Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060661.seq
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 57 1e-08
SB_55442| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_50601| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 56 4e-08
SB_40904| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_16343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_33023| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_58112| Best HMM Match : Peptidase_M10 (HMM E-Value=4.3e-40) 54 1e-07
SB_18787| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_40546| Best HMM Match : Peptidase_M10 (HMM E-Value=3.5e-27) 50 1e-06
SB_55835| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_33582| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_31720| Best HMM Match : Peptidase_M10 (HMM E-Value=1e-30) 46 4e-05
SB_17010| Best HMM Match : Peptidase_M10 (HMM E-Value=6.2e-27) 45 7e-05
SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31) 45 7e-05
SB_53663| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 44 9e-05
SB_28025| Best HMM Match : Peptidase_M10 (HMM E-Value=5.1e-36) 44 1e-04
SB_22666| Best HMM Match : Peptidase_M10 (HMM E-Value=9.3e-37) 44 1e-04
SB_49022| Best HMM Match : Peptidase_M10 (HMM E-Value=9.3e-28) 43 3e-04
SB_31049| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 30 2.0
SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_380| Best HMM Match : AAA (HMM E-Value=0.14) 29 3.5
SB_18120| Best HMM Match : Colipase_C (HMM E-Value=0.87) 28 6.1
SB_57593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_43519| Best HMM Match : Pre-SET (HMM E-Value=0.37) 28 8.1
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 28 8.1
>SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 556
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/64 (45%), Positives = 34/64 (53%)
Frame = +1
Query: 316 RSVLARALDVWEQASRLTFTEVNSEEADILVSFAKRYHDDAYPFDGRGTILAHAFFPGVD 495
R + ARA +W +L E + +AD VSF H D PFDG G LAHAFFP
Sbjct: 110 RRIFARAAKLWSDKMQLNIKETSDAKADFTVSFNSYDHGDGDPFDGPGGTLAHAFFP--Q 167
Query: 496 RGGD 507
GGD
Sbjct: 168 YGGD 171
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGIQSN 680
HFDD E + E KD G +L VA HE GH+LGLSHS V + + Y G ++N
Sbjct: 173 HFDDSETYT-EGKD---AGVNLLFVAAHELGHTLGLSHSDVWQSVMAPY-YPGYKAN 224
>SB_55442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/75 (44%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Frame = +1
Query: 298 LDPYETRSVLARALDVWEQASRLTFTEVNSE-EADILVSFAKRYHDD-------AYPFDG 453
LD R + ARAL W S L+F+ N+ ADI +SF R H AY FDG
Sbjct: 47 LDKDSQRRIFARALQYWSDVSGLSFSPTNNGGSADIKISFGARSHGGPHDGNRCAYAFDG 106
Query: 454 RGTILAHAFFPGVDR 498
G +LAHAFFP R
Sbjct: 107 PGKVLAHAFFPSNGR 121
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGIQSNF 683
HFD+DE + D GT+L VA HEFGH+LGL HS V+ + Y G +NF
Sbjct: 123 HFDEDETYT----DGTPSGTNLMWVATHEFGHALGLEHSDVRNAVMYPY-YTGYVANF 175
>SB_50601| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 515
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 9/64 (14%)
Frame = +1
Query: 322 VLARALDVWEQASRLTFTE-VNSEEADILVSFAKRYHDD--------AYPFDGRGTILAH 474
