Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060660.seq
(681 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 159 3e-40
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 152 5e-38
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 138 7e-34
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 136 2e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 102 4e-23
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 56 5e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 44 2e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 32 0.088
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.82
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 1.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.3
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.7
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 159 bits (387), Expect = 3e-40
Identities = 86/146 (58%), Positives = 99/146 (67%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P IFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYFMTLQRQATKDAVTISGLKRSPNSFNETHCCCR 603
VL KM+ETAEAYLG V +AV+TVPAYF QRQATKDA I+GL NE
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGL-NVLRIINEP-TAAA 178
Query: 604 FAYGXDKKGYLKNGNVLYLXTSAGGT 681
AYG D+ NVL + GGT
Sbjct: 179 IAYGLDRSNQ-GESNVL-IFDLGGGT 202
Score = 115 bits (276), Expect = 7e-27
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 152 bits (368), Expect = 5e-38
Identities = 82/146 (56%), Positives = 98/146 (67%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P IFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYFMTLQRQATKDAVTISGLKRSPNSFNETHCCCR 603
VL KM+E+AEA+LG V +AV+TVPAYF QRQATKDA I+GL NE
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGL-NVLRIINEP-TAAA 178
Query: 604 FAYGXDKKGYLKNGNVLYLXTSAGGT 681
AYG D+ + NVL + GGT
Sbjct: 179 IAYGLDRSNQHET-NVL-IFDLGGGT 202
Score = 115 bits (276), Expect = 7e-27
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 138 bits (334), Expect = 7e-34
Identities = 77/146 (52%), Positives = 93/146 (63%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ +FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYFMTLQRQATKDAVTISGLKRSPNSFNETHCCCR 603
VLTKMKE +EA L K V+ AVITVPAYF QR ATKDA I+GL NE
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGL-NVLRIINEP-TAAA 182
Query: 604 FAYGXDKKGYLKNGNVLYLXTSAGGT 681
AYG D K K NVL + GGT
Sbjct: 183 IAYGLDAKSD-KPKNVL-IFDLGGGT 206
Score = 102 bits (245), Expect = 4e-23
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 136 bits (330), Expect = 2e-33
Identities = 69/127 (54%), Positives = 89/127 (70%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYFMTLQRQATKDAVTISGLKRSPNSFNETHCCCR 603
+L+KMK+TAEAYLGK V +AV+TVPAYF QRQATKDA TI+GL NE
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGL-NVIRIVNEP-TAAA 211
Query: 604 FAYGXDK 624
AYG DK
Sbjct: 212 IAYGLDK 218
Score = 100 bits (240), Expect = 2e-22
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP N
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPEN 96
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 102 bits (245), Expect = 4e-23
Identities = 60/146 (41%), Positives = 81/146 (55%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYFMTLQRQATKDAVTISGLKRSPNSFNETHCCCR 603
+L+KM+ETA YLGK V+NAV+TVPAYF QRQATK A I+GL NE
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGL-NVLRVVNEP-TAAA 224
Query: 604 FAYGXDKKGYLKNGNVLYLXTSAGGT 681
AYG DK KN ++ + GGT
Sbjct: 225 LAYGLDK----KNDAIVAVFDLGGGT 246
Score = 76.2 bits (179), Expect = 4e-15
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 65 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 241
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 242 NPNNKY 259
NP N +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 56.0 bits (129), Expect = 5e-09
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +1
Query: 268 KRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 444
KRL GR ++D ++ + ++ G KV Y E+ F ++ + TK+K
Sbjct: 72 KRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKA 131
Query: 445 TAEAYLGKTVQNAVITVPAYFMTLQRQATKDAVTISGLKRSPNSFNETHCCCRFAYGXDK 624
AEA L +V + VI++PA+F +QR+A +A I+GL +P + YG K
Sbjct: 132 IAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGL--NPLRLMNDNAAAALTYGITK 189
Score = 52.0 bits (119), Expect = 8e-08
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +2
Query: 62 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 241
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 242 NPNN 253
N N
Sbjct: 63 NFRN 66
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADN 85
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 385 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLQRQATKDAVTISGL 558
++K E S L ++ E+AE +LG V V++VP YF QR+A + A +GL
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGL 191
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 31.9 bits (69), Expect = 0.088
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVS 417
P I + K L+ E VQ +P + + + +++ +++ + EE+
Sbjct: 82 PAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEII 141
Query: 418 SMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLQRQATKDAVTI 549
+M + AE + + + V+TVP +F LQR +A I
Sbjct: 142 AMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARI 185
Score = 29.9 bits (64), Expect = 0.36
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFP-- 82
Query: 254 KYSMPNV 274
+S+ NV
Sbjct: 83 AHSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.82
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 69 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 164
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 173 PSYVAFTDTERLIGDAAKNQVAMNPNNKYSMPNVSSDVSSKMLLC 307
P +A T ER++ AAK A+N Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.3
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Frame = -2
Query: 488 ITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPL-----------YATLILGLPPSL 342
I++ T+L + S + +S+ + S +LSS + Y++ ++ +L
Sbjct: 618 ISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTL 677
Query: 341 TTSKGQCFMSACTVASSNLRPMRRLASNICCWGSS 237
+S +S+ VASS+ P+ +S + + +S
Sbjct: 678 VSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSAS 712
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 7.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 55 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 234
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 235 GDEPQQ 252
++P++
Sbjct: 532 -EKPEE 536
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 7.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 155 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 51
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,908,112
Number of Sequences: 5004
Number of extensions: 62166
Number of successful extensions: 221
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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