Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060649.seq
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 91 6e-19
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 58 7e-09
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 55 6e-08
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 54 8e-08
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 51 8e-07
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 46 2e-05
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 45 7e-05
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 45 7e-05
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 44 9e-05
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 44 2e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 44 2e-04
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 43 3e-04
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 43 3e-04
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 42 5e-04
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 42 6e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 41 8e-04
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 40 0.002
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 40 0.002
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 39 0.003
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 39 0.003
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 39 0.004
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 37 0.013
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 37 0.013
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 36 0.031
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 35 0.054
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 35 0.054
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 35 0.071
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 34 0.094
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 34 0.12
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 34 0.12
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.29
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 33 0.29
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.29
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 32 0.50
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 31 0.66
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 28 6.2
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 28 6.2
SB_44083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07) 28 8.1
SB_8562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TT+ LK+++ QWG IVD V+MK + RS+GFGF+TY + V+E + H +D R +
Sbjct: 61 TTEEGLKDYFSQWGTIVDCVIMK--RDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREI 118
Query: 435 EPKRAVPREEIKRPEASATVKKLFV 509
EPKR+VPR+E PEA + +K+FV
Sbjct: 119 EPKRSVPRDESGAPEAMSKTRKIFV 143
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFST------FGNIVSVSVVTDKETGKK-RGLGFVEFDGYDX 655
K+ GL EED++EYF++ G ++ V + D++ K+ RG FV FD +
Sbjct: 140 KIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEI 199
Query: 656 VDRVC 670
V++VC
Sbjct: 200 VEKVC 204
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Frame = +3
Query: 255 TTDSSLKEFYEQ------WGEIVDVVVMKD-PKTKRSKGFGFITYSQAHMVDEAQNNRPH 413
T + +KE++ GE++DV + +D KR +GF F+T+ +V++ + H
Sbjct: 150 TVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYH 209
Query: 414 KIDGRIVEPKRAVPREEIKRPE 479
+I + E K+A P+ +++ +
Sbjct: 210 EIRMKQCEVKKAEPQSAMRKKD 231
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ----AHMVDEAQNNRPHKID 422
TT+ +L+E++E +GE+ DVVV+ D TK+S+GFG++T++ +++ + N H+ID
Sbjct: 25 TTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRID 84
Query: 423 GRIVEPKRAVPREEIKRPEASATVKKLFV 509
G+ VE KRA+PR++ T KK+FV
Sbjct: 85 GKEVEVKRAIPRDDNSATSHEKT-KKIFV 112
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = +2
Query: 491 R*KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVC 670
R K+ GL ++ E LREYF +G + V V+ D T K RG G+V F Y V
Sbjct: 13 RAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVL 72
Query: 671 LQQI 682
++
Sbjct: 73 KDKV 76
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +3
Query: 267 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 446
+++ E+ + VD+++ K+ +TK +GF F+ + DE + + G++VE K+
Sbjct: 127 AIESLLEEKVDKVDLIMKKEDETKH-RGFAFVELNNEDQADELCCVKKIHVKGKMVEAKK 185
Query: 447 AVPRE 461
A PR+
Sbjct: 186 ATPRD 190
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDGR 428
