Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060664.seq
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074062-1|BAB84888.1| 1282|Homo sapiens FLJ00133 protein protein. 34 0.54
U02327-1|AAA19952.1| 125|Homo sapiens neu differentiation facto... 33 0.94
U02326-1|AAA19951.1| 462|Homo sapiens neu differentiation facto... 33 0.94
M94165-1|AAA58638.1| 640|Homo sapiens heregulin-alpha protein. 33 0.94
AK075302-1|BAC11535.1| 587|Homo sapiens protein ( Homo sapiens ... 32 1.6
BC000218-1|AAH00218.1| 618|Homo sapiens delta-like 3 (Drosophil... 31 2.9
AF241373-1|AAF62542.1| 618|Homo sapiens DLL3 protein precursor ... 31 2.9
BC017568-1|AAH17568.1| 115|Homo sapiens neuregulin 4 protein. 31 3.8
AM392364-1|CAL35829.1| 90|Homo sapiens neuregulin 4 protein. 31 3.8
AY207002-1|AAO49724.1| 58|Homo sapiens neuregulin 1 isoform 4 ... 30 6.6
AF119162-4|AAF28849.1| 844|Homo sapiens neuregulin 2 isoform 2 ... 30 6.6
>AK074062-1|BAB84888.1| 1282|Homo sapiens FLJ00133 protein protein.
Length = 1282
Score = 33.9 bits (74), Expect = 0.54
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 442 CLNGGVCFTVVISESPIYNCECQAGMWAR 528
CLNGG C ++ +P Y C C +G R
Sbjct: 147 CLNGGKCIDDCVTGNPSYTCSCLSGFTGR 175
>U02327-1|AAA19952.1| 125|Homo sapiens neu differentiation factor
protein.
Length = 125
Score = 33.1 bits (72), Expect = 0.94
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 412 KCEPEYSQYYCLNGGVCFTVV-ISESPIYNCECQAG 516
KC E + +C+NGG CF V +S Y C+CQ G
Sbjct: 59 KCA-EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPG 93
>U02326-1|AAA19951.1| 462|Homo sapiens neu differentiation factor
protein.
Length = 462
Score = 33.1 bits (72), Expect = 0.94
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 412 KCEPEYSQYYCLNGGVCFTVV-ISESPIYNCECQAG 516
KC E + +C+NGG CF V +S Y C+CQ G
Sbjct: 181 KCA-EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPG 215
>M94165-1|AAA58638.1| 640|Homo sapiens heregulin-alpha protein.
Length = 640
Score = 33.1 bits (72), Expect = 0.94
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 412 KCEPEYSQYYCLNGGVCFTVV-ISESPIYNCECQAG 516
KC E + +C+NGG CF V +S Y C+CQ G
Sbjct: 181 KCA-EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPG 215
>AK075302-1|BAC11535.1| 587|Homo sapiens protein ( Homo sapiens
cDNA FLJ90821 fis, clone Y79AA1001328, highly similar to
Delta-like protein 3 precursor. ).
Length = 587
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 510 SGYVGPRCEFKDLDNSYVLKRPTADDGDCVHRG---RCDNG-GLPGNPCVSRKRGCGLQ 674
+G+ GPRCE DLD+ R A+ G CV G RC G G C R C ++
Sbjct: 381 AGFAGPRCE-HDLDD--CAGRACANGGTCVEGGGAHRCSCALGFGGRDCRERADPCAVR 436
>BC000218-1|AAH00218.1| 618|Homo sapiens delta-like 3 (Drosophila)
protein.
Length = 618
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 510 SGYVGPRCEFKDLDNSYVLKRPTADDGDCVHRG---RCDNG-GLPGNPCVSRKRGC 665
+G+ GPRCE DLD+ R A+ G CV G RC G G C R C
Sbjct: 381 AGFAGPRCE-HDLDD--CAGRACANGGTCVEGGGAHRCSCALGFGGRDCRERADPC 433
>AF241373-1|AAF62542.1| 618|Homo sapiens DLL3 protein precursor
protein.
Length = 618
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 510 SGYVGPRCEFKDLDNSYVLKRPTADDGDCVHRG---RCDNG-GLPGNPCVSRKRGC 665
+G+ GPRCE DLD+ R A+ G CV G RC G G C R C
Sbjct: 381 AGFAGPRCE-HDLDD--CAGRACANGGTCVEGGGAHRCSCALGFGGRDCRERADPC 433
>BC017568-1|AAH17568.1| 115|Homo sapiens neuregulin 4 protein.
Length = 115
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 415 CEPEYSQYYCLNGGVCFTVVISESPIYNC 501
C P + + CLNGG+C+ + SP C
Sbjct: 9 CGPSHKSF-CLNGGLCYVIPTIPSPFCRC 36
>AM392364-1|CAL35829.1| 90|Homo sapiens neuregulin 4 protein.
Length = 90
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 415 CEPEYSQYYCLNGGVCFTVVISESPIYNC 501
C P + + CLNGG+C+ + SP C
Sbjct: 9 CGPSHKSF-CLNGGLCYVIPTIPSPFCRC 36
>AY207002-1|AAO49724.1| 58|Homo sapiens neuregulin 1 isoform 4
protein.
Length = 58
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 442 CLNGGVCFTVV-ISESPIYNCECQAG 516
C+NGG CF V +S Y C+CQ G
Sbjct: 1 CVNGGECFMVKDLSNPSRYLCKCQPG 26
>AF119162-4|AAF28849.1| 844|Homo sapiens neuregulin 2 isoform 2
protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +1
Query: 412 KCEPEYSQYYCLNGGVCFTVVISESPIYNCECQAGMWARGASSRTWTTRMF*NGRQLMME 591
KC E ++ YC+NGGVC+ I +C+C G G + + F +L +
Sbjct: 344 KCN-ETAKSYCVNGGVCY--YIEGINQLSCKCPVGY--TGDRCQQFAMVNFSKAEELYQK 398
Query: 592 TASIAGGATMAVFLAIXVCL 651
G +A+ + VC+
Sbjct: 399 RVLTITGICVALLVVGIVCV 418
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,734,049
Number of Sequences: 237096
Number of extensions: 1738611
Number of successful extensions: 5228
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5225
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -