Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060657.seq
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6LF21 Cluster: Putative DNA polymerase i; n=1; Plasmod... 36 0.70
UniRef50_Q22NX5 Cluster: Tubulin-tyrosine ligase family protein;... 36 1.2
UniRef50_UPI0000499358 Cluster: hypothetical protein 222.t00003;... 35 1.6
UniRef50_Q54QZ7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q6QXE3 Cluster: ORF24; n=1; Agrotis segetum granuloviru... 34 2.8
UniRef50_Q86BM5 Cluster: CG13388-PD, isoform D; n=6; Drosophila ... 34 2.8
UniRef50_A0CJH0 Cluster: Chromosome undetermined scaffold_2, who... 34 2.8
UniRef50_Q54VG5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q23TZ7 Cluster: Cyclic nucleotide-binding domain contai... 34 3.7
UniRef50_UPI000150A42E Cluster: hypothetical protein TTHERM_0054... 33 4.9
UniRef50_Q9TM11 Cluster: Putative uncharacterized protein menA; ... 33 4.9
UniRef50_Q9VAS9 Cluster: CG1451-PA; n=2; Drosophila melanogaster... 33 4.9
UniRef50_O80500 Cluster: Putative uncharacterized protein At2g44... 33 6.5
UniRef50_Q8T2A5 Cluster: Similar to Dictyostelium discoideum (Sl... 33 6.5
UniRef50_Q8IR84 Cluster: CG32656-PA; n=2; Drosophila melanogaste... 33 6.5
UniRef50_Q23J97 Cluster: FHA domain containing protein; n=1; Tet... 33 6.5
UniRef50_A2G0E8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A2EJ44 Cluster: Viral A-type inclusion protein, putativ... 33 6.5
UniRef50_P07663 Cluster: Period circadian protein; n=132; Dipter... 33 6.5
UniRef50_UPI00006CB34B Cluster: hypothetical protein TTHERM_0045... 33 8.6
UniRef50_Q7W1W5 Cluster: Cyclic nucleotide-binding protein; n=3;... 33 8.6
UniRef50_Q1FGU2 Cluster: Phosphoesterase, PA-phosphatase related... 33 8.6
UniRef50_Q7RF46 Cluster: Putative uncharacterized protein PY0486... 33 8.6
UniRef50_Q236R4 Cluster: Putative uncharacterized protein; n=2; ... 33 8.6
UniRef50_A0E6B6 Cluster: Chromosome undetermined scaffold_8, who... 33 8.6
>UniRef50_Q6LF21 Cluster: Putative DNA polymerase i; n=1; Plasmodium
falciparum 3D7|Rep: Putative DNA polymerase i -
Plasmodium falciparum (isolate 3D7)
Length = 1444
Score = 36.3 bits (80), Expect = 0.70
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 16 YPEVEMLIPHYNERLVATDSDLNLKSKDQPEHENNDIKNSRVTPPPQFQDKQKTPYESHT 195
Y E L+ H NE S L+ K+K+Q H NN+I N +++ K + +
Sbjct: 264 YDFKESLLEHINESSQLNHSILSHKTKEQTHHTNNNI-NGNYNNDEHIEEEGKAKTKQN- 321
Query: 196 KTDKNLTHDSKREKLKFREE 255
KT ++ + K++ K ++E
Sbjct: 322 KTKNSIIEEKKKKTKKKKDE 341
>UniRef50_Q22NX5 Cluster: Tubulin-tyrosine ligase family protein;
n=1; Tetrahymena thermophila SB210|Rep: Tubulin-tyrosine
ligase family protein - Tetrahymena thermophila SB210
Length = 970
Score = 35.5 bits (78), Expect = 1.2
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +3
