Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060650.seq
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118924-1|AAM50784.1|  387|Drosophila melanogaster LD23767p pro...   120   2e-27
AE013599-1830|AAF58289.1|  387|Drosophila melanogaster CG8309-PA...   120   2e-27
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    29   4.5  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    29   4.5  

>AY118924-1|AAM50784.1|  387|Drosophila melanogaster LD23767p
           protein.
          Length = 387

 Score =  120 bits (288), Expect = 2e-27
 Identities = 55/96 (57%), Positives = 74/96 (77%)
 Frame = +1

Query: 229 FQRAE*IGYEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYN 408
           F+  E    + ILNSIVSIM++IPL+RGEN++LA+ +++TKAP   LG V LQSLWRL+N
Sbjct: 54  FKDGEPSQIDGILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFN 113

Query: 409 NLEPNSPLRYHVYYHVIELAARVGFVREVFTGVGSL 516
           NL+  SPLRYHVYYH++++A +   V EVF+GV  L
Sbjct: 114 NLDTASPLRYHVYYHLVQVAKQCEQVLEVFSGVDQL 149



 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 44/59 (74%), Positives = 51/59 (86%)
 Frame = +3

Query: 510 QLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAI 686
           QL+ +FANCPPS+EQMQKLYRLLH V KD N EL++KVMIELLGTYT +NA  AREDA+
Sbjct: 148 QLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIELLGTYTADNACVAREDAM 206



 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
 Frame = +2

Query: 71  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFK--EPS 244
           M    VF+D+SL++Q  ELR+YFK LGAEIS EKS KG+EDDLHKI+GVCD CFK  EPS
Sbjct: 1   MTSHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPS 60

Query: 245 ESD 253
           + D
Sbjct: 61  QID 63


>AE013599-1830|AAF58289.1|  387|Drosophila melanogaster CG8309-PA
           protein.
          Length = 387

 Score =  120 bits (288), Expect = 2e-27
 Identities = 55/96 (57%), Positives = 74/96 (77%)
 Frame = +1

Query: 229 FQRAE*IGYEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYN 408
           F+  E    + ILNSIVSIM++IPL+RGEN++LA+ +++TKAP   LG V LQSLWRL+N
Sbjct: 54  FKDGEPSQIDGILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFN 113

Query: 409 NLEPNSPLRYHVYYHVIELAARVGFVREVFTGVGSL 516
           NL+  SPLRYHVYYH++++A +   V EVF+GV  L
Sbjct: 114 NLDTASPLRYHVYYHLVQVAKQCEQVLEVFSGVDQL 149



 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 44/59 (74%), Positives = 51/59 (86%)
 Frame = +3

Query: 510 QLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAI 686
           QL+ +FANCPPS+EQMQKLYRLLH V KD N EL++KVMIELLGTYT +NA  AREDA+
Sbjct: 148 QLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIELLGTYTADNACVAREDAM 206



 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
 Frame = +2

Query: 71  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFK--EPS 244
           M    VF+D+SL++Q  ELR+YFK LGAEIS EKS KG+EDDLHKI+GVCD CFK  EPS
Sbjct: 1   MTSHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPS 60

Query: 245 ESD 253
           + D
Sbjct: 61  QID 63


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 116  ALELRRYFKSLGAEISEEKSPKGIED 193
            ++ LRR+++ L  E+S+ K P+G+ED
Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 116  ALELRRYFKSLGAEISEEKSPKGIED 193
            ++ LRR+++ L  E+S+ K P+G+ED
Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,024,174
Number of Sequences: 53049
Number of extensions: 550073
Number of successful extensions: 1616
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)