Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060665.seq
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B63B2 Cluster: PREDICTED: similar to organic an...    41   0.033
UniRef50_UPI00006CB6EC Cluster: hypothetical protein TTHERM_0049...    35   2.1  
UniRef50_A0YYP3 Cluster: Transposase; n=12; Cyanobacteria|Rep: T...    34   3.7  
UniRef50_Q4P4F6 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_UPI0000F1D593 Cluster: PREDICTED: similar to MPDZ varia...    33   4.9  
UniRef50_Q6SHA5 Cluster: Diaminopropionate ammonia-lyase; n=3; e...    33   4.9  

>UniRef50_UPI00015B63B2 Cluster: PREDICTED: similar to organic anion
            transporter; n=1; Nasonia vitripennis|Rep: PREDICTED:
            similar to organic anion transporter - Nasonia
            vitripennis
          Length = 992

 Score = 40.7 bits (91), Expect = 0.033
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +1

Query: 184  VVTLMEFRLDSAEYCQAQHK 243
            ++T MEF+LDSAEYCQAQHK
Sbjct: 973  ILTYMEFQLDSAEYCQAQHK 992


>UniRef50_UPI00006CB6EC Cluster: hypothetical protein
           TTHERM_00494190; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00494190 - Tetrahymena
           thermophila SB210
          Length = 1601

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -3

Query: 685 RTRLGVTSLHNRLNXPRHNRTDKLSLYFHTTHDSLVAFVLKGSNYIMG 542
           RT  G+   H R+N   +NR    +L  H+T ++  A + K SN + G
Sbjct: 504 RTSSGIQQQHRRINQSSNNRIHDSTLSIHSTSNNPKAKIFKDSNILQG 551


>UniRef50_A0YYP3 Cluster: Transposase; n=12; Cyanobacteria|Rep:
           Transposase - Lyngbya sp. PCC 8106
          Length = 427

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 22/77 (28%), Positives = 33/77 (42%)
 Frame = -2

Query: 617 TVTLFPHNTRQSRSFCFERVQLYNGNCPH*CRFQPLDASESDQTKVQNVETN*IKSLGNI 438
           T+ + PHNT Q+ S C  +V        H C      + + D    +N+    + ++G  
Sbjct: 345 TIPVAPHNTSQNCSNCGNKVPKSLSTRTHICHHCGY-SEDRDVNAAKNILKKALSTVGQT 403

Query: 437 GPLKTSATELLAVLNSS 387
           G LK    E L VL  S
Sbjct: 404 GSLKLGEIEPLLVLEQS 420


>UniRef50_Q4P4F6 Cluster: Putative uncharacterized protein; n=1;
            Ustilago maydis|Rep: Putative uncharacterized protein -
            Ustilago maydis (Smut fungus)
          Length = 1215

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 352  GMWNSARGASSHRRYRQHGSSGWRSPALAFTETFLFICVEPGSTPRCPSGTPSMSPQKGS 173
            G  + + GAS H +  +  SSGW SPA+A           P   P   +  P  +  + S
Sbjct: 1092 GSVSGSLGASPHAQAVRRASSGWTSPAVASAGAMRHWNTSPNLRPVADASLPHSTAHRPS 1151

Query: 172  PDTS 161
            P +S
Sbjct: 1152 PWSS 1155


>UniRef50_UPI0000F1D593 Cluster: PREDICTED: similar to MPDZ variant
           protein; n=1; Danio rerio|Rep: PREDICTED: similar to
           MPDZ variant protein - Danio rerio
          Length = 489

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 355 VGMWNSARGASSHRRYRQHGSSGWRSPALAFTETFLFICVEPGSTPRCPSGTPS 194
           VGM   +R   S     ++G++GW+ P  +F+   L IC +    P   S  PS
Sbjct: 106 VGMEEDSRSGCSIHSVEENGAAGWKEPQSSFS---LTICADSAPQPSSSSQMPS 156


>UniRef50_Q6SHA5 Cluster: Diaminopropionate ammonia-lyase; n=3;
           environmental samples|Rep: Diaminopropionate
           ammonia-lyase - uncultured bacterium 441
          Length = 402

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 503 MRRVVENDINAGSSHYIIGPFQNKSYETVVCC 598
           ++++ E  INA SS  I G ++NK+ E  VCC
Sbjct: 98  IQKLKEEGINANSSDLIKGTYRNKTSELTVCC 129


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,148,323
Number of Sequences: 1657284
Number of extensions: 12363845
Number of successful extensions: 34247
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34233
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)