Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060666.seq
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 200 6e-52
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 200 6e-52
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 200 8e-52
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 200 8e-52
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 200 8e-52
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 200 8e-52
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 200 8e-52
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 200 8e-52
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 200 8e-52
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 200 8e-52
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 195 2e-50
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 140 6e-34
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 128 3e-30
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 128 3e-30
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 127 6e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 127 6e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 107 7e-24
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 74 1e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.009
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.009
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 5.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 5.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 5.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 5.4
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z49909-12|CAA90114.2| 121|Caenorhabditis elegans Hypothetical p... 28 7.2
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.2
AF040645-1|AAB94973.1| 377|Caenorhabditis elegans Hypothetical ... 27 9.5
AF025456-3|AAB70956.1| 440|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 200 bits (489), Expect = 6e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPI 166
Score = 127 bits (307), Expect = 6e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGIVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (489), Expect = 6e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPI 166
Score = 126 bits (303), Expect = 2e-29
Identities = 55/62 (88%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGIVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Score = 128 bits (310), Expect = 3e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Score = 128 bits (310), Expect = 3e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Score = 128 bits (310), Expect = 3e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Score = 128 bits (310), Expect = 3e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Score = 128 bits (310), Expect = 3e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 15 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 74
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 75 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 122
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 100 YASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 156
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 214 MVGMGQKDSYVGDEHRAK 267
MVGMGQKDSYVGDE ++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 45 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 104
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 105 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 152
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +1
Query: 136 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 130 YASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 186
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 200 bits (488), Expect = 8e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGV+H V I
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Score = 128 bits (310), Expect = 3e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT G+ + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 144 YASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 200
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 195 bits (476), Expect = 2e-50
Identities = 91/108 (84%), Positives = 95/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE PLNPK+NRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNRE 117
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYV IQAVLSL VLD+GDGV+H V I
Sbjct: 118 KMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPI 165
Score = 122 bits (294), Expect = 2e-28
Identities = 55/60 (91%), Positives = 59/60 (98%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAI RLDL+ R MKIL ERGY+
Sbjct: 143 YASGRTTGIVLDTGDG-VTHTVPIYEGYALPHAIQRLDLA-GRDLTDYMMKILTERGYT 199
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 140 bits (340), Expect = 6e-34
Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEXPLNPKANR 431
A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+ PLNP NR
Sbjct: 61 AESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNR 120
Query: 432 EKMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXILR 584
E+ +I FETFN PA+Y+ +QAVLSL VLDSGDGV+H V I++
Sbjct: 121 ERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVK 171
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 249
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIG 58
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 128 bits (310), Expect = 3e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKI 338
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 128 bits (310), Expect = 3e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKI 338
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 127 bits (307), Expect = 6e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKI 338
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 127 bits (307), Expect = 6e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDM 329
AQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 113 bits (271), Expect = 1e-25
Identities = 56/120 (46%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = +3
Query: 210 RDGRYGTEGLLCRR*AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 386
R G + L+ R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 387 PVLLTEXPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSH 566
+LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+L + V+DSGDGV+H
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 255
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 107 bits (257), Expect = 7e-24
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 8/108 (7%)
Frame = +3
Query: 279 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFE 458
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 459 TFNTPAMYVAIQAVLSLTRPXVPXV--------FVLDSGDGVSHNVXI 578
+FN P +Y+A+QAVL+LT V+DSGDGV+H + +
Sbjct: 140 SFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPV 187
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 189
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +3
Query: 294 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETFNTP 473
++ G++ +W+ EKI H++ N L P EHPVL +E N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 474 AMYVAIQAVLSLTRPXVPXVFVLDSG 551
A Y++ VLS ++DSG
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSG 179
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 189
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETF 464
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETF 464
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 186 RGKAPPSGRDGRYGTEGLLCRR*AQSKRG 272
RGKA +GRDGR G EG R Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 365 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 490
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 161 ASSPAKPALHIPEPLSTTNAATSS 90
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 365 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 490
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 161 ASSPAKPALHIPEPLSTTNAATSS 90
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 365 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 490
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 161 ASSPAKPALHIPEPLSTTNAATSS 90
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 365 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 490
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 161 ASSPAKPALHIPEPLSTTNAATSS 90
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -3
Query: 343 CQIFSMSSQLVTIPC-SMGYLRVRIPLLLCAHLLHKSPSVP-YRPSRPD 203
CQ+FS QLVT+ SMG +++++ + L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>Z49909-12|CAA90114.2| 121|Caenorhabditis elegans Hypothetical
protein C14A4.10 protein.
Length = 121
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 422 GQQREDDPDHVRNIQHARHVRRHPSRALAYASG 520
G EDD + V N + +HV R R++ Y G
Sbjct: 9 GSDAEDDKEKVVNPEDKKHVLRRDLRSMVYGFG 41
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 136 KAGFAGDDAPRAVFPSIVGRPRHQG 210
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF040645-1|AAB94973.1| 377|Caenorhabditis elegans Hypothetical
protein F52C6.5 protein.
Length = 377
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 545 VQHEYRWYXRTRKREHGLDGDVHGGRVECFE 453
V+H+ W R K+E L ++H + ECFE
Sbjct: 30 VRHDIPWKIRIFKKEGFLGVNLHCEKEECFE 60
>AF025456-3|AAB70956.1| 440|Caenorhabditis elegans Hypothetical
protein C46F9.2 protein.
Length = 440
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 545 VQHEYRWYXRTRKREHGLDGDVHGGRVECFE 453
V+H+ W R K+E L ++H + ECFE
Sbjct: 30 VRHDIPWNIRIFKKEGFLGVNLHCEKEECFE 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,125,146
Number of Sequences: 27780
Number of extensions: 367153
Number of successful extensions: 1377
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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