Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060650.seq
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein. 71 3e-12
BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation ... 71 3e-12
BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1... 71 3e-12
AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5 p... 71 3e-12
AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein ... 71 3e-12
AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein. 71 4e-12
DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein ... 71 5e-12
AF277183-1|AAK07542.1| 206|Homo sapiens PNAS-125 protein. 34 0.55
AL136233-1|CAI17232.1| 196|Homo sapiens RUN and FYVE domain con... 32 1.7
AF461266-1|AAL67520.1| 606|Homo sapiens RUFY2 protein. 32 1.7
AF411980-1|AAL04164.1| 590|Homo sapiens Run- and FYVE-domain co... 32 1.7
AB040970-1|BAA96061.1| 619|Homo sapiens KIAA1537 protein protein. 32 1.7
BC022381-1|AAH22381.1| 157|Homo sapiens hypothetical protein FL... 31 3.8
AK056221-1|BAB71123.1| 157|Homo sapiens protein ( Homo sapiens ... 31 3.8
>CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein.
Length = 374
Score = 71.3 bits (167), Expect = 3e-12
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +2
Query: 71 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 250
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 251 DTKPF*TVLSLLWFLYH*KEE 313
+V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 54.0 bits (124), Expect = 5e-07
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 QLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGTYTDENASYAREDA 683
Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+YT++NAS AR DA
Sbjct: 146 QVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDA 204
Score = 53.2 bits (122), Expect = 8e-07
Identities = 28/100 (28%), Positives = 59/100 (59%)
Frame = +1
Query: 256 EAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLR 435
E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P+R
Sbjct: 61 ESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVR 120
Query: 436 YHVYYHVIELAARVGFVREVFTGVGSLGKSLLTAHLLMNK 555
Y VY +I++AA G ++ + T + + K + +L K
Sbjct: 121 YTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEK 160
>BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation
initiation factor 3, subunit M protein.
Length = 374
Score = 71.3 bits (167), Expect = 3e-12
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +2
Query: 71 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 250
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 251 DTKPF*TVLSLLWFLYH*KEE 313
+V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 54.0 bits (124), Expect = 5e-07
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 QLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGTYTDENASYAREDA 683
Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+YT++NAS AR DA
Sbjct: 146 QVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDA 204
Score = 53.2 bits (122), Expect = 8e-07
Identities = 28/100 (28%), Positives = 59/100 (59%)
Frame = +1
Query: 256 EAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLR 435
E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P+R
Sbjct: 61 ESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVR 120
Query: 436 YHVYYHVIELAARVGFVREVFTGVGSLGKSLLTAHLLMNK 555
Y VY +I++AA G ++ + T + + K + +L K
Sbjct: 121 YTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEK 160
>BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1
(herpesvirus entry mediator) protein.
Length = 374
Score = 71.3 bits (167), Expect = 3e-12
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +2
Query: 71 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 250
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 251 DTKPF*TVLSLLWFLYH*KEE 313
+V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 54.0 bits (124), Expect = 5e-07
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 QLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGTYTDENASYAREDA 683
Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+YT++NAS AR DA
Sbjct: 146 QVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDA 204
Score = 53.2 bits (122), Expect = 8e-07
Identities = 28/100 (28%), Positives = 59/100 (59%)
Frame = +1
Query: 256 EAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLR 435
E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P+R
Sbjct: 61 ESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVR 120
Query: 436 YHVYYHVIELAARVGFVREVFTGVGSLGKSLLTAHLLMNK 555
Y VY +I++AA G ++ + T + + K + +L K
Sbjct: 121 YTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEK 160
>AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5
protein.
Length = 374
Score = 71.3 bits (167), Expect = 3e-12
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +2
Query: 71 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 250
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 251 DTKPF*TVLSLLWFLYH*KEE 313
+V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 54.0 bits (124), Expect = 5e-07
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 QLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGTYTDENASYAREDA 683
Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+YT++NAS AR DA
Sbjct: 146 QVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDA 204
Score = 53.2 bits (122), Expect = 8e-07
Identities = 28/100 (28%), Positives = 59/100 (59%)
Frame = +1
Query: 256 EAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLR 435
E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P+R
Sbjct: 61 ESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVR 120
Query: 436 YHVYYHVIELAARVGFVREVFTGVGSLGKSLLTAHLLMNK 555
Y VY +I++AA G ++ + T + + K + +L K
Sbjct: 121 YTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEK 160
>AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein
variant protein.
