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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060664.seq
         (680 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42397| Best HMM Match : rve (HMM E-Value=0.0007)                    32   0.49 
SB_33224| Best HMM Match : Retrotrans_gag (HMM E-Value=0.053)          32   0.49 
SB_6077| Best HMM Match : EGF (HMM E-Value=0)                          32   0.49 
SB_32940| Best HMM Match : EGF (HMM E-Value=0)                         31   1.1  
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39)                     30   1.5  
SB_21553| Best HMM Match : Ribosomal_S30 (HMM E-Value=0.96)            30   1.5  
SB_2152| Best HMM Match : EGF (HMM E-Value=0)                          30   1.5  
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_37908| Best HMM Match : Retrotrans_gag (HMM E-Value=0.067)          30   2.0  
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)                   30   2.0  
SB_18963| Best HMM Match : Cyclotide (HMM E-Value=1.7)                 30   2.0  
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)                   30   2.0  
SB_11035| Best HMM Match : Retrotrans_gag (HMM E-Value=0.095)          30   2.0  
SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   2.0  
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)                   30   2.0  
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)          30   2.0  
SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041)                 30   2.0  
SB_25066| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_19685| Best HMM Match : Retrotrans_gag (HMM E-Value=0.061)          30   2.0  
SB_16144| Best HMM Match : DMAP_binding (HMM E-Value=9.6)              30   2.0  
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_45116| Best HMM Match : EGF (HMM E-Value=0)                         29   2.6  
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)                 29   2.6  
SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_20112| Best HMM Match : EGF (HMM E-Value=0)                         29   4.6  
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)                     29   4.6  
SB_32123| Best HMM Match : Keratin_B2 (HMM E-Value=0.019)              29   4.6  
SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.1  
SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5)                28   8.0  
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)                  28   8.0  
SB_9918| Best HMM Match : Ribosomal_S30 (HMM E-Value=1.6)              28   8.0  

>SB_42397| Best HMM Match : rve (HMM E-Value=0.0007)
          Length = 729

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S V+      + + VHR     G LP N  +   +G  L RP
Sbjct: 9   PDCEFKTTDASEVVAIALLANHNLVHRNEAQPGRLPANTAL---KGPKLDRP 57


>SB_33224| Best HMM Match : Retrotrans_gag (HMM E-Value=0.053)
          Length = 222

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S V+      + + VHR     G LP N  +   +G  L RP
Sbjct: 9   PDCEFKTTDASEVVAIALLANHNLVHRNEAQPGRLPANTAL---KGPKLDRP 57


>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1165

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 436 YYCLNGGVCFTVVISESPIYNCECQAGMWARGASSR 543
           Y C NGG CF+   + S  Y CEC  G       S+
Sbjct: 525 YLCRNGGSCFS---NNSTYYTCECPKGYTGHDCESK 557


>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1025

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +1

Query: 388 INVTFPTFKCEPEYSQYYCLNGGVCFTVVISESPIYNCECQAG 516
           +NV+  + KC    S  YC N G C T     S  Y C+C  G
Sbjct: 309 LNVSVKSNKCIEPGSSVYCSNHGQCVTNFSMSS--YQCKCCGG 349


>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2162

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 510 SGYVGPRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNG-GLPGNPCVSRKRGCGLQ 674
           SGY GP+C   D+D +    +P    G C++ G CDN  G  G  C +  RG   Q
Sbjct: 344 SGYEGPKC---DVDINECKVQP----GPCLNGGTCDNYLGTYGCSCKAGYRGKNCQ 392


>SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39)
          Length = 201

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 510 SGYVGPRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNG-GLPGNPCVSRKRGCGLQ 674
           SGY GP+C   D+D +    +P    G C++ G CDN  G  G  C +  RG   Q
Sbjct: 138 SGYEGPKC---DVDINECKVQP----GPCLNGGTCDNYLGTYGCSCKAGYRGKNCQ 186


>SB_21553| Best HMM Match : Ribosomal_S30 (HMM E-Value=0.96)
          Length = 180

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G +P N   +  +G  L RP
Sbjct: 9   PDCEFKTNDASEAVAIALLTNNNLVHRNEAQTGHIPAN---TAPKGPKLDRP 57


>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1603

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 510 SGYVGPRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNG-GLPGNPCVSRKRGCGLQ 674
           SGY GP+C   D+D +    +P    G C++ G CDN  G  G  C +  RG   Q
Sbjct: 162 SGYEGPKC---DVDINECKVQP----GPCLNGGTCDNYLGTYGCSCKAGYRGKNCQ 210


>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1222

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_37908| Best HMM Match : Retrotrans_gag (HMM E-Value=0.067)
          Length = 449

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
          Length = 1590

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_18963| Best HMM Match : Cyclotide (HMM E-Value=1.7)
          Length = 155

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
          Length = 1447

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 26  PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 74


>SB_11035| Best HMM Match : Retrotrans_gag (HMM E-Value=0.095)
          Length = 222

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 886

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = -2

Query: 670 KPHPRFRDTXGLPGRPPLSHRPRWTQSPSSAVGRFKTYELSRSLNSHRGPTYPLDTHSYK 491
           KP P       LP   P  HR RW+ S  S +    + EL    N  R      ++ SY 
Sbjct: 102 KPCPLSPVEGDLPPELPAKHRDRWSTSFQSDLNHNSSIELENE-NGIRNE----ESQSYD 156

Query: 490 SGSPISQ 470
             SPIS+
Sbjct: 157 HNSPISK 163


>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
          Length = 1253

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
          Length = 812

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
          Length = 1059

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_25066| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1167

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_19685| Best HMM Match : Retrotrans_gag (HMM E-Value=0.061)
          Length = 335