TT+S +KE++ ++GEI V DP T+RS+GFGF+ + + ++A+N + H+I GR
Sbjct: 126 TTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD---EDAKNVLSTSHRIQGR 182
Query: 429 IVEPKRAVPREEIKRPEASATVKKLFV 509
+ E + P+EE+ P KKLFV
Sbjct: 183 LCEVRLPRPKEELNVP------KKLFV 203
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
++ GL E +++EYF+ FG I V D T + RG GFV F
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRF 163
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNN 404
TT+ +L E++ Q+GE+ DV + PK R FGF+T+ S A+ V A N
Sbjct: 210 TTEKTLMEYFAQFGEVTDVYI---PKPFRH--FGFVTFASVANCVSIAFEN 255
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 428
L++ +E++GE+ + VVM+DP TKRS+GFGF+T+ VD N+ ++DG+
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Score = 34.7 bits (76), Expect = 0.071
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 536 EDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRV 667
E LR++F FG + V+ D T + RG GF+ F VD V
Sbjct: 122 EGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVV 165
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNI 574
K+ GL + EED+++YFS FG +
Sbjct: 184 KIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 428
D +L++F+ Q+GEI + VV+KD TK+SKG+GF+T + + + A N+ I+GR
Sbjct: 23 DDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEGR 78
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
K+ G+ + ++ LR++F+ FG I V+ D+ T K +G GFV D + C
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKN 70
Query: 677 QIP 685
+ P
Sbjct: 71 KRP 73
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +2
Query: 488 HR*KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXV 658
H+ V L DIEEE LRE F+T GN+ SV ++ D++TG +G G+V F+ D V
Sbjct: 54 HQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAV 110
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE- 437
+ L+E + G + V +++D KT KGFG++ + V A + GR +
Sbjct: 69 EEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRV 128
Query: 438 -PKRAVPREE 464
P + P+ E
Sbjct: 129 FPSKDKPQTE 138
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFS-TFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCL 673
K+ GLK + +E +REYF + + + +T+ + ++RG FV FD D VD++C
Sbjct: 104 KIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICE 163
Query: 674 QQ 679
Q
Sbjct: 164 TQ 165
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRV 667
K+ GL + +E L+EYFS +G +V V + D TG+ RG FV+F D +
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAI 86
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 255 TTDSSLKEFY-EQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRI 431
T+D ++E++ + + + ++ + + + R +GF F+++ VD+ + H I+G
Sbjct: 114 TSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNK 173
Query: 432 VEPKRAVPRE 461
VE KRA+P+E
Sbjct: 174 VEVKRALPKE 183
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/85 (32%), Positives = 43/85 (50%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TT SLKE++ ++GE+V V + D T R +GF F+ + H+ + +
Sbjct: 40 TTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFK-------------HQSEADAI 86
Query: 435 EPKRAVPREEIKRPEASATVKKLFV 509
+PK A P I +P VKK+FV
Sbjct: 87 DPKPAAP---IGKP-PHLRVKKIFV 107
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGRIVE 437
D +KE + G+IV + VM DP+ K SKGFGF+++ +EA N K I GR +
Sbjct: 122 DEQMKEICAEAGKIVSLKVMTDPEGK-SKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLW 180
Query: 438 PKRAVPREEIKRPEASATVKK 500
RA R E + E A ++K
Sbjct: 181 AGRAKKRAE-RAAEVKAEIEK 200
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 524 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
D+++E ++E + G IVS+ V+TD E GK +G GFV F+
Sbjct: 119 DMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFE 157
Score = 35.1 bits (77), Expect = 0.054
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 440
D L+E + +G I VMKD K SKGFGF+ +S +A +++GRI+
Sbjct: 225 DERLREEFSPYGTISSAKVMKDDKGN-SKGFGFVCFSSPEEATKAVT----EMNGRILIS 279
Query: 441 K 443
K
Sbjct: 280 K 280
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 330 KTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATV 494
+ + KGFGF+T+ ++ +PH +DG+ ++PK AVPR ++ + A +
Sbjct: 137 RARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVM 191
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKK 616
KV GL EEDL+EYFST+G +V V +E G++
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYG-MVEVKKAEYRERGQQ 241
