL+
Sbjct: 142 MFETFNVPGLYISVQSVLSLS 162
Score = 34.3 bits (75), Expect = 0.092
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 189
A+V+DNG+G K GF+G+ P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/89 (40%), Positives = 53/89 (59%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETFNT 470
P++ G VT+WD ++ IW+H F L + PEEHP+L+ E N REK ++MFE +
Sbjct: 137 PMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKV 196
Query: 471 PAMYVAIQAVLSLTRPXVPXVFVLDSGDG 557
PA+++A AVL+ V+DSG G
Sbjct: 197 PALFLAKNAVLTSFASGRATSLVVDSGGG 225
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 186
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREK 437
P++ G +WD ++ IW+H F L + PEEHP+L+ E N REK
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVEPSTNTGQQREK 140
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMF 455
+TL+ PI+ G + N + ++W N L+V P +LL E NP A + +++F
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVF 119
Query: 456 ETFNTPAMYVA 488
E ++ VA
Sbjct: 120 EELGFKSLCVA 130
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 198
+V+DNG G+ KAGF GD P AV P+ + +P
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP 38
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFET 461
++ P + +V ++ ME I F + HP+L+TE NP +R +M++++FET
Sbjct: 82 IRSPFDDDVVYQFEYMEYILDFGFDRLGATSEVGHPILMTECECNPSFSRARMSELLFET 141
Query: 462 FNTPAM 479
+ P++
Sbjct: 142 YGVPSI 147
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 252
+V+DNG+ + G+AG+ PR F +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHR----SSGETVTVVGD 66
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 261 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREK 437
++R + + P++ G +WD ++ IW+H F PEEHP+L+ E N REK
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYPEEHPMLIVEPSTNTGQQREK 217
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 261 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREK 437
++R + + P++ G +WD ++ IW+H F EEHP+L+ E N REK
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYAEEHPMLIVEPSTNTGQQREK 118
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 34.3 bits (75), Expect = 0.092
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 420 KANREKMTQIMFETFNTPAMYVAIQAVLSL 509
+A RE++ Q+MFE FN Y + QAVLSL
Sbjct: 156 QALREQLAQLMFEKFNVSGFYDSEQAVLSL 185
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFA-GDDAPRAVFPS 183
A+VVD GS + KAG A D +P V PS
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS 30
>03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093
Length = 435
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 304 PCSMGYLRVRIPLLLCAHLLHKSPSVPYRPSRPDGGAFPR 185
PCS + L+LC + + P+V +RP+ PDGGA P+
Sbjct: 192 PCSRSH-----DLILC-NSQSRCPTVQHRPTPPDGGAPPK 225
>12_02_0823 + 23461423-23462124
Length = 233
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 272 TSFALCSSPT*ESFCPIPT---ITP*WRGLPTIEGNTAR 165
TS A + T + CP P +TP G P+I GNTAR
Sbjct: 19 TSVAAATKLTLHNLCPYPVWPLVTPN-TGFPSISGNTAR 56
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 203 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 84
WR P + + ARG S P + AL +P++ +++ H
Sbjct: 251 WRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEH 290
>03_06_0331 -
33181757-33181795,33182325-33182453,33182941-33182967,
33183459-33183545,33183827-33183975,33185467-33185521,
33185596-33187584,33188705-33188782
Length = 850
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 410 PQPQGQQREDDPDHVRNIQH 469
P Q+ DDPDHV+N+ H
Sbjct: 393 PHETNQEDLDDPDHVKNLLH 412
>10_08_1037 - 22477358-22478752
Length = 464
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 368 CRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAYAS-GRTXGIRAG 544
C P PSP H Q Q QQ++ P +H + H + A A A+ AG
Sbjct: 159 CSPPPIPSPVHRHGSQQQ-QQQQQQPASRGQQARPQHPQGHATAAAAAAAVTPAAAAAAG 217
Query: 545 LRRRCLPQRAH 577
L+ + P H
Sbjct: 218 LQHQQEPVPRH 228
>08_01_1006 -
10191817-10191822,10192449-10192745,10192826-10192975,
10194558-10195370
Length = 421
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 230 CPIPTITP*WRGLPTIEGNTARGASSPAK 144
C +P P +RG P++ T RG + PA+
Sbjct: 142 CDMPLAPPGFRGFPSLVSLTLRGVTLPAE 170
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Frame = -3
Query: 214 SRPDGGA---FPRSRGTRREEHHL-LRNRPCTY 128
S+ D GA +P+ GT R+ H+ ++NRPC +
Sbjct: 1333 SKADAGASKTYPQQAGTIRKNGHIVIKNRPCKW 1365
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 241 KSPSVPYRPSRPDGGAFPRSRGTRREEHHLLR 146
K P P P PD A RSR TRR +LR
Sbjct: 217 KLPPPPAPPPAPDDDAASRSRSTRRRLVKVLR 248
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 374 PRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 466
P PA GS P G R DDPD RN++
Sbjct: 95 PSSASQPAAGGSKFP-GLSRPDDPDRARNLR 124
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,749,703
Number of Sequences: 37544
Number of extensions: 503700
Number of successful extensions: 1607
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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