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN---TAPKGPKLDRP 57


>SB_16144| Best HMM Match : DMAP_binding (HMM E-Value=9.6)
          Length = 161

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = -2

Query: 670 KPHPRFRDTXGLPGRPPLSHRPRWTQSPSSAVGRFKTYELSRSLNSHRGPTYPLDTHSYK 491
           KP P       LP   P  HR RW+ S  S +    + EL    N  R      ++ SY 
Sbjct: 45  KPCPLSPVEGDLPPELPAKHRDRWSTSFQSDLNHNSSIELENE-NGIRNE----ESQSYD 99

Query: 490 SGSPISQ 470
             SPIS+
Sbjct: 100 HNSPISK 106


>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6753

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 442  CLNGGVCFTVVISESPIYNCECQAGM 519
            CLNGG C   ++ E   YNC C+ G+
Sbjct: 3587 CLNGGTC--TIVGED--YNCTCRQGL 3608



 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 442  CLNGGVCFTVVISESPIYNCECQAGMWARGASSR 543
            CLNGG CF +       Y C+C  G   +  +S+
Sbjct: 1876 CLNGGSCFNM----DGEYRCKCAKGFCGKNCNSK 1905


>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
          Length = 2023

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 442  CLNGGVCFTVVISESPIYNCECQAG 516
            CLNGG C  +V      YNC+CQ G
Sbjct: 1079 CLNGGTCNDLVNG----YNCKCQPG 1099


>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
          Length = 1201

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK  D S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAHPGRLPAN---TAPKGPKLDRP 57


>SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 809

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 495 INRALRYHNGEADSTIKTVVLRVLGL 418
           + R L+YH  E+DSTI  +  +V GL
Sbjct: 347 VERRLKYHLDESDSTINDLYSKVTGL 372


>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
          Length = 2112

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 442  CLNGGVCFTVVISESPIYNCECQAGMWAR 528
            CLN G C TV       YNC C+ G++ +
Sbjct: 998  CLNSGTCRTV----HNTYNCSCRPGVYGK 1022


>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1149

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGN 638
           P CEFK  D S  +      + + VHR     G LP N
Sbjct: 9   PDCEFKTTDASEAVAIALLANHNLVHRNEAQPGRLPAN 46


>SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 2735

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +1

Query: 442  CLNGGVCFTVVIS-ESPIYNCECQAGMWARGASSRTWTTRMF*NGRQLMMETASIAGGAT 618
            CLNGG C   V    +  +NC+C +    R    R             ++E   I G + 
Sbjct: 2178 CLNGGTCLEGVDELGNNRFNCKCPSVYQGRTCDVRRAVVAAKPGS---VLEDGLIIGLSI 2234

Query: 619  MAVFLAIXVCL 651
            + VFL + +C+
Sbjct: 2235 LLVFLVVAICI 2245


>SB_32123| Best HMM Match : Keratin_B2 (HMM E-Value=0.019)
          Length = 1097

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -1

Query: 674 LQAAPTLPRHTXIARKTAIVAPPAMDAV-SIISCRPFQNIRVVQVLELAPR 525
           +Q +   P HT +  +T    P   D V   +SCRP     V+Q L   PR
Sbjct: 367 IQTSSYRPCHTDLVIQTLSYRPCHTDLVMQTLSCRPCHADLVIQTLSYRPR 417


>SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1409

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +1

Query: 442 CLNGGVCFTVVISESPIYNCECQAGMWARGASSRTWTTRMF*NGRQLMMETASIA 606
           C NGGVC     +E   Y+C C+AG   +         +M    +  M++T  +A
Sbjct: 48  CKNGGVCK----NEHGGYSCACKAGFTGKNCEQAYTRAKMAEYAKTNMVDTLVLA 98



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 424  EYSQYYCLNGGVCFTVVISESPIYNCECQA 513
            E S+Y C NGGVC     +E   Y+C C+A
Sbjct: 1005 ECSKYPCQNGGVC----KNEHGGYSCACKA 1030


>SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5)
          Length = 398

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
 Frame = -2

Query: 664 HPRFRDTXGLPGRPPLSHRP--RWTQSPSSAVGRF----KTYELSRSLN-SHRGPTY-PL 509
           HP   +   LP +PPL  +P    T+     +G      K++ + R  + S+  P+Y P 
Sbjct: 194 HPTVNNKPYLPVKPPLPVKPDVSSTKRSQPKIGSSALLPKSFGVPRDRSPSNEKPSYGPT 253

Query: 508 DTHSYKSGSPISQR 467
           +  SY SG P  +R
Sbjct: 254 NGWSYTSGKPTQER 267


>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
          Length = 765

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = -2

Query: 625 PPLSHRPRWTQSPSSAVGRFKTYELSRSLNSHRGPTYPLDTHSYKSGSPISQR*SR 458
           P  S  P+ ++SP S+    K Y  SRS   HR  +      S +S SP  +R S+
Sbjct: 251 PQKSRSPQRSRSPRSS----KRYRSSRSHRKHRSHSRSRSPRSKRSRSPRKRRRSK 302


>SB_9918| Best HMM Match : Ribosomal_S30 (HMM E-Value=1.6)
          Length = 158

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +3

Query: 525 PRCEFKDLDNSYVLKRPTADDGDCVHRGRCDNGGLPGNPCVSRKRGCGLQRP 680
           P CEFK    S  +      + + VHR     G LP N   +  +G  L RP
Sbjct: 9   PDCEFKTTGASEAVAIALLANHNLVHRNEAQTGRLPAN---TAPKGPKLDRP 57


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,719,442
Number of Sequences: 59808
Number of extensions: 393104
Number of successful extensions: 1342
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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