V A+ALD W + S LTF+ ++ E AD+ +SF + H +YPFDG G +LAH
Sbjct: 222 VFAKALDYWARVSGLTFSRTMDGENADLKISFGPKSHGGTHDPEGTCSYPFDGPGGVLAH 281
Query: 475 AFFP 486
AFFP
Sbjct: 282 AFFP 285
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGIQSNF 683
HFD+DE + D EGT+L VA HEFGHSLGL HS V+ + Y G + F
Sbjct: 291 HFDEDE----DFTDGTYEGTNLLWVATHEFGHSLGLHHSDVRDAVMYPY-YTGYKPGF 343
>SB_40904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = +1
Query: 322 VLARALDVWEQASRLTFTE-VNSEEADILVSFAKRYHDD-AYPFDGRGTILAHAFFP 486
V A+ALD W + S L+F+ ++ + AD+ +SF + H A PFDG G +LAHAFFP
Sbjct: 130 VFAKALDYWARVSGLSFSRTMDFQNADLRISFGYKSHSGCASPFDGPGGVLAHAFFP 186
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGI 671
HFD+DE + D +GT+L VA HEFGHSLGL HS+V ++ + F Y G+
Sbjct: 192 HFDEDENFT----DGTSQGTNLLWVATHEFGHSLGLDHSNV--QSAIMFPYYGL 239
>SB_16343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 449
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 346 WEQASRLTFTEVN----SEEADILVSFAKRYHDDAYPFDGRGTILAHAFFPGVDRGGDG 510
W S+L E + ++ DIL+ F + YH D YPFDG G LAHAF+P + G G
Sbjct: 113 WTGVSKLKIREASPDLPDDKVDILIDFVRGYHGDGYPFDGPGGTLAHAFYPHNNEGISG 171
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSV 632
HFDDDE + + G +L VA+HEFGHSLG+ HS V
Sbjct: 174 HFDDDE----DFTTGKDSGINLDWVALHEFGHSLGIDHSEV 210
>SB_33023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 310 ETRSVLARALDVWEQASRLTFTEVNSE--EADILVSFAKRYHDDAYPFDGRGTILAHAFF 483
E + + AL +W + LTF EV E +I + F H D YPFDG G LAHAF+
Sbjct: 142 EVDNAIRNALAMWAAVTPLTFIEVYDPRIEVEIRIRFVTGDHGDGYPFDGPGGTLAHAFY 201
Query: 484 PGVDRGGDG 510
P + G G
Sbjct: 202 PHDNTGLSG 210
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSS 629
HFDD+E + L + G LF VAVHEFGHSLGL HSS
Sbjct: 213 HFDDEEYFTLRT----DHGIDLFWVAVHEFGHSLGLDHSS 248
>SB_58112| Best HMM Match : Peptidase_M10 (HMM E-Value=4.3e-40)
Length = 123
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +1
Query: 343 VWEQASRLTFTEVN-SEEADILVSFAKRYHDDA-YPFDGRGTILAHAFFP 486
+W S LTFT V+ + ADI ++F H + YPFDG+G++LAHAFFP
Sbjct: 1 MWSDNSNLTFTLVSDASNADIKIAFVTGTHSNCIYPFDGQGSVLAHAFFP 50
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSS 629
HFDDDE + D GT+L AVAVHE GH LG+ HSS
Sbjct: 56 HFDDDE----DFTDGVATGTNLLAVAVHEIGHILGVGHSS 91
>SB_18787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 SLLDPYETRSVLARALDVWEQASRLTFT-EVNSEEADILVSFAKRYHDDAYPFDGRGTIL 468
S + +SVL A W + L F E + ADI + F YH D+ FDG G L
Sbjct: 240 SKMSEASVKSVLTNAFRTWAEVIPLVFRWEPIATRADITIRFVTGYHGDSKSFDGPGNEL 299
Query: 469 AHAFFPGVDRGGD 507
AHAF+P GGD
Sbjct: 300 AHAFYP--QYGGD 310
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSS 629
HFDDDE W P D SL VA HE GHSLGLSHS+
Sbjct: 312 HFDDDEPWT--PSTSDATHKSLLKVATHEIGHSLGLSHST 349
>SB_40546| Best HMM Match : Peptidase_M10 (HMM E-Value=3.5e-27)
Length = 100
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGI 671
HFD+DE + D +GT+L VA HEFGHSLGL HS+V ++ + F Y G+
Sbjct: 33 HFDEDENFT----DGTSQGTNLLWVATHEFGHSLGLDHSNV--QSAIMFPYYGL 80
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 418 KRYHDDAYPFDGRGTILAHAFFPGVDR 498