Query: 135 QSNPTASIPRQTENPIRIPYKNRQKLNTRFET*KIKVPRR-DLNFADVQLDLACMSTPKM 311
Q+N S+ + T N + K QK+ T +E + P+R LN+++ + ++
Sbjct: 243 QNNGQVSLQQLTRNSQQNQIKTFQKIKTFYEGKQSYSPKRGTLNYSENGIQGVKITQQLP 302
Query: 312 LAPDEFMNGRNSGRQNQSRTNLMTDFNRSRVVXNNQNEILYRE-RSIDQTQLE 467
+ +F N +N Q+ RT +++ N Q EIL ++ S++QTQL+
Sbjct: 303 VYSTKFQNNKNQKFQSHFRTPKNDEYSE-----NLQEEILKKQSASMNQTQLQ 350
>UniRef50_UPI0000499358 Cluster: hypothetical protein 222.t00003;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 222.t00003 - Entamoeba histolytica HM-1:IMSS
Length = 152
Score = 35.1 bits (77), Expect = 1.6
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 EVEMLIPHYNERLVATDSDLNLKSKDQPEHENNDIKNSRVTP-PPQFQDKQKTPYESHTK 198
E+ + HY E L+ +DS + + QP HE I + + P P F YE K
Sbjct: 63 ELHLSKKHYEEELICSDSFVQPEYPTQP-HEKRTIFSPVMFPMAPSFPPVIFPSYEEKEK 121
Query: 199 TDKNLTHDSKREKLKFR 249
TDK L KFR
Sbjct: 122 TDKQLIVPLNEALKKFR 138
>UniRef50_Q54QZ7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 147
Score = 35.1 bits (77), Expect = 1.6
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 294 MSTPKMLAPDEFMNGRNSGRQNQSRTNLMTDFNRSRVVXNNQNEILYRERSIDQTQL--E 467
M TP + + F N N+ N + N + N + NN N+ E + DQ + E
Sbjct: 1 MRTPNYINNNYFNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQTNLNEENNDQYDMMRE 60
Query: 468 RLXERKXEPVQHWLVTL-SGLTR 533
L R + L+T+ +G+TR
Sbjct: 61 NLKIRNITVILKLLITMKAGITR 83
>UniRef50_Q6QXE3 Cluster: ORF24; n=1; Agrotis segetum
granulovirus|Rep: ORF24 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 362
Score = 34.3 bits (75), Expect = 2.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 52 ERLVATDSDLNLKSKDQPEHENNDIKNSRVTPPPQFQDKQKTP 180
E+ D D + S D+ E+ ++K VTPPP+ + K P
Sbjct: 134 EKTNGNDDDNSSSSSDEESEEDVEVKKEEVTPPPKSKKPNKAP 176
>UniRef50_Q86BM5 Cluster: CG13388-PD, isoform D; n=6; Drosophila
melanogaster|Rep: CG13388-PD, isoform D - Drosophila
melanogaster (Fruit fly)
Length = 837
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 97 DQPEHENNDIKNSRVTPPP-----QFQDKQKTPYESHTKTDKNLTHDSK 228
D+P H+N N TPPP + + Q+ +HT+TD H+SK
Sbjct: 314 DEPPHQNGT--NGTTTPPPTPVATEIEKGQQIEVNNHTRTDNTTQHNSK 360
>UniRef50_A0CJH0 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_2,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1279
Score = 34.3 bits (75), Expect = 2.8
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 RHEVGYPEVEMLIPHYNERLVATDSDLNLKSKDQPEHEN----NDIKNSRVTPPPQFQDK 168
++E +VE H NE+ + +LN ++++Q +H+N N+ N +V Q Q++
Sbjct: 600 QNEESNEQVENQNQHQNEQ--KQNEELNEQTENQDQHQNEQKQNEESNEQVENKDQHQNE 657
Query: 169 QKTPYESHTKTDKNLTHDSKREKLKFREE 255
QK E + +T+ D + +LK EE
Sbjct: 658 QKQNEELNEQTE---NQDQNQNELKQNEE 683
>UniRef50_Q54VG5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 321
Score = 33.9 bits (74), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 61 VATDSDLNLKSKDQPEHENNDIKNSRVTPPPQFQDKQKTPYESHTKT 201
