Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060663.seq
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL833081-1|CAD89975.1|  341|Homo sapiens hypothetical protein pr...    84   5e-16
AL445493-2|CAH70776.1|  304|Homo sapiens YOD1 OTU deubiquinating...    84   5e-16
AL445493-1|CAH70775.1|  348|Homo sapiens YOD1 OTU deubiquinating...    84   5e-16
AK128014-1|BAC87233.1|  304|Homo sapiens protein ( Homo sapiens ...    84   5e-16

>AL833081-1|CAD89975.1|  341|Homo sapiens hypothetical protein
           protein.
          Length = 341

 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = +2

Query: 14  QLAHEAKSSRQFTDLNKFTLKCMICDKFLTGQAEAQKHAKETMHTNFGEV 163
           +LA EA+  RQFTD+N+FTL+CM+C K LTGQAEA++HAKET HTNFGEV
Sbjct: 292 ELADEARRRRQFTDVNRFTLRCMVCQKGLTGQAEAREHAKETGHTNFGEV 341


>AL445493-2|CAH70776.1|  304|Homo sapiens YOD1 OTU deubiquinating
           enzyme 1 homolog (S. cerevisiae) protein.
          Length = 304

 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = +2

Query: 14  QLAHEAKSSRQFTDLNKFTLKCMICDKFLTGQAEAQKHAKETMHTNFGEV 163
           +LA EA+  RQFTD+N+FTL+CM+C K LTGQAEA++HAKET HTNFGEV
Sbjct: 255 ELADEARRRRQFTDVNRFTLRCMVCQKGLTGQAEAREHAKETGHTNFGEV 304


>AL445493-1|CAH70775.1|  348|Homo sapiens YOD1 OTU deubiquinating
           enzyme 1 homolog (S. cerevisiae) protein.
          Length = 348

 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = +2

Query: 14  QLAHEAKSSRQFTDLNKFTLKCMICDKFLTGQAEAQKHAKETMHTNFGEV 163
           +LA EA+  RQFTD+N+FTL+CM+C K LTGQAEA++HAKET HTNFGEV
Sbjct: 299 ELADEARRRRQFTDVNRFTLRCMVCQKGLTGQAEAREHAKETGHTNFGEV 348


>AK128014-1|BAC87233.1|  304|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46133 fis, clone TESTI2051742. ).
          Length = 304

 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = +2

Query: 14  QLAHEAKSSRQFTDLNKFTLKCMICDKFLTGQAEAQKHAKETMHTNFGEV 163
           +LA EA+  RQFTD+N+FTL+CM+C K LTGQAEA++HAKET HTNFGEV
Sbjct: 255 ELADEARRRRQFTDVNRFTLRCMVCQKGLTGQAEAREHAKETGHTNFGEV 304


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,415,896
Number of Sequences: 237096
Number of extensions: 1480711
Number of successful extensions: 3071
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3071
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)