Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060666.seq
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 199 1e-51
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_56| Best HMM Match : Actin (HMM E-Value=0) 198 3e-51
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 198 3e-51
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 5e-28
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 3e-24
SB_54| Best HMM Match : Actin (HMM E-Value=0) 99 2e-21
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 87 2e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 6e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 59 4e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 8e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.66
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.0
SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1) 30 2.0
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 2.7
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 2.7
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.7
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 29 3.5
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 3.5
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 6.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 199 bits (486), Expect = 1e-51
Identities = 94/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN+PAMYVAIQAVLSL V+DSGDGVSH V I
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPI 166
Score = 123 bits (296), Expect = 2e-28
Identities = 54/62 (87%), Positives = 60/62 (96%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 198 bits (483), Expect = 3e-51
Identities = 93/108 (86%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN+PAMYVAIQAVLSL V+DSGDGV+H V I
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 166
Score = 123 bits (296), Expect = 2e-28
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAI+RLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGIVMDSGDG-VTHTVPIYEGYALPHAIIRLDLA-GRDLTDYLMKILTERGYS 200
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 198 bits (483), Expect = 3e-51
Identities = 93/108 (86%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN+PAMYVAIQAVLSL V+DSGDGV+H V I
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 165
Score = 120 bits (289), Expect = 1e-27
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 143 YASGRTTGIVMDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 199
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 198 bits (483), Expect = 3e-51
Identities = 93/108 (86%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN+PAMYVAIQAVLSL V+DSGDGV+H V I
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 165
Score = 121 bits (292), Expect = 5e-28
Identities = 55/60 (91%), Positives = 59/60 (98%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 143 YASGRTTGIVMDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 199
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 198 bits (483), Expect = 3e-51
Identities = 93/108 (86%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN+PAMYVAIQAVLSL V+DSGDGV+H V I
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 166
Score = 127 bits (307), Expect = 7e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGIVMDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 121 bits (292), Expect = 5e-28
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 353
AQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = +3
Query: 426 NREKMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
N + M +IMFETFN+PAMYVAIQAVLSL V+DSGDGV+H V I
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 128
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAI+RLDL+ R MKIL ERGYS
Sbjct: 106 YASGRTTGIVMDSGDG-VTHTVPIYEGYALPHAIIRLDLA-GRDLTDYLMKILTERGYS 162
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 109 bits (261), Expect = 3e-24
Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEXPLNPKANR 431
A R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NR
Sbjct: 61 ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNR 120
Query: 432 EKMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSH 566
EKM ++MFE + +Y+AIQAVL+L + V+DSGDGV+H
Sbjct: 121 EKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTH 165
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 100 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDE
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDE 60
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 99 bits (238), Expect = 2e-21
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = +3
Query: 333 KIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLT 512
K+W H F ++LRV E+ PVLLTE PLNPK NRE+M Q+MFE+FN P MYVA+QAV++L
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 513 RPXVPXVFVLDSGDGVSHNVXI 578
V D GDGVSH V +
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPV 2210
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 207
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +3
Query: 381 EHPVLLTEXPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGV 560
+HPVLLTE PLNP+ NREK ++ FETFN PA+++++QAVLSL VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 561 SHNVXI 578
SH+V I
Sbjct: 186 SHSVPI 191
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/87 (33%), Positives = 50/87 (57%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETFNT 470
PI+ G++ +WD EKI + + ++ HP+L++E N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 471 PAMYVAIQAVLSLTRPXVPXVFVLDSG 551
PA ++ +VL+ V+DSG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 207
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = +3
Query: 447 IMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
IMFE FN+PA+YVAIQAVLSL V DSGDGVSHNV I
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPI 44
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MK++ ERGYS
Sbjct: 22 YASGRTTGVVFDSGDG-VSHNVPIYEGYALPHAILRLDLA-GRDLTDYLMKLMTERGYS 78
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 76 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 222
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 285 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 398
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 204 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 88
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEXPLNPKANRE 434
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 407 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 499
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 174 VPLDRGKAPPSGRDGRYGTEGLLCRR*AQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 347
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 348 TFYN 359
T N
Sbjct: 497 TCPN 500
>SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)
Length = 2568
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 572 HVVGDTVAGVQHEYRWYXRTRKREHGLDGDVHGGRVECFE 453
H+ G+ + GV+ EYR R GL D+H RV+ E
Sbjct: 1754 HLSGEKIRGVECEYRGVSAFGDRISGLPVDLHSTRVDMKE 1793
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNE 362
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 94 EVAALVVDNGSGMCKAGFAGDDAPRAV 174
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +1
Query: 475 PCTSPSKPCSXXXXXXXXXXSCWTPATVSPTTCXSYEGLRXPPRHPASGLKPVANFT 645
PC SPS P C+T T+SP C ++ L P + L P FT
Sbjct: 510 PCFSPSNPSPASHLSPKP---CFTSLTLSPKPCFTFLTLSTKPCFTSLTLSPKPCFT 563
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 237 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 127
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -3
Query: 385 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAH--LLHKSPSVPYRPS 212
CS + + C + ++V CS + V + ++C+ + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 211 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 119
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,859,802
Number of Sequences: 59808
Number of extensions: 544301
Number of successful extensions: 1687
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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