Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060649.seq
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 111 6e-25
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 111 6e-25
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 111 6e-25
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 105 3e-23
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 105 3e-23
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 92 4e-19
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 92 4e-19
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 92 4e-19
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 78 5e-15
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 78 5e-15
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 51 9e-07
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 50 2e-06
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 45 4e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 45 4e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 8e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 8e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 42 3e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 42 4e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 42 4e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 42 4e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 42 4e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 0.002
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 0.002
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.002
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 0.002
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 40 0.002
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.004
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.004
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 38 0.005
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 38 0.005
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 38 0.007
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 38 0.007
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.009
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 37 0.012
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 37 0.012
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 37 0.012
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 37 0.016
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 36 0.021
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 36 0.027
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 36 0.027
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 36 0.027
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 35 0.047
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.063
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 35 0.063
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 34 0.083
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 34 0.083
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 34 0.083
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 34 0.083
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 34 0.11
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.11
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.11
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.11
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.14
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 33 0.19
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 31 0.58
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 31 0.58
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 31 0.58
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 31 0.58
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 31 0.58
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 31 0.58
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 31 1.0
Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical p... 30 1.3
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z74041-7|CAA98518.2| 335|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 28 5.4
Z73103-4|CAA97426.1| 585|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF025472-6|AAB71077.1| 441|Caenorhabditis elegans Hypothetical ... 27 9.5
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 111 bits (266), Expect = 6e-25
Identities = 47/85 (55%), Positives = 65/85 (76%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TTD ++EFY Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 435 EPKRAVPREEIKRPEASATVKKLFV 509
+PKRAVPR++ R E++ + K+L+V
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKRLYV 118
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
++ +G+++D E+ L EYF+ +G + ++ DK T K RG GFV FD +D VD+ LQ
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 677 Q 679
+
Sbjct: 175 K 175
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
K+ GL + ++ +RE++S FG I + V+ D T + RG GFV F G VD Q
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 677 Q 679
+
Sbjct: 84 R 84
Score = 48.0 bits (109), Expect = 6e-06
Identities = 16/74 (21%), Positives = 42/74 (56%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
T+ L E++ ++G + ++ D T++ +GFGF+T+ VD+ + H ++G +
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 438 PKRAVPREEIKRPE 479
++ + ++E+ + +
Sbjct: 186 VRKGLSKDEMSKAQ 199
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 190 SGDDYEEPEHTRKLFIGGL 246
SGD EPE+ RK+F+GGL
Sbjct: 12 SGDASLEPENLRKIFVGGL 30
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 111 bits (266), Expect = 6e-25
Identities = 47/85 (55%), Positives = 65/85 (76%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TTD ++EFY Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 435 EPKRAVPREEIKRPEASATVKKLFV 509
+PKRAVPR++ R E++ + K+L+V
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKRLYV 118
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
++ +G+++D E+ L EYF+ +G + ++ DK T K RG GFV FD +D VD+ LQ
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 677 Q 679
+
Sbjct: 175 K 175
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
K+ GL + ++ +RE++S FG I + V+ D T + RG GFV F G VD Q
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 677 Q 679
+
Sbjct: 84 R 84
Score = 48.0 bits (109), Expect = 6e-06
Identities = 16/74 (21%), Positives = 42/74 (56%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
T+ L E++ ++G + ++ D T++ +GFGF+T+ VD+ + H ++G +
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 438 PKRAVPREEIKRPE 479
++ + ++E+ + +
Sbjct: 186 VRKGLSKDEMSKAQ 199
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 190 SGDDYEEPEHTRKLFIGGL 246
SGD EPE+ RK+F+GGL
Sbjct: 12 SGDASLEPENLRKIFVGGL 30
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 111 bits (266), Expect = 6e-25
Identities = 47/85 (55%), Positives = 65/85 (76%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TTD ++EFY Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 435 EPKRAVPREEIKRPEASATVKKLFV 509
+PKRAVPR++ R E++ + K+L+V
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKRLYV 118
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
++ +G+++D E+ L EYF+ +G + ++ DK T K RG GFV FD +D VD+ LQ
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 677 Q 679
+
Sbjct: 175 K 175
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