+ +DS+L KS D+ E + +NSR+TP TP + T T
Sbjct: 167 IGSDSELTSKSNDEQETVKSPSRNSRITPKRNSNTGSSTPTTTTTTT 213
>UniRef50_Q23TZ7 Cluster: Cyclic nucleotide-binding domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 911
Score = 33.9 bits (74), Expect = 3.7
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +3
Query: 144 PTASIPRQTENPIRIPYKNRQKLNTRFET*KIKVPRRDLNFADVQLDLACMSTPKML--A 317
PT QT N R + +Q + +T K K LNF L+L +S K+L +
Sbjct: 558 PTRIQSLQTLNSPRSVDQFQQSSFAQVKTPKKKGQELKLNFNLPILNLEKLSQEKLLEYS 617
Query: 318 PDEFMNG--RNSGRQNQSRTNLMTDFNRSRVVXNNQN 422
P ++N RNS RQ +S++ +TD N V ++ N
Sbjct: 618 PRRYLNKNLRNSNRQKKSQSEHITDQNDQYVSLDSSN 654
>UniRef50_UPI000150A42E Cluster: hypothetical protein
TTHERM_00540200; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00540200 - Tetrahymena
thermophila SB210
Length = 605
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 70 DSDLNLKSKDQPEHENNDIKNSRVTPPPQFQDKQKTPYESHTKTDKNLTHDSKREKLKFR 249
DS LN+ + +H ++K S + Q +++ PY+ KT + ++EK K
Sbjct: 293 DSQLNINREKNRDHPQKNMKKSDKSQCKYLQKQKQKPYQQTEKTSQKALQKMQKEKHKSH 352
Query: 250 EEI*ILLMYN 279
+ L YN
Sbjct: 353 KNSEQELEYN 362
>UniRef50_Q9TM11 Cluster: Putative uncharacterized protein menA;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein menA - Cyanidium caldarium
Length = 306
Score = 33.5 bits (73), Expect = 4.9
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Frame = -3
Query: 484 FLSXRRSNWVWSILLSLYKISFWLFXTTLLRLKSVIRLVRDWFCLPLFLPFMNSSGASIF 305
FL+ R + SI L+ +SF ++L +I L+ + CL +F F N +
Sbjct: 13 FLASRFQTLLISISSLLFNLSFVYRQYQKIKLVYIILLLCLFVCLQIFANFTNDYFDEVS 72
Query: 304 GVDMHAKSNCTSAKFKSLLGTLIFH----VSNRVLSFCRFLYGIRMGFS----VCLGIEA 149
GV+ +K +F LG+ I H VS +++F L + + + + + +
Sbjct: 73 GVE--SKFRLGPKRFTLRLGSFIMHFYLSVSLLLITFILILLLLSVDYGSIKHIIFSLMS 130
Query: 148 VGLLCCF 128
GL CF
Sbjct: 131 SGLFICF 137
>UniRef50_Q9VAS9 Cluster: CG1451-PA; n=2; Drosophila melanogaster|Rep:
CG1451-PA - Drosophila melanogaster (Fruit fly)
Length = 2417
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 49 NERLVATDSDLNLKSKDQPEHENNDIKNSRVTPPPQFQDKQKTPYE-SHTKTDKNLTHD 222
N+ +V TD+D+ K + Q E E+ + PP Q +TP S + +L HD
Sbjct: 933 NQAIVGTDADIKPKLEKQEEQESQPAEQVLTKPPTQANSALETPLMFSRRSSMDSLVHD 991
>UniRef50_O80500 Cluster: Putative uncharacterized protein
At2g44600; n=3; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At2g44600 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 313
Score = 33.1 bits (72), Expect = 6.5
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 106 EHENNDIKNSRVTPPPQFQDKQKTPYESHTKTD 204
E+++ND ++SR++PPP + +PY + K+D
Sbjct: 36 ENDDNDHRHSRISPPPLLFPRSVSPYVAPRKSD 68
>UniRef50_Q8T2A5 Cluster: Similar to Dictyostelium discoideum (Slime
mold). MkpA protein; n=2; Dictyostelium discoideum|Rep:
Similar to Dictyostelium discoideum (Slime mold). MkpA