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +3
Query: 312 VVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPRE 461
++M D T+R +GFGF+T+ + D+A + + H I+ + VE K+A P+E
Sbjct: 1 MLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPKE 50
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRV 667
L +D +E D+ YF +G + V ++TD+ETGK +G G V+ V+++
Sbjct: 326 LSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKI 376
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
V GL +EE L++YF FG + SV ++ G R GFV F
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLF 127
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
T + LK+++EQ+GE+ V +M+ S+ +GF+ + E + H I+G+ V
Sbjct: 91 TDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFKDDGPSKEVL-KKSHVINGKTV 148
Query: 435 E 437
+
Sbjct: 149 D 149
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
V + + EE L+E FS G ++S +V D+ETGK +G GF E+
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEY 73
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIV 434
++ LKE + + G ++ ++ D +T + KG+GF Y Q + +N ++++GR +
Sbjct: 37 SEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRAL 96
Query: 435 EPKRAVP---REEIKRPEASA 488
A +EEIK E +A
Sbjct: 97 RVDSAASEKNKEEIKSMEMTA 117
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 512 GLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
GL ++++E+ L F FG+I V + D T K RG GFVEF+
Sbjct: 11 GLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 291 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVP 455
+G+I DV + D T + +GFGF+ + A A N ++ GR + A P
Sbjct: 28 FGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNESELFGRTIRVNLAKP 83
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
++ A + D+ E+D++ F FG +V S+ + TGK +G GF+E++
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYE 248
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+ +K +E +G++V + K+P T + KG+GFI Y ++A
Sbjct: 212 EDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDA 256
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/69 (28%), Positives = 41/69 (59%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TT+S L+ F+E++G + + +++D K SKG+ FIT+ + D ++N+ +++
Sbjct: 19 TTESELRAFFEEYGVVKESKIVRD-KHGVSKGYAFITFESQEVADGLRDNKGLDFKDKVL 77
Query: 435 EPKRAVPRE 461
+AV R+
Sbjct: 78 SIGQAVRRK 86
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
V C L ++I DL E+FS G + V +++D+ + + +G+ ++EF
Sbjct: 148 VFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEF 194
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
T++ +K +E +G + V ++ D +T RSKG+GF+ + +A A
Sbjct: 254 TEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
++ L +I E ++ F FG + SV ++ D ET + +G GFV+F
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQF 290
Score = 34.3 bits (75), Expect = 0.094
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 386
L+EF+ + G++ DV ++ D ++RSKG +I ++ V
Sbjct: 162 LEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 200
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 527 IEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
+ +ED+++ F T GN+ S ++ D+ TG+ G FV +D D ++
Sbjct: 38 MSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANK 83
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 509 AGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+GL +D++EE++ F FG I++ V+ D +G+ RG GFV FD
Sbjct: 118 SGLPKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFD 161
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +2
Query: 521 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
+D +EDLR F +FG+I V +V D +T + +G G+V+F
Sbjct: 62 KDFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 440
D L+ +E +G+I V +++D KT+ +KG+G++ + ++ A N + EP
Sbjct: 66 DEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALENCDKSLKAVWAEP 125
Query: 441 K 443
K
Sbjct: 126 K 126
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
L ++E+ L E F ++V V V+TD+ETG+ RG GFV F + +++
Sbjct: 12 LSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEK 60
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 EIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREE 464
++VDV V+ D +T R +GFGF+T+ +++A + DGR ++ +A PR E
Sbjct: 29 DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRGE 85
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 264 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR--IVE 437
SSL+ + +G I D+ +++ +T +SKGFG++TY A A H IDG+ I E