K + A PFDG G +LAHAFFP R
Sbjct: 5 KSHSGCASPFDGPGGVLAHAFFPNDGR 31
>SB_55835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +1
Query: 322 VLARALDVWEQASRLTFTEVNSE-EADILVSFAKRYHDD------AYPFDGRGTILAHAF 480
V +AL W S+L+F+ AD+ +SF H AYPFDGRG +LAHAF
Sbjct: 445 VFEKALQFWADVSKLSFSRTRYVWNADLKISFGSVTHRGPGESHCAYPFDGRGKVLAHAF 504
Query: 481 FP 486
+P
Sbjct: 505 YP 506
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVK 635
HFDDDE + D +G +L VA HEFGH+LGL HS+V+
Sbjct: 512 HFDDDETYT----DGISDGINLLWVATHEFGHALGLEHSNVR 549
>SB_33582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Frame = +1
Query: 322 VLARALDVWEQASRLTFTEVNS-EEADILVSFAKRYHDD------AYPFDGRGTILAHAF 480
V +AL W S L+F+ V+ +AD+ +SF R H+ PFDG G +LAHA+
Sbjct: 303 VFEKALKFWSDGSALSFSRVSDVSKADLKISFGSRSHNGPGESRCGSPFDGPGRVLAHAY 362
Query: 481 FPGVDR 498
FP R
Sbjct: 363 FPSNGR 368
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGIQSNF 683
HFD+DE + D G +L VA HEFGH+LGL HS V+ + Y G + F
Sbjct: 370 HFDEDERYT----DGASSGINLLWVATHEFGHALGLHHSDVRNAVMYPY-YTGYKPGF 422
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVK 635
HFDDDE + D GT+L A+AVHE GH LG++HS+ K
Sbjct: 915 HFDDDETFT----DGVNTGTNLLAIAVHEIGHILGIAHSTDK 952
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 316 RSVLARALDVWEQASRLTFT-EVNSEEADILVSFAKRYHDDAYP-FDGRGTILAHAFFPG 489
++V+A+A +W S FT + +A I + F H + FDG G ++AHA++P
Sbjct: 851 KAVIAKAFKMWSDVSPFIFTLTTDKTKAHIKILFGTNTHGNCLKAFDGPGKVIAHAYYPS 910
Query: 490 VDR 498
R
Sbjct: 911 DGR 913
>SB_31720| Best HMM Match : Peptidase_M10 (HMM E-Value=1e-30)
Length = 284
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGIQSNF 683
HFD+DE + D EG +L VA HEFGHSLGL H+ V+ + Y G + F
Sbjct: 184 HFDEDE----DFTDGTSEGMNLLWVATHEFGHSLGLRHTDVQDAVMFPY-YTGYEPGF 236
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 439 YPFDGRGTILAHAFFP 486
+PFDG G LAHAF+P
Sbjct: 163 HPFDGPGNTLAHAFYP 178
>SB_17010| Best HMM Match : Peptidase_M10 (HMM E-Value=6.2e-27)
Length = 107
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGIQSNF 683
HFD+DE + D +GT+L VA HEFGHSL L HS V+ + Y G + F
Sbjct: 40 HFDEDEKFT----DGTSDGTNLLWVATHEFGHSLCLHHSDVRDAVMYPY-YTGYKPGF 92
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 436 AYPFDGRGTILAHAFFP 486
AYPFDG G ILAHAFFP
Sbjct: 18 AYPFDGPGGILAHAFFP 34
>SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31)
Length = 273
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSS 629
HFDDDE + D GT+L AVAVHE GH LG+ HSS
Sbjct: 140 HFDDDE----DFTDGVATGTNLLAVAVHEIGHILGVGHSS 175
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 421 RYHDDA-YPFDGRGTILAHAFFP 486
R H + YPFDG+G++LAHAFFP
Sbjct: 112 RTHSNCIYPFDGQGSVLAHAFFP 134
>SB_53663| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 684
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVK 635
HFD+DE + D G +L VAVHEFGH+LGL HS V+
Sbjct: 132 HFDEDETFTHNSYD----GVNLLWVAVHEFGHNLGLGHSDVQ 169
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVK 635
HFD+DE + D G +L VAVHEFGH+LGL HS V+
Sbjct: 356 HFDEDETFTHNSYD----GVNLLWVAVHEFGHNLGLEHSDVQ 393
>SB_28025| Best HMM Match : Peptidase_M10 (HMM E-Value=5.1e-36)
Length = 219
