Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060663.seq
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   5.2  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   9.0  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   9.0  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 220 CFGYITPVSAYIVL 261
           CFGY+ P+ A +VL
Sbjct: 580 CFGYVGPIIAALVL 593


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 65  FTLKCMICDKFLTGQAEAQKHAK 133
           F +KC IC K  + + + Q H +
Sbjct: 379 FGIKCTICHKLFSQRQDYQLHMR 401


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 307 QNHKSALSRRFLKYISKRYMRTRVLCNQNNNN 212
           Q  +SAL+ +  KY S+       + N NNNN
Sbjct: 115 QQPQSALTSQSCKYASEGPSTGTNVINNNNNN 146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,775
Number of Sequences: 2352
Number of extensions: 11351
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)