Sbjct: 77 SSLESVFGPYGAIEDLSIIRT-QTGKSKGFGYVTYENAESAQRALAG-THIIDGKWVIAE 134
Query: 438 PK 443
PK
Sbjct: 135 PK 136
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 518 KQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
+ DI + L F +G I +S++ +TGK +G G+V ++ + R
Sbjct: 71 RPDIRKSSLESVFGPYGAIEDLSIIRT-QTGKSKGFGYVTYENAESAQR 118
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIVE 437
++ L++ + ++ ++VDV V+ D +T+R +GF F+T+ S+ +M D + DGR ++
Sbjct: 243 EADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMK 301
Query: 438 PKRAVPREE 464
+A RE+
Sbjct: 302 VNQARSREQ 310
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +2
Query: 572 IVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
++SV V+TD+ETG+ RG GFV F D +D+
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDK 65
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREE 464
++ V V+ D +T R +GFGF+T+ +D+A + +DGR ++ +A PR E
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGE 90
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 503 VCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
VC + + + E + R+ F +GNIV+ ++ DK TG +G GFV +D
Sbjct: 137 VC-NIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYD 182
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+ QD+ ++ R F ++ + +V K +G G GFV+++
Sbjct: 54 IPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYN 96
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L ++E+ L E F N+V V V+TD+ETG+ RG GFV +
Sbjct: 89 LSYSVDEQALEEKFHDC-NVVDVRVITDRETGRPRGFGFVTLE 130
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFIT 365
+VDV V+ D +T R +GFGF+T
Sbjct: 107 VVDVRVITDRETGRPRGFGFVT 128
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L Q+ + DL + F FG ++S V DK+T + GFV +D
Sbjct: 284 LPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYD 326
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
TD+ L + ++ +G ++ V D +T SK FGF++Y V AQN H ++G +
Sbjct: 289 TDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDN---VMSAQNAIQH-MNGFQIG 344
Query: 438 PKRAVPREEIKRPE 479
KR + ++KRP+
Sbjct: 345 AKRL--KVQLKRPK 356
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
++ C L ++ +E L F+ + + + +V DK++ K +G GFV F
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSF 265
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
TD SL + ++ + +++D K+ +SKG+GF+++
Sbjct: 229 TDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSF 265
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
V L + DL + F +G +V V+++ DKET + RG+ F+ F
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILF 58
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
+EDL FS FG I+S V+ D++TG+ F+EF+ + +R
Sbjct: 133 DEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCER 176
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 512 GLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
GLK + ++DL +G I+S + DK+T +G GFV+F+
Sbjct: 106 GLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFE 149
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 231 FYRWTRL*TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
+ R + TTD L ++G I+ + D T KG+GF+ +
Sbjct: 103 YIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDF 148
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGE-----IVDVVVMKDPKTKRSKGFGFITYSQ-AHMVDEAQNN-RPH 413
TT+ +++ +++ + E + V + K P+ K S+ F F+ +S + ++D N H
Sbjct: 19 TTEETVRAYFKSFCEGSEADVSSVSLAKTPEGK-SRKFCFVEFSNGSDIIDNIVFNFESH 77
Query: 414 KIDGRIVEPKRAVPREEIKRPEASATVKKLFV 509
ID + VE KRA+PR++ A KKLF+
Sbjct: 78 SIDNKQVEVKRAMPRDD-PNELAHVRTKKLFI 108
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNI--VSVSVVTDKETGKKRGLGFVEFDGYDXVDRVC 670
K+ GLK + EED++ + + + +V D+ET K +G FV F VD++
Sbjct: 105 KLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLY 164
Query: 671 L 673
L
Sbjct: 165 L 165
Score = 35.1 bits (77), Expect = 0.054
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +3
Query: 303 VDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 449
+++ +++D +T + KG+ F+ + H+VD+ R ++ G+ VE K+A
Sbjct: 133 LEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 512 GLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVD 661
GL +D+ E L E F+ FG + V ++ D E+GK R GFV F D +
Sbjct: 530 GLSEDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHFWSSDVAE 578
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 401
TT LK+ ++++G++ D+ + +D T S+GF F+ + + ++A +
