Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060651.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   1.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   4.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.2  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 401 GSGR*WCDVPRSATRATPXRLCCCFQIVTFCSE 499
           GS    CD+     RA P     C     FCSE
Sbjct: 145 GSDENTCDIDNDPNRAPPCDPAVCVLPDCFCSE 177


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 422 DVPRSATRATPXRLCCCFQIVTFCSEIK 505
           D+P +A +A+    CCC +    CS  K
Sbjct: 176 DLPAAAGKASNGNKCCCLRT---CSSAK 200


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 663 TSTRGQGPAEVXRYCALSELRSGL 592
           T  R +GP  V  YC+  +L++ L
Sbjct: 521 TEGRAEGPLLVVEYCSRGDLQTYL 544


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 162  FVIVS*IFGGA*CYFFGVFYWTVTSHCTTA*MRISERALV 43
            FV +  + G    YF G+  + ++ HC      I  R +V
Sbjct: 1232 FVTIHNVIGQFLGYFIGLITFVMSQHCVELVSMIKARFVV 1271


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 525 LTTLKLHFISEQKVTIWKQ 469
           +T   +HF+S  K  +WK+
Sbjct: 80  MTKKVIHFLSHNKQQMWKE 98


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 283 PRGHGAVRPCPG 248
           P+G GAV+P PG
Sbjct: 37  PQGGGAVQPDPG 48


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 63  YAFKPSYSVTSQSSRRLQR 119
           Y F P Y +  + +RRL R
Sbjct: 232 YVFNPRYYLEKKVTRRLHR 250


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 63  YAFKPSYSVTSQSSRRLQR 119
           Y F P Y +  + +RRL R
Sbjct: 232 YVFNPRYYLEKKVTRRLHR 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,596
Number of Sequences: 336
Number of extensions: 2464
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)