protein - Dictyostelium discoideum (Slime mold)
Length = 837
Score = 33.1 bits (72), Expect = 6.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 58 LVATDSDLNLKSKDQPEHENNDIKNSRVTPPPQFQDKQK 174
L A+ S LN S + NN++ + +PPPQ Q +Q+
Sbjct: 281 LSASSSSLNSNSGSNVDDNNNNVNTTTTSPPPQQQQQQQ 319
>UniRef50_Q8IR84 Cluster: CG32656-PA; n=2; Drosophila
melanogaster|Rep: CG32656-PA - Drosophila melanogaster
(Fruit fly)
Length = 1040
Score = 33.1 bits (72), Expect = 6.5
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 37 IPHYNERLVATDSDL--NLKSKDQPEHENNDIKNSRVTPPPQFQDKQKTPYESHTKTDK- 207
+P NE DS+ + KSKD+P+ D + P ++K+K E + K K
Sbjct: 872 VPASNENASVEDSNKASSEKSKDKPK-SGEDQSKEQEQKKPSSEEKEKDSKEKNDKDSKE 930
Query: 208 NLTHDSKREKLKFREE 255
+DSK +K K +EE
Sbjct: 931 KKDNDSKDKKDKSKEE 946
>UniRef50_Q23J97 Cluster: FHA domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: FHA domain containing
protein - Tetrahymena thermophila SB210
Length = 776
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 91 SKDQPEHENNDIKNSRVTPPPQFQDKQKTPYESHTKTDKNLTHDSKREKLKFREE 255
SKD+ + + + K+++ + P+ DKQ +S KTDK L ++ REE
Sbjct: 668 SKDRKKQDEQNNKSNKASELPKKSDKQ-ADKDSKAKTDKQLAEKQSENQVSKREE 721
>UniRef50_A2G0E8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 489
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 70 DSDLNLKSKDQPEHENNDIKNSRVTPPPQFQDKQKTP---YESHTKTDKN 210
DSD + +K H + D S+ PP + KTP +ESHT T N
Sbjct: 322 DSDSHSHTKSVESHNSLDNSPSKNEEPPSKDESTKTPTKDFESHTSTSTN 371
>UniRef50_A2EJ44 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type
inclusion protein, putative - Trichomonas vaginalis G3
Length = 676
Score = 33.1 bits (72), Expect = 6.5
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +1
Query: 49 NERLVATDSDLN-LKSKDQPEHENNDIKNSRVTPPPQFQDKQKTPYESHTKTDKNLT--- 216
NE+L+A +SD+N LKS+ + ++ NS+++ Q DK K + T + L+
Sbjct: 285 NEKLLAAESDINDLKSQIESNNQQISEYNSQISELQQKVDKYKVSNDQLTASQAELSQKL 344
Query: 217 HDSKREKLKFREE 255
DS E K + E
Sbjct: 345 EDSTSEIEKLKSE 357
>UniRef50_P07663 Cluster: Period circadian protein; n=132;
Diptera|Rep: Period circadian protein - Drosophila
melanogaster (Fruit fly)
Length = 1224
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 7 EVGYPEVEMLIPHYNERLVATDSDLNLKSKDQPEHENNDIKNSRVTPP 150
EV ++++ +PH NE L ++ D + + P H+ D K+S TPP
Sbjct: 566 EVSRADLKLELPHENE-LTVSERDSVMLGEISPHHDYYDSKSSTETPP 612
>UniRef50_UPI00006CB34B Cluster: hypothetical protein
TTHERM_00459380; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00459380 - Tetrahymena
thermophila SB210
Length = 679
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +3
Query: 336 GRNSGRQNQSRTNLMTDFNRSRVVXNNQNEILYRERSIDQTQLERLXERKXEPVQHW 506
G+N+ QN+S +M D R + + + E E+ +++ + + + ER+ E Q W
Sbjct: 151 GKNANNQNKSIHEIMDDIQRVKQIRQQRKE---DEKRLEEMRNKAIQEREEEQYQQW 204
