Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060663.seq
         (687 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50374| Best HMM Match : OTU (HMM E-Value=0.036)                     70   2e-12
SB_1441| Best HMM Match : I-set (HMM E-Value=0.0096)                   29   3.5  
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)        28   6.2  

>SB_50374| Best HMM Match : OTU (HMM E-Value=0.036)
          Length = 348

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = +2

Query: 14  QLAHEAKSSRQFTDLNKFTLKCMICDKFLTGQAEAQKHAKETMHTNFGE 160
           QLA +AK +RQ+T+L+KFTL+C++C+  LTGQ  AQ+HA  T HTNFGE
Sbjct: 243 QLAADAKKNRQYTNLSKFTLRCLVCNTPLTGQIAAQQHAVSTGHTNFGE 291


>SB_1441| Best HMM Match : I-set (HMM E-Value=0.0096)
          Length = 249

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 315 LIFKIISPPFHGGS*NTFQNDICGHGCYVTKTIIIL 208
           L+ K  S  FHGG+ +    +I G G   T TI +L
Sbjct: 95  LVIKTASSRFHGGTYSCVPTNILGRGSAATVTISVL 130


>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
          Length = 991

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -1

Query: 144 CIVSLACFCASACPVRNLSQIIHFSVNLLRSVNCLEDFAS*ASCSL 7
           C ++L     +A    NL + +  ++NLLR+V C  +    A+C++
Sbjct: 847 CTINLLRTATTATCTINLLRTVTCTINLLRTVTCTINLLRTATCTI 892


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,665,703
Number of Sequences: 59808
Number of extensions: 334632
Number of successful extensions: 796
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)