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVK 635
HFD+DE + D G +L VAVHEFGH+LGL HS V+
Sbjct: 98 HFDEDETFTHNSYD----GINLLWVAVHEFGHNLGLDHSDVQ 135
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 442 PFDGRGTILAHAFFPGVDRGGDGTLMMTNSGC*SPKMTMKKAHHF 576
PFDG G LAHA G D D T++ + H F
Sbjct: 79 PFDGEGGTLAHASLAGADAHFDEDETFTHNSYDGINLLWVAVHEF 123
>SB_22666| Best HMM Match : Peptidase_M10 (HMM E-Value=9.3e-37)
Length = 359
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVK 635
HFD+DE + D G +L VAVHEFGH+LGL HS V+
Sbjct: 98 HFDEDETFTHNSYD----GINLLWVAVHEFGHNLGLDHSDVQ 135
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 442 PFDGRGTILAHAFFPGVDRGGDGTLMMTNSGC*SPKMTMKKAHHF 576
PFDG G LAHA G D D T++ + H F
Sbjct: 79 PFDGEGGTLAHASLAGADAHFDEDETFTHNSYDGINLLWVAVHEF 123
>SB_49022| Best HMM Match : Peptidase_M10 (HMM E-Value=9.3e-28)
Length = 122
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 510 HFDDDELWLLEPKDDDEEGTSLFAVAVHEFGHSLGLSHSSVK 635
HFD+DE + G +L VA HEFGHSLGL HS+V+
Sbjct: 32 HFDEDETFT----HGTSSGINLMWVAAHEFGHSLGLGHSNVQ 69
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 439 YPFDGRGTILAHAFFPGVDR 498
+ FDG G +LAHA+FP R
Sbjct: 11 FDFDGPGKVLAHAYFPSDGR 30
>SB_31049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 298 LDPYETRSVLARALDVWEQASRLTFTEVNSEEAD 399
L P ET SVLAR L +W ++ +++VN++ D
Sbjct: 111 LSPEET-SVLARGLTIWPTRRKIDWSQVNADICD 143
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 561 EGTSLFAVAVHEFGHSLGLSHSSVKRRTDVXFGYQGIQSN 680
+G + +HEFGH++G HS+ + + G S+
Sbjct: 186 DGCQYVGLVLHEFGHAIGYFHSTTDQTATTPSTFSGTTSS 225
>SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 582 VAVHEFGHSLGLSHS 626
+A+HE GHSLGL+H+
Sbjct: 126 IAMHEIGHSLGLAHT 140
>SB_380| Best HMM Match : AAA (HMM E-Value=0.14)
Length = 508
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 24 EEEERANRRQEKTRSYALRRS 86
+EEERA RR+EK +A RR+
Sbjct: 334 KEEERARRREEKLAEFAARRA 354
>SB_18120| Best HMM Match : Colipase_C (HMM E-Value=0.87)
Length = 363
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 18 SPEEEERANRRQEKTRSYALRRSSHEDRVNAI 113
+PEE ++A R+E +S RRS+ E+R AI
Sbjct: 315 NPEERDKAIPRRETKQSRGERRSNPEERDKAI 346
>SB_57593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 3 ARVKTSPEEEERANRRQEKTRSYALRRSSHEDRVNA 110
+R + ++RAN RQ++ S R +S +DR N+
Sbjct: 5 SRQDRANSRQDRANSRQDRANSRQDRANSRQDRANS 40
>SB_43519| Best HMM Match : Pre-SET (HMM E-Value=0.37)
Length = 829
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 72 ALRRSSHEDRVNAILKPSLFSSNQ 143
ALR+ H ++ N I+KP+L +S+Q
Sbjct: 603 ALRKQDHVEKENDIVKPALVTSDQ 626
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +3
Query: 6 RVKTSPEEEERANRRQEKTRSYALRRSSHEDRVNAILKPSLFSS----NQSQHPFRDSHC 173
R S EE++R EK ++ RS+ N+ L P++F S N PF D HC
Sbjct: 62 RFVDSAEEDDRLGGGTEKYKTQIEIRSNG---YNSWLSPAMFKSTCDVNTRYFPFDDQHC 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,676,193
Number of Sequences: 59808
Number of extensions: 515886
Number of successful extensions: 1850
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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