Length = 374
Score = 71.3 bits (167), Expect = 3e-12
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +2
Query: 71 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 250
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 251 DTKPF*TVLSLLWFLYH*KEE 313
+V+SLL L K+E
Sbjct: 60 VESVMNSVVSLLLILEPDKQE 80
Score = 54.0 bits (124), Expect = 5e-07
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 QLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGTYTDENASYAREDA 683
Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+YT++NAS AR DA
Sbjct: 146 QVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDA 204
Score = 53.2 bits (122), Expect = 8e-07
Identities = 28/100 (28%), Positives = 59/100 (59%)
Frame = +1
Query: 256 EAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLR 435
E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P+R
Sbjct: 61 ESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVR 120
Query: 436 YHVYYHVIELAARVGFVREVFTGVGSLGKSLLTAHLLMNK 555
Y VY +I++AA G ++ + T + + K + +L K
Sbjct: 121 YTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEK 160
>AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein.
Length = 374
Score = 70.9 bits (166), Expect = 4e-12
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +2
Query: 71 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 250
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59
Query: 251 DTKPF*TVLSLLWFLYH*KEE 313
+V+SLL L K+E
Sbjct: 60 VESVVNSVVSLLLILEPDKQE 80
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 QLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGTYTDENASYAREDA 683
Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+YT++NAS AR DA
Sbjct: 146 QVRKWISDWNLTTEKKHTLLRLLYEALADCKKSDAASKVMVELLGSYTEDNASQARVDA 204
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/100 (28%), Positives = 58/100 (58%)
Frame = +1
Query: 256 EAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLR 435
E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P+R
Sbjct: 61 ESVVNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVR 120
Query: 436 YHVYYHVIELAARVGFVREVFTGVGSLGKSLLTAHLLMNK 555
Y VY +IE+ A G ++ + T + + K + +L K
Sbjct: 121 YTVYCSLIEVVASCGAIQYIPTELDQVRKWISDWNLTTEK 160
>DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein
GA17 protein.
Length = 136
Score = 70.5 bits (165), Expect = 5e-12
Identities = 38/75 (50%), Positives = 46/75 (61%)
Frame = +2
Query: 89 FMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDTKPF* 268
F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 3 FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKDVESVMN 62
Query: 269 TVLSLLWFLYH*KEE 313
+V+SLL L K+E
Sbjct: 63 SVVSLLLILEPDKQE 77
>AF277183-1|AAK07542.1| 206|Homo sapiens PNAS-125 protein.
Length = 206
Score = 33.9 bits (74), Expect = 0.55
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 624 MIELLGTYTDENASYAREDA 683
M+ELLG+YT++NAS AR DA
Sbjct: 1 MVELLGSYTEDNASQARVDA 20
>AL136233-1|CAI17232.1| 196|Homo sapiens RUN and FYVE domain
containing 2 protein.
Length = 196
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 513 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 632
L+KEF N N+Q++K+Y Q L++ ++L+ +K+ IE
Sbjct: 73 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 113
>AF461266-1|AAL67520.1| 606|Homo sapiens RUFY2 protein.
Length = 606
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 513 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 632
L+KEF N N+Q++K+Y Q L++ ++L+ +K+ IE
Sbjct: 483 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 523
>AF411980-1|AAL04164.1| 590|Homo sapiens Run- and FYVE-domain
containing protein Rabip4R protein.
Length = 590
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 513 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 632
L+KEF N N+Q++K+Y Q L++ ++L+ +K+ IE
Sbjct: 467 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 507
>AB040970-1|BAA96061.1| 619|Homo sapiens KIAA1537 protein protein.
Length = 619
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 513 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 632
L+KEF N N+Q++K+Y Q L++ ++L+ +K+ IE
Sbjct: 496 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 536
>BC022381-1|AAH22381.1| 157|Homo sapiens hypothetical protein
FLJ31659 protein.
Length = 157
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 465 GCTSWICQGSLHWSWQLRKEFANCPPS 545
G T+++ Q SLH SW+ R F+ CP S
Sbjct: 64 GTTTFVQQRSLHQSWEKRIVFSACPVS 90
>AK056221-1|BAB71123.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ31659 fis, clone NT2RI2004398. ).
Length = 157
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 465 GCTSWICQGSLHWSWQLRKEFANCPPS 545
G T+++ Q SLH SW+ R F+ CP S
Sbjct: 64 GTTTFVQQRSLHQSWEKRIVFSACPVS 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,963,649
Number of Sequences: 237096
Number of extensions: 1847317
Number of successful extensions: 4223
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4223
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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