Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060656.seq
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein. 38 0.025
BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein. 38 0.025
AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic... 38 0.025
AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein ... 38 0.025
AF380154-1|AAM46139.1| 964|Homo sapiens early development regul... 38 0.025
U89278-1|AAC51170.1| 433|Homo sapiens polyhomeotic 2 homolog pr... 38 0.044
U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog pr... 38 0.044
BX640639-1|CAE45787.1| 610|Homo sapiens hypothetical protein pr... 38 0.044
BC130630-1|AAI30631.1| 830|Homo sapiens PHC2 protein protein. 38 0.044
BC110863-1|AAI10864.2| 323|Homo sapiens polyhomeotic homolog 2 ... 38 0.044
BC092492-1|AAH92492.1| 405|Homo sapiens PHC2 protein protein. 38 0.044
BC073964-1|AAH73964.1| 957|Homo sapiens PHC1 protein protein. 38 0.044
BC068573-1|AAH68573.1| 405|Homo sapiens PHC2 protein protein. 38 0.044
BC029269-1|AAH29269.1| 323|Homo sapiens polyhomeotic homolog 2 ... 38 0.044
BC028396-1|AAH28396.3| 323|Homo sapiens polyhomeotic homolog 2 ... 38 0.044
BC017748-1|AAH17748.1| 447|Homo sapiens PHC1 protein protein. 38 0.044
BC002871-1|AAH02871.2| 481|Homo sapiens PHC1 protein protein. 38 0.044
AL513327-5|CAI13957.1| 858|Homo sapiens polyhomeotic homolog 2 ... 38 0.044
AL513327-4|CAI13956.1| 464|Homo sapiens polyhomeotic homolog 2 ... 38 0.044
AL513327-3|CAI13955.1| 323|Homo sapiens polyhomeotic homolog 2 ... 38 0.044
AJ419231-1|CAD11673.1| 858|Homo sapiens polyhomeotic 2 protein. 38 0.044
AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like prote... 38 0.044
BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein. 30 8.9
BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone recepto... 30 8.9
BC065519-1|AAH65519.1| 374|Homo sapiens THRAP3 protein protein. 30 8.9
BC054046-1|AAH54046.1| 373|Homo sapiens THRAP3 protein protein. 30 8.9
BC037554-1|AAH37554.1| 672|Homo sapiens THRAP3 protein protein. 30 8.9
BC019076-1|AAH19076.1| 373|Homo sapiens Unknown (protein for IM... 30 8.9
BC010997-1|AAH10997.1| 375|Homo sapiens THRAP3 protein protein. 30 8.9
BC002501-1|AAH02501.1| 375|Homo sapiens THRAP3 protein protein. 30 8.9
AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone recepto... 30 8.9
AL354661-2|CAH73240.1| 1839|Homo sapiens KIAA0368 protein. 30 8.9
AL159168-1|CAH73465.1| 1839|Homo sapiens KIAA0368 protein. 30 8.9
AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone recepto... 30 8.9
AB002366-1|BAA20823.1| 1441|Homo sapiens KIAA0368 protein. 30 8.9
>EF560717-1|ABQ59027.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 38.3 bits (85), Expect = 0.025
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 504 SAHISQAAAHDKGLPKAMVKPNILTHVIEGYVIPGG 611
S H S + +K P+A+VKP ILTHVIEG+VI G
Sbjct: 680 SMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEG 714
>BC131772-1|AAI31773.1| 983|Homo sapiens PHC3 protein protein.
Length = 983
Score = 38.3 bits (85), Expect = 0.025
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 504 SAHISQAAAHDKGLPKAMVKPNILTHVIEGYVIPGG 611
S H S + +K P+A+VKP ILTHVIEG+VI G
Sbjct: 680 SMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEG 714
>AJ320486-1|CAC86587.2| 983|Homo sapiens homolog of polyhomeotic 3
protein.
Length = 983
Score = 38.3 bits (85), Expect = 0.025
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 504 SAHISQAAAHDKGLPKAMVKPNILTHVIEGYVIPGG 611
S H S + +K P+A+VKP ILTHVIEG+VI G
Sbjct: 680 SMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEG 714
>AF444193-1|AAM51781.1| 983|Homo sapiens polyhomeotic 3 protein
protein.
Length = 983
Score = 38.3 bits (85), Expect = 0.025
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 504 SAHISQAAAHDKGLPKAMVKPNILTHVIEGYVIPGG 611
S H S + +K P+A+VKP ILTHVIEG+VI G
Sbjct: 680 SMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEG 714
>AF380154-1|AAM46139.1| 964|Homo sapiens early development
regulator 3 protein.
Length = 964
Score = 38.3 bits (85), Expect = 0.025
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 504 SAHISQAAAHDKGLPKAMVKPNILTHVIEGYVIPGG 611
S H S + +K P+A+VKP ILTHVIEG+VI G
Sbjct: 661 SMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEG 695
>U89278-1|AAC51170.1| 433|Homo sapiens polyhomeotic 2 homolog
protein.
Length = 433
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 138 PQAIVKPQILTHVIEGFVIQEG 159
>U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog
protein.
Length = 1004
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 534 DKGLPKAMVKPNILTHVIEGYVIPGG 611
D P+A+VKP ILTH+IEG+VI G
Sbjct: 721 DSKPPQAIVKPQILTHIIEGFVIQEG 746
>BX640639-1|CAE45787.1| 610|Homo sapiens hypothetical protein
protein.