Sbjct: 27 TTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMD 75
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 440
+ L +E+ G I D +M DP + +KGF F T+S DEAQ N K+D + + P
Sbjct: 165 EDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNK---DEAQ-NAVKKLDNKEIRP 220
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 318 MKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAV 452
+KD K+ RSK +GF+ + ++A N+PH I+G+ P V
Sbjct: 94 VKDLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQKSGPSSPV 138
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ A L +++ ++ ++E FS +G + +V + TD+ RG +VE+
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEY 1205
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXV 658
K+ L + +E ++ + F FG + V ++ DKE+G+ RG GFV D +
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQI 62
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVE 437
+ +++ +E++G + V +++D ++ RS+GFGF+ A + A + + GR +
Sbjct: 22 EGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNIT 80
Query: 438 PKRAVPREE 464
A+ + E
Sbjct: 81 VALALDKTE 89
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGY 649
+ ++ +E+D+ E FS +G I ++ V D+ TG +G VE++ +
Sbjct: 300 IHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETF 344
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +2
Query: 443 TSSSKGRD*KTRS*CHR*KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRG 622
TSS+ GR R +VC+ + ED+R F +G I V VV DK T + RG
Sbjct: 9 TSSNSGRIDVDNPPFSRVFIVCS---KRHNAEDIRSAFEQYGTIEDVWVVKDKATKENRG 65
Query: 623 LGFVEF 640
+ +V+F
Sbjct: 66 VCYVKF 71
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQA 377
++ +EQ+G I DV V+KD TK ++G ++ + +A
Sbjct: 39 IRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKA 74
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDG 425
+S + E + GEI V + ++ KTK KG +T++ E R H I G
Sbjct: 134 ESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIHG 188
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
T +S++ E++ GE V+ V + +SKGF F+ + V+ H ID V
Sbjct: 53 TVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLGRDDHVIDNSDV 112
Query: 435 EPKR 446
++
Sbjct: 113 SMEK 116
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
KV+ + I E + E+FS+ G I SV + + +T +++G V F
Sbjct: 122 KVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTF 169
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 35.1 bits (77), Expect = 0.054
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 578 SVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
+V+++TD+ETG+ RG GFV F + +++
Sbjct: 124 AVNIITDRETGRPRGFGFVTFGSKEEMEK 152
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 309 VVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPR 458
V ++ D +T R +GFGF+T+ +++A + +DGR ++ A PR
Sbjct: 125 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPR 175
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 34.7 bits (76), Expect = 0.071
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 398
T +S L+E + G I + + KD T +SKGF FI + H D A+
Sbjct: 192 TRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF--VHREDAAR 237
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 34.7 bits (76), Expect = 0.071
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 291 WGEIVDVVVMKDPKTKRSKGFGFITY-SQAHMVDEAQNNRPHKIDGRIV 434
+GEIV+V +++D KT + KGF F+ Y Q + N K+ GR +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTI 50
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/27 (44%), Positives = 22/27 (81%)
Frame = +2
Query: 563 FGNIVSVSVVTDKETGKKRGLGFVEFD 643
+G IV+V++V DK+TGK++G F+ ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYE 28
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 34.3 bits (75), Expect = 0.094
Identities = 11/37 (29%), Positives = 26/37 (70%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS 371
++ +K+F+EQ+G + + + + K+ RSKG+ F+ ++
Sbjct: 111 ENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFA 147
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
E +++++F FG + + + K++ + +G FVEF
Sbjct: 111 ENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF 146
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 428
TT LKE +E++GE++DV + K P + + F+ +++ +A+ + GR
Sbjct: 260 TTYGDLKEAFERYGEVIDVDIKKQP---GNNPYAFVQFAELSSAIQARRKMDREYVGR 314
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 542 LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRV 667
