Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060656.seq
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        24   3.9  
EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.       24   5.2  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   9.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.0  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 327 EEGVESATETISFFDKIGSR 268
           EEG E A  T +  D+IGS+
Sbjct: 444 EEGTEGAAATSALVDRIGSQ 463


>EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.
          Length = 70

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 360 EVELFDTLGDTEEGVESATETISFFDKIGS 271
           E+    TL   E+G E    T +  D+IGS
Sbjct: 9   EIVTHVTLDVNEQGTEGGAVTAALIDRIGS 38


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +2

Query: 542 APQSYGEAEHTDARDRRICHSRRRENHFAVNRP 640
           AP+S  +A+H  +++R++ +    ++ +  NRP
Sbjct: 121 APRSVVKAKHPKSQERKVAYGEGTDDDY--NRP 151


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +2

Query: 485  SRARNVLRSYQPSRCTRQRAPQSYGEAEHTDARDRRICHSRRRENHFAVNRPLTRMGLTK 664
            SRAR +    +  R  RQ+      E +   A DRR     RR+ H      L R    +
Sbjct: 828  SRARKI---DEEERSLRQKQELEREEFKRRQAEDRRRMEEMRRKAH--EEMLLKRQEYKE 882

Query: 665  KTK 673
            KTK
Sbjct: 883  KTK 885


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,237
Number of Sequences: 2352
Number of extensions: 14229
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)