Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060660.seq
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    25   0.76 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 432 ENEGNCRSLSRQNCAECSYHGSRVLHDSSKTSHKRCSN 545
           EN  NC  L ++ C        RVL D+ KTS  +C++
Sbjct: 43  ENYVNCL-LEKKPCTPDGEELKRVLPDALKTSCAKCTD 79


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 346 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 471
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 118 LPAREGGDHRQRPGQQDH 171
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
 Frame = +3

Query: 417 FH-GAYENEGNCRSL------SRQNCAECSYHGSRVLHDSSKTSHKRC 539
           FH GA+  EG C+S       +  + +EC  +G  V++  ++T+ K C
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKAC 61


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 308 CTVASSNLRPMRRLASNICCWGSSPP 231
           CT  + N R  R     I C  ++PP
Sbjct: 14  CTYGNVNYRQRRSQPLKISCLKTTPP 39


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = -2

Query: 491 VITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCF-M 315
           +ITAF +VLP+ A  +++ F     L    K   +   Y +  + +  ++   +  C+ +
Sbjct: 87  LITAFLSVLPQLAWDITYRFYGGFLLCKVVKYGQTLGPYLSSYVLMATAIDRHQAICYPL 146

Query: 314 SACTVASSNLRPMRRLA 264
           + C+  S   + M  LA
Sbjct: 147 TYCSWTSRRSKVMVYLA 163


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 117 TPTQEYVVPRSIPT 76
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,741
Number of Sequences: 336
Number of extensions: 3614
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)