Length = 610
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 534 DKGLPKAMVKPNILTHVIEGYVIPGG 611
D P+A+VKP ILTH+IEG+VI G
Sbjct: 327 DSKPPQAIVKPQILTHIIEGFVIQEG 352
>BC130630-1|AAI30631.1| 830|Homo sapiens PHC2 protein protein.
Length = 830
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 532 PQAIVKPQILTHVIEGFVIQEG 553
>BC110863-1|AAI10864.2| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 25 PQAIVKPQILTHVIEGFVIQEG 46
>BC092492-1|AAH92492.1| 405|Homo sapiens PHC2 protein protein.
Length = 405
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 107 PQAIVKPQILTHVIEGFVIQEG 128
>BC073964-1|AAH73964.1| 957|Homo sapiens PHC1 protein protein.
Length = 957
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 534 DKGLPKAMVKPNILTHVIEGYVIPGG 611
D P+A+VKP ILTH+IEG+VI G
Sbjct: 674 DSKPPQAIVKPQILTHIIEGFVIQEG 699
>BC068573-1|AAH68573.1| 405|Homo sapiens PHC2 protein protein.
Length = 405
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 107 PQAIVKPQILTHVIEGFVIQEG 128
>BC029269-1|AAH29269.1| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 25 PQAIVKPQILTHVIEGFVIQEG 46
>BC028396-1|AAH28396.3| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 25 PQAIVKPQILTHVIEGFVIQEG 46
>BC017748-1|AAH17748.1| 447|Homo sapiens PHC1 protein protein.
Length = 447
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 534 DKGLPKAMVKPNILTHVIEGYVIPGG 611
D P+A+VKP ILTH+IEG+VI G
Sbjct: 164 DSKPPQAIVKPQILTHIIEGFVIQEG 189
>BC002871-1|AAH02871.2| 481|Homo sapiens PHC1 protein protein.
Length = 481
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 534 DKGLPKAMVKPNILTHVIEGYVIPGG 611
D P+A+VKP ILTH+IEG+VI G
Sbjct: 198 DSKPPQAIVKPQILTHIIEGFVIQEG 223
>AL513327-5|CAI13957.1| 858|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 858
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 560 PQAIVKPQILTHVIEGFVIQEG 581
>AL513327-4|CAI13956.1| 464|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 464
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 166 PQAIVKPQILTHVIEGFVIQEG 187
>AL513327-3|CAI13955.1| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 25 PQAIVKPQILTHVIEGFVIQEG 46
>AJ419231-1|CAD11673.1| 858|Homo sapiens polyhomeotic 2 protein.
Length = 858
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 546 PKAMVKPNILTHVIEGYVIPGG 611
P+A+VKP ILTHVIEG+VI G
Sbjct: 560 PQAIVKPQILTHVIEGFVIQEG 581
>AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like protein
1 variant protein.
Length = 1099
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 534 DKGLPKAMVKPNILTHVIEGYVIPGG 611
D P+A+VKP ILTH+IEG+VI G
Sbjct: 816 DSKPPQAIVKPQILTHIIEGFVIQEG 841
>BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein.
Length = 955
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>BC065519-1|AAH65519.1| 374|Homo sapiens THRAP3 protein protein.
Length = 374
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>BC054046-1|AAH54046.1| 373|Homo sapiens THRAP3 protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>BC037554-1|AAH37554.1| 672|Homo sapiens THRAP3 protein protein.
Length = 672
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>BC019076-1|AAH19076.1| 373|Homo sapiens Unknown (protein for
IMAGE:3834482) protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>BC010997-1|AAH10997.1| 375|Homo sapiens THRAP3 protein protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>BC002501-1|AAH02501.1| 375|Homo sapiens THRAP3 protein protein.
Length = 375
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>AL354661-2|CAH73240.1| 1839|Homo sapiens KIAA0368 protein.
Length = 1839
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 345 DTLGDTEEGVESATETI-SFFDKIGSRLVAA 256
DTL D EE ++SATETI SF D L A
Sbjct: 776 DTLPDQEELIQSATETIGSFLDSTSPLLAIA 806
>AL159168-1|CAH73465.1| 1839|Homo sapiens KIAA0368 protein.
Length = 1839
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 345 DTLGDTEEGVESATETI-SFFDKIGSRLVAA 256
DTL D EE ++SATETI SF D L A
Sbjct: 776 DTLPDQEELIQSATETIGSFLDSTSPLLAIA 806
>AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP150
protein.
Length = 955
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 SRHRPPWWPTSRPKMINLNRLLHRRPCSRSLRNSRWSPSRQRMRPYPR 151
SR R + SR + +L+R RR SRS R+ +SP+ R R +PR
Sbjct: 20 SRSRSRSFSKSRSRSRSLSRSRKRRLSSRS-RSRSYSPAHNRERNHPR 66
>AB002366-1|BAA20823.1| 1441|Homo sapiens KIAA0368 protein.
Length = 1441
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 345 DTLGDTEEGVESATETI-SFFDKIGSRLVAA 256
DTL D EE ++SATETI SF D L A
Sbjct: 378 DTLPDQEELIQSATETIGSFLDSTSPLLAIA 408
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,568,913
Number of Sequences: 237096
Number of extensions: 2092054
Number of successful extensions: 5124
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5117
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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