Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060666.seq
(687 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 200 7e-52
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 200 9e-52
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 200 9e-52
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 198 3e-51
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 198 4e-51
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 198 4e-51
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 198 4e-51
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 197 5e-51
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 197 5e-51
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 180 1e-45
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 168 3e-42
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 159 2e-39
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 120 7e-28
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 99 2e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 2e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 64 1e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 53 2e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 48 4e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.10
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.95
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.8
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 27 8.8
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 8.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (488), Expect = 7e-52
Identities = 95/108 (87%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYS 201
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (487), Expect = 9e-52
Identities = 95/108 (87%), Positives = 95/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDHLMKILTERGYS 201
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (487), Expect = 9e-52
Identities = 95/108 (87%), Positives = 95/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFNTPAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDHLMKILTERGYS 201
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 198 bits (483), Expect = 3e-51
Identities = 94/108 (87%), Positives = 95/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGY 682
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGY
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDSLMKILTERGY 200
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 198 bits (482), Expect = 4e-51
Identities = 92/108 (85%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN+PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 101 bits (241), Expect = 6e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 40.7 bits (91), Expect = 9e-04
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGY 682
YASGRT GI + + + ++ PHAILRLDL+ R MKIL ERGY
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGFSLPHAILRLDLA-GRDLTDYLMKILTERGY 200
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 198 bits (482), Expect = 4e-51
Identities = 92/108 (85%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN+PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 101 bits (241), Expect = 6e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 40.7 bits (91), Expect = 9e-04
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGY 682
YASGRT GI + + + ++ PHAILRLDL+ R MKIL ERGY
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGFSLPHAILRLDLA-GRDLTDYLMKILTERGY 200
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 198 bits (482), Expect = 4e-51
Identities = 92/108 (85%), Positives = 96/108 (88%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN+PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 101 bits (241), Expect = 6e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 40.7 bits (91), Expect = 9e-04
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGY 682
YASGRT GI + + + ++ PHAILRLDL+ R MKIL ERGY
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGFSLPHAILRLDLA-GRDLTDYLMKILTERGY 200
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 197 bits (481), Expect = 5e-51
Identities = 93/108 (86%), Positives = 94/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDALMKILTERGYS 201
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 197 bits (481), Expect = 5e-51
Identities = 93/108 (86%), Positives = 94/108 (87%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE PLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETFN PAMYVAIQAVLSL VLDSGDGVSH V I
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 167
Score = 105 bits (252), Expect = 3e-23
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/59 (49%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
YASGRT GI + + + YA PHAILRLDL+ R MKIL ERGYS
Sbjct: 145 YASGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTDALMKILTERGYS 201
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 180 bits (437), Expect = 1e-45
Identities = 81/108 (75%), Positives = 91/108 (84%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
AQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTE PLNPK NRE
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNRE 120
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFE+F P+MY+ IQAVLSL VLDSGDGVSH V I
Sbjct: 121 KMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPI 168
Score = 99 bits (238), Expect = 1e-21
Identities = 43/59 (72%), Positives = 53/59 (89%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDE +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
Y+SGRT GI + + + YA PHAILRLDL+ R KI+ ERGY+
Sbjct: 146 YSSGRTTGIVLDSGDG-VSHTVPIYEGYALPHAILRLDLA-GRDLTEYLTKIMMERGYT 202
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 168 bits (408), Expect = 3e-42
Identities = 77/108 (71%), Positives = 90/108 (83%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANRE 434
A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTE PLNPKA+RE
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADRE 74
Query: 435 KMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXI 578
KMTQIMFETF P+MY+ +QA LSL VLDSGDGVS+ V I
Sbjct: 75 KMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPI 122
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 593 AXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
A PHAILRLDL+ R MKI+ ERGY+
Sbjct: 127 ALPHAILRLDLA-GRHLTNYLMKIMMERGYT 156
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 159 bits (386), Expect = 2e-39
Identities = 78/123 (63%), Positives = 89/123 (72%)
Frame = +3
Query: 210 RDGRYGTEGLLCRR*AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 389
RDG E + + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 390 VLLTEXPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHN 569
VLLTE P NPKANREKMTQIMFE+F+ PAMYV++Q+VL L VLD G+ VSH
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 570 VXI 578
V +
Sbjct: 154 VPV 156
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRA 264
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 509 YASGRTXGIRAGLRRRCLPQRAHLTKDYAXPHAILRLDLSRSRTSQXXFMKILXERGYS 685
Y+SGRT G+ L R + + + YA PH ILRLDL R ++I+ ERGY+
Sbjct: 134 YSSGRTTGVVLDLGER-VSHTVPVYEGYALPHGILRLDLG-GRDLTDYLIEIMTERGYT 190
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 120 bits (290), Expect = 7e-28
Identities = 51/102 (50%), Positives = 71/102 (69%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMF 455
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 456 ETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXIL 581
E +N +++ IQAVL+L + V+DSGDGV+H V ++
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVV 167
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 252
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFET 461
L YPIEHG V +WD ME+ W +N LR PE+H LLTE PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 462 FNTPAMYVAIQAVLSL-----TRPXVPXVFVLDSGDGVSHNVXI 578
FN P +Y+A+ +VL+L T V+D GDG +H V +
Sbjct: 146 FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPV 189
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 189
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/98 (38%), Positives = 58/98 (59%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMT 443
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 444 QIMFETFNTPAMYVAIQAVLSLTRPXVPXVFVLDSGDG 557
++MFE + PA+++A VL+ V+D G G
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGG 182
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEXPLNPKANREKMTQIMFETFN 467
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 468 TPAMYVAIQAVLSL 509
Y + QAVLSL
Sbjct: 117 VSGFYASEQAVLSL 130
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 195
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREK 437
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFET 461
++ PI+ G + N D +IW H F + L +AP +LLTE PL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 462 FNTPAMYVA 488
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 198
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETFN 467
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 468 TPAMYVAIQAVLS 506
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 252
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 227 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 90
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 404 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAY 511
GSP+ +G + E+D D + NI+H + +H + A+ Y
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREK 437
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREK 437
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 203 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 81
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/104 (23%), Positives = 37/104 (35%)
Frame = +3
Query: 297 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEXPLNPKANREKMTQIMFETFNTPA 476
EHGI +D EK+W F+ + +LL + P A T A
Sbjct: 234 EHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRA-----TPEQVA 288
Query: 477 MYVAIQAVLSLTRPXVPXVFVLDSGDGVSHNVXILRRITXSPTP 608
Y ++ + + P VP + L G L + +P P
Sbjct: 289 SY-TLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNP 331
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 307 IPCSMGYLRVRIPLLLCAHLLHKSPSVPYRPS 212
+ + Y R+R C L H+ P PY PS
Sbjct: 193 VKIGIDYERIRKRCFQCQRLTHEKPRCPYLPS 224
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,542,707
Number of Sequences: 28952
Number of extensions: 351699
Number of successful extensions: 980
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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