>UniRef50_Q7W1W5 Cluster: Cyclic nucleotide-binding protein; n=3;
Bordetella|Rep: Cyclic nucleotide-binding protein -
Bordetella parapertussis
Length = 236
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 399 RVVXNNQNEILYRERSIDQTQLERLXERKXEPVQHWLVTLSGLTRVN 539
RV+ Q + R+ ++ Q Q + ERK E Q W+ LSGL +V+
Sbjct: 15 RVLDAAQKLRVERDIAVQQVQAGTIIERKGELAQVWIGVLSGLVKVS 61
>UniRef50_Q1FGU2 Cluster: Phosphoesterase, PA-phosphatase related;
n=1; Clostridium phytofermentans ISDg|Rep:
Phosphoesterase, PA-phosphatase related - Clostridium
phytofermentans ISDg
Length = 299
Score = 32.7 bits (71), Expect = 8.6
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = -3
Query: 460 WVWSILLSLYKISFWLFXTTLL--RLKSVIRLVRDWFCLPLFLPFMNSSGASIFGVDMHA 287
W ++ L+ Y+ISF F + +L LK R+ R W PLF P ++ A+
Sbjct: 44 WCYNKKLA-YRISFGFFLSAILVQGLKITFRIPRPWIKDPLFKPVEDAINAA---TGYSF 99
Query: 286 KSNCTSAKFKSLLGTLIFHVSNRVLSFCRFLYGIRMGFS-VCLGI 155
S T A +L GTL R FL +G S + LG+
Sbjct: 100 PSGHTQAA-TALYGTLALATKKRASKIMLFLVIAMVGLSRMYLGV 143
>UniRef50_Q7RF46 Cluster: Putative uncharacterized protein PY04864;
n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04864 - Plasmodium yoelii yoelii
Length = 1123
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 348 GRQNQSRTNLMTDFNRSRVVXNNQNEILYRERSID-QTQLERL 473
G +N +TNL T+ N+S + N+ N+ +Y + S D TQ+E +
Sbjct: 470 GDENMYKTNLNTENNKSINIINSMNKDVYEQNSGDIHTQVENI 512
>UniRef50_Q236R4 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2673
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Frame = +1
Query: 4 HEVGYPEVEMLIPHYNERLVATDSDLNLKSKDQPEHENNDIKNS--------RVTPPPQF 159
++V P L+P++N + T LNL+ ++ P++ +N + NS ++ PPQF
Sbjct: 167 NQVPAPPSAFLMPNFNMNQIPTPPSLNLQ-QNIPQNNSNFLNNSQNQNQNQYQIYAPPQF 225
Query: 160 QDKQK 174
Q +Q+
Sbjct: 226 QQQQQ 230
>UniRef50_A0E6B6 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_8,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 319
Score = 32.7 bits (71), Expect = 8.6
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 69 RQRPKSKIEGPT*TRK*RHQKQQSNPTASIPRQTENPIRIPYKNRQKLNTRFET*KIKVP 248
+QRPK + RK ++Q QSN T P++ +N + ++R+K + + K K
Sbjct: 129 KQRPKQE------NRKQQNQSNQSNQTNQEPQKKQNQHKQKDQDREKAQNQVHSEKTKEQ 182
Query: 249 RRDLNFADVQL---DLACMSTPKMLAPDEFMNGRNSGRQNQSRTNLMTDFNRSRVVXNNQ 419
+ ++ + D + + D N R++ ++NQ R + NR +NQ
Sbjct: 183 EQQEQEDELYVEKKDQQLTNEVNNTSDDPKTNDRDANQRNQ-RDRKYNNKNRKNQKKDNQ 241
Query: 420 NE 425
N+
Sbjct: 242 NQ 243
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,601,274
Number of Sequences: 1657284
Number of extensions: 12202436
Number of successful extensions: 39863
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 37163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39777
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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