Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060663.seq
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68337-3|CAA92750.2|  712|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U97008-10|AAB52315.2|  494|Caenorhabditis elegans Cytochrome p45...    28   5.4  
AF106583-7|AAD03130.1|  299|Caenorhabditis elegans Hypothetical ...    28   5.4  
AF039049-9|AAB94248.1|  494|Caenorhabditis elegans Cytochrome p4...    28   7.2  
AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z68337-3|CAA92750.2|  712|Caenorhabditis elegans Hypothetical
           protein M7.3 protein.
          Length = 712

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = -3

Query: 391 NINKETFNQITPSQK*IYN*QSQTLFNIQNHKSALSRRFLKYISKRYMRTRVLCNQNNNN 212
           NI K T+N+  P    +   +S  L   +++K  L+ +F+   +    R R +CN+NN  
Sbjct: 290 NIQK-TWNKKCPKVLKVPQFKSYGLLRTESNKFILANKFVPISNIFDFRLREVCNKNNVT 348

Query: 211 IMKY 200
           I  +
Sbjct: 349 IQTF 352


>U97008-10|AAB52315.2|  494|Caenorhabditis elegans Cytochrome p450
           family protein 35A2 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = -3

Query: 223 NNNNIMKYRNSFVLRVNYSLDLPEVSVHCLFSVFLRLRLPGQELVT 86
           + NN+  Y ++F+L++    +  + ++  L ++ + L + GQE  T
Sbjct: 266 DENNLQDYTDAFLLKIQKEGESKDFNIETLKTMIIDLWMTGQETTT 311


>AF106583-7|AAD03130.1|  299|Caenorhabditis elegans Hypothetical
           protein F23C8.4 protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 68  TLKCMICDKFLTGQAEAQKHAKETMHTNFGE 160
           + KC  C K L        HA +T H NF E
Sbjct: 66  SFKCDDCGKLLANDDAIMFHASKTKHENFSE 96


>AF039049-9|AAB94248.1|  494|Caenorhabditis elegans Cytochrome p450
           family protein 35A5 protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -3

Query: 223 NNNNIMKYRNSFVLRVNYSLDLPEVSVHCLFSVFLRLRLPGQELVT 86
           + NN+  Y ++F+L++    D    ++  L ++   L L GQE  T
Sbjct: 266 DENNLQDYTDAFLLKIVKGEDEKNFNIQALKTMLYDLWLTGQETTT 311


>AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical
           protein T05E7.1 protein.
          Length = 474

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
 Frame = -1

Query: 681 GHFFKFLPYKTV-----LLTSTLHSFDQSVLKQRWRHP 583
           GHFFK    KT      LL  +    D+  LK+ W+HP
Sbjct: 127 GHFFKTYDPKTYYYTLQLLDDSKKIIDEIHLKKHWKHP 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,149,030
Number of Sequences: 27780
Number of extensions: 266870
Number of successful extensions: 579
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)