Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060664.seq
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   5.1  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   6.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.7  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   6.7  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   6.7  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   8.9  

>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 99  ADRQRRCEQRIPVRNSNXVMSSPFGFLISHRP 194
           A R R       V++S  V  +PF +L+ H P
Sbjct: 366 AYRNRSAFDAQQVQDSKLVFDTPFLYLVRHNP 397


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 504 VSSGYVGPRCEFKDLDNSYVLKRPTADDGD 593
           + +GY   R     LDN  VL+RP  ++ D
Sbjct: 1   IDAGYHEKRLLHHLLDNYNVLERPVVNESD 30


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 664 HPRFRDTXGLPGRPPLSHRP 605
           HP  RDT       P+SHRP
Sbjct: 145 HPHQRDTGPALFPAPISHRP 164



 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = -2

Query: 667 PHPRFRDTXGLPGRPPLSHRPRWTQSP 587
           P P      G PG PP   RP +   P
Sbjct: 298 PRPPMPMQGGAPGGPPQGMRPNFYNRP 324


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 141 FEQESFARIGVDDPPGHVSCVH 76
           F    F R+GVDDP G  S VH
Sbjct: 338 FGMPLFDRMGVDDPVG-ASSVH 358


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 186 DL*EIRKAMT*PXSNF-EQESFARIGVDDPPGHVSCVHF 73
           DL ++ + +     NF EQ   AR+ ++D P H +C+ +
Sbjct: 569 DLADMERLVLLEPRNFDEQTGRARVLLNDNPLHCNCIAY 607


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 534 RTAGPHTRLTLTVINRALRYHNGEAD 457
           + AG     T+T + R+L +H+ EAD
Sbjct: 581 KQAGRVWNQTITEVLRSLGFHSSEAD 606


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,192
Number of Sequences: 2352
Number of extensions: 12190
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)