L++ FS FG ++ VS+ K G+ +G F+EF+ + V
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHV 145
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 542 LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L + F FG ++S V DK+T + GFV +D
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYD 311
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLG 628
L Q+ + DL + F FG ++S V DK+T + G
Sbjct: 236 LPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFG 273
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 500 VVCAGLKQDIEEED-LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
++ GL+ +I E+D L+E ++ V +V +K G RG GFVEFD
Sbjct: 333 IMLHGLRDEISEDDVLQELYAAEVAFRDVRIVRNK-IGYTRGFGFVEFD 380
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFI---TYSQAHMVDE--AQNNRPHKIDGRIVEPKRAVPREE 464
I D+ ++KD T S+GF F+ T +A + E A N P IDGR++ A E
Sbjct: 436 IYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELIAAMNPPFMIDGRVITTLYARKSEP 495
Query: 465 IKRPEASAT 491
P +T
Sbjct: 496 SPVPTTKST 504
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
+KE + Q G + V +P S+GF F+ Y+ A ++ Q R H +GR VE
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQ--RAH--NGRQVE 273
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 524 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
+ E + S +GNI + +V + TG +G GFVE+
Sbjct: 123 EFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEY 161
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 542 LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
++E FS GN+ V + G RG FV++
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDY 254
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ----NNRPHKIDG 425
T++ + +G I + +++ T SKG+GF+ Y+ +A+ N I G
Sbjct: 125 TETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQLLNTASKYIGG 184
Query: 426 RIV 434
RI+
Sbjct: 185 RIL 187
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 557 STFGNIVSVSVVTDKETGKKRGLGFVEF 640
S G + +V + TDK TG++R GFVEF
Sbjct: 478 SNAGPLENVRIPTDKNTGQQRSFGFVEF 505
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 557 STFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRV 667
+ F + V+ D+E+G+ RG GFV++D + +V
Sbjct: 307 AAFEGCSNAKVIFDRESGESRGFGFVDYDDVETAKKV 343
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 315 VMKDPKTKRSKGFGFITYSQAHMVDEAQNNRP-HKIDGRIVEPKRAVPREE 464
V+ D ++ S+GFGF+ Y + + ++DGR V A PR E
Sbjct: 317 VIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPRTE 367
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 291 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 404
+GEIV+V +++D KT + KGF F+ Y A +N
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDN 39
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/27 (44%), Positives = 22/27 (81%)
Frame = +2
Query: 563 FGNIVSVSVVTDKETGKKRGLGFVEFD 643
+G IV+V++V DK+TGK++G F+ ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYE 28
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF-DGYDXVDRV 667
+V L QD+ E+DL + F +G+I V + + G FVEF D D D V
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP--FAFVEFEDPRDAEDAV 317
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVV--MKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGR 428
T++ LKE + +GE+ + V K + R GFGF+ ++ +A + KI GR
Sbjct: 259 TEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKILGR 318
Query: 429 IVEPKRAVPR 458
V AVP+
Sbjct: 319 PVAVDWAVPK 328
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
+T ++ ++Q+G+I V+ D T+ SKG F+ Y A V + +G +
Sbjct: 427 STQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAATDEDSEGLFL 486
Query: 435 EPKR 446
+ R
Sbjct: 487 DGNR 490
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDK--ETGKKRGLGFVEF 640
+++ L + E L+E FS FG + SV K +K G GFV+F
Sbjct: 248 RLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQF 297
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTK-RSKGFGFITYSQAHMVDEAQNN 404
TD+ K +E+ G + ++KD + R +GFG++T++ +A++N
Sbjct: 32 TDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEEDALKAKDN 81
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 446 SSSKGRD*KTRS*CHR*KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGL 625
++ KGR + R H + L + E L + FS FG++ VV D G+ +G
Sbjct: 110 ATRKGRTLRVRFATHAAALRVKNLDNLVTNELLEQAFSQFGDVERAVVVCDVR-GRSKGH 168
Query: 626 GFVEF 640
G VEF
Sbjct: 169 GIVEF 173
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 362
+ +KE ++++GE+ +V + K+ KGFGFI