K+ GL + ++ +RE++S FG I + V+ D T + RG GFV F G VD Q
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 677 Q 679
+
Sbjct: 84 R 84
Score = 48.0 bits (109), Expect = 6e-06
Identities = 16/74 (21%), Positives = 42/74 (56%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
T+ L E++ ++G + ++ D T++ +GFGF+T+ VD+ + H ++G +
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 438 PKRAVPREEIKRPE 479
++ + ++E+ + +
Sbjct: 186 VRKGLSKDEMSKAQ 199
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 190 SGDDYEEPEHTRKLFIGGL 246
SGD EPE+ RK+F+GGL
Sbjct: 12 SGDASLEPENLRKIFVGGL 30
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 105 bits (252), Expect = 3e-23
Identities = 44/80 (55%), Positives = 62/80 (77%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 449
++EFY Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 450 VPREEIKRPEASATVKKLFV 509
VPR++ R E++ + K+L+V
Sbjct: 61 VPRDDKNRSESNVSTKRLYV 80
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
++ +G+++D E+ L EYF+ +G + ++ DK T K RG GFV FD +D VD+ LQ
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 677 Q 679
+
Sbjct: 137 K 137
Score = 48.0 bits (109), Expect = 6e-06
Identities = 16/74 (21%), Positives = 42/74 (56%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
T+ L E++ ++G + ++ D T++ +GFGF+T+ VD+ + H ++G +
Sbjct: 88 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Query: 438 PKRAVPREEIKRPE 479
++ + ++E+ + +
Sbjct: 148 VRKGLSKDEMSKAQ 161
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 542 LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQQ 679
+RE++S FG I + V+ D T + RG GFV F G VD Q+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 46
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 105 bits (252), Expect = 3e-23
Identities = 44/80 (55%), Positives = 62/80 (77%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 449
++EFY Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 450 VPREEIKRPEASATVKKLFV 509
VPR++ R E++ + K+L+V
Sbjct: 61 VPRDDKNRSESNVSTKRLYV 80
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
++ +G+++D E+ L EYF+ +G + ++ DK T K RG GFV FD +D VD+ LQ
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 677 Q 679
+
Sbjct: 137 K 137
Score = 48.0 bits (109), Expect = 6e-06
Identities = 16/74 (21%), Positives = 42/74 (56%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
T+ L E++ ++G + ++ D T++ +GFGF+T+ VD+ + H ++G +
Sbjct: 88 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Query: 438 PKRAVPREEIKRPE 479
++ + ++E+ + +
Sbjct: 148 VRKGLSKDEMSKAQ 161
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 542 LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQQ 679
+RE++S FG I + V+ D T + RG GFV F G VD Q+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 46
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 91.9 bits (218), Expect = 4e-19
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TTD L ++ QWG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V
Sbjct: 60 TTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTV 119
Query: 435 EPKRAVPREEI 467
+ KRA+PRE++
Sbjct: 120 DSKRAIPREQM 130
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ GL D +E L YFS +G +V V+ D T RG GFV F
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 497 KVVCAGLKQDIEEED-LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCL 673
K++ G+ + D LR YF TFG + V ++ G+ RGLGFV ++ + DR CL
Sbjct: 148 KLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 201
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 91.9 bits (218), Expect = 4e-19
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TTD L ++ QWG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V
Sbjct: 80 TTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTV 139
Query: 435 EPKRAVPREEI 467
+ KRA+PRE++
Sbjct: 140 DSKRAIPREQM 150
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ GL D +E L YFS +G +V V+ D T RG GFV F
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 497 KVVCAGLKQDIEEED-LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCL 673
K++ G+ + D LR YF TFG + V ++ G+ RGLGFV ++ + DR CL
Sbjct: 168 KLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 221
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 91.9 bits (218), Expect = 4e-19
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TTD L ++ QWG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V
Sbjct: 81 TTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTV 140
Query: 435 EPKRAVPREEI 467
+ KRA+PRE++
Sbjct: 141 DSKRAIPREQM 151
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ GL D +E L YFS +G +V V+ D T RG GFV F
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 497 KVVCAGLKQDIEEED-LREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCL 673
K++ G+ + D LR YF TFG + V ++ G+ RGLGFV ++ + DR CL
Sbjct: 169 KLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 222
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 78.2 bits (184), Expect = 5e-15
Identities = 33/85 (38%), Positives = 58/85 (68%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TT +L++++ ++GE+ + +VM+DP TKR++GFGFIT+ VD+ NNR H++DG+ +
Sbjct: 56 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKI 115
Query: 435 EPKRAVPREEIKRPEASATVKKLFV 509
+PK A P+ + + KK+F+
Sbjct: 116 DPKVAFPKR--TQAKLVTKTKKVFI 138
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/69 (34%), Positives = 46/69 (66%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
+T +K+++E +G++ D ++M D T+R +GFGF+T+ + D+ H+I+G++V
Sbjct: 145 STLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
Query: 435 EPKRAVPRE 461
E K+A P+E
Sbjct: 205 ECKKAQPKE 213
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVC 670
KV GL ED+++YF T+G + ++ DK T + RG GFV FD + D+VC
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRV 667
K+ GL E+LR+YF FG + V+ D T + RG GF+ F VD+V
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 78.2 bits (184), Expect = 5e-15
Identities = 33/85 (38%), Positives = 58/85 (68%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TT +L++++ ++GE+ + +VM+DP TKR++GFGFIT+ VD+ NNR H++DG+ +
Sbjct: 56 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKI 115
Query: 435 EPKRAVPREEIKRPEASATVKKLFV 509
+PK A P+ + + KK+F+
Sbjct: 116 DPKVAFPKR--TQAKLVTKTKKVFI 138
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/69 (34%), Positives = 46/69 (66%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
+T +K+++E +G++ D ++M D T+R +GFGF+T+ + D+ H+I+G++V
Sbjct: 145 STLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
Query: 435 EPKRAVPRE 461
E K+A P+E
Sbjct: 205 ECKKAQPKE 213
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVC 670
KV GL ED+++YF T+G + ++ DK T + RG GFV FD + D+VC
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRV 667
K+ GL E+LR+YF FG + V+ D T + RG GF+ F VD+V
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 446 SSSKGRD*KTRS*CHR*KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGL 625
SS G D RS V + D+ E+ +R FS GN++S+ +V D+ETGK +G
Sbjct: 8 SSGVGNDRSQRS------VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGY 61
Query: 626 GFVEF 640
GF+EF
Sbjct: 62 GFIEF 66
Score = 34.3 bits (75), Expect = 0.083
Identities = 13/60 (21%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIV 434
++ +++ + + G ++ + ++ D +T + KG+GFI + + A +N +++ GRI+
Sbjct: 