Sbjct: 65 EEEMKEMFKKYGEVAEVFINKE------KGFGFI 92
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGY-DXVDRV 667
L +D+ E D+ ++ +G I +S+ KRG GFVEFD + D D V
Sbjct: 696 LPRDVRESDVEKFLRGYGKIRDISL--------KRGYGFVEFDDHRDAEDAV 739
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 530 EEEDLREYFSTFGNIVSVSVVTDKETGKKR 619
EE+DLR F +G I ++++ DK TG+ +
Sbjct: 182 EEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKK 616
K+ + + +EEDLR FS FG I ++V+ + ++ K
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSK 254
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVD 661
+V L +D E DL ++ +G + +S+ K G GFVEFD Y D
Sbjct: 6 RVYFGRLPRDCRERDLEKFVRGYGRVREISM--------KLGYGFVEFDDYRDAD 52
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRG 622
E +L +FS FG + V +V D+ TG +G
Sbjct: 1079 ELELETFFSNFGPVADVRIVCDRRTGLNKG 1108
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKG 350
TT+ L+ F+ +G + DV ++ D +T +KG
Sbjct: 1077 TTELELETFFSNFGPVADVRIVCDRRTGLNKG 1108
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 518 KQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGF 631
KQ + + EY S G+ S++ DKETG +GF
Sbjct: 35 KQTVALKKADEYLSVHGDKADASIIHDKETGITTKIGF 72
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 512 GLKQDIEEEDLREYFSTFGNIVSVSVV 592
GL+ + E+DLR++F FG + S+S+V
Sbjct: 310 GLEGKVTEQDLRDHFYQFGELRSISMV 336
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Frame = +3
Query: 258 TDSSLKEFYEQWG-EIVDVVVMKDPKTK-------RSKGFGFITYSQAHMVDEAQNNRPH 413
T LK +E + DV+++K+P+ + RS+GFGF+T++ A +
Sbjct: 62 TQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPEDAQTAVKSLNG 121
Query: 414 K-IDGRIVEPKRAVPR 458
K + GR ++ ++ R
Sbjct: 122 KEVQGRTLKIAPSISR 137
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 306 DVVVMKDPKTKRSKGFGFITY 368
+V V+KDP +SKGFGF+++
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSF 561
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 506 CAGLKQDIEEEDLREYFSTFGNIVSVSVVT-DKETGKKRGL 625
C G + D EEE+L+E F+ NI+S+ +T D+E K G+
Sbjct: 1319 CDGYEDDFEEEELQE-FNAEDNILSLKGLTSDEEDPKPWGM 1358
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRI 431
T + LK + Q+G++V ++ + K ++ FG +T + + + Q+ ++ GR
Sbjct: 360 TRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTSEEAAKCIQHLHRTELHGRA 419
Query: 432 VEPKRAVPREEIKRPEASATVK 497
+ RA + + + + SA+ K
Sbjct: 420 ITVDRA-KGDRVSQTQGSASKK 440
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDGRIV 434
+ +KE +GE+ ++KD T SKG+ F Y + D A N D +++
Sbjct: 686 EDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQLGDKKLI 745
Query: 435 EPKRAV-PREEIKRPEA 482
+ +V ++ + P+A
Sbjct: 746 VQRASVGAKQNLNNPQA 762
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 374
+ L E+ GEI + + DP T +KGF F T+++
Sbjct: 166 EDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTE 203
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
++ L + I+E+DL+E +GN++ ++ D G G V F
Sbjct: 121 LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERD-SNGDSSGSALVRF 166
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +3
Query: 306 DVVVMKDPKTKRSKGFGFITY 368
+V+V+ D +T+RS+ FG++T+
Sbjct: 4 EVIVVYDRETRRSRNFGYVTF 24
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 324 DPKTKRSKGFGFITYSQAHMVDEAQNNRPHKI-DGRIVEPKRAVPREEIK 470
+P R +GFGF+T++ A ++A+ I DGR VE + + I+
Sbjct: 117 NPLNLRIEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVSLCMEQSYIR 166
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVD 661
+V L E+D++++F T+G ++ K G GFVEFD D +
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREIIL------KDGYGFVEFDYSDDAE 52
>SB_44083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 420 DGRIVEPKRAVPREEIKRPEASATV 494
D R VEP ++P E+KR A +V
Sbjct: 99 DNRAVEPPESIPNSEVKRSIADGSV 123
>SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07)
Length = 349
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
V G ++ ++L+EYF G IV + + E+ + +G F+EF
Sbjct: 82 VYVKGFPKEATLDELQEYFEGKGKIVFIMMRKTLESKEFKGSVFIEF 128
>SB_8562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 595 CHNTNRXNISKCTKILSQVFFFNVLLQSSTNN 500
C NT++ + CT + VFF ++++ + NN
Sbjct: 5 CRNTSQFSAFLCTSVSIFVFFLVIIIKINNNN 36
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,643,071
Number of Sequences: 59808
Number of extensions: 332697
Number of successful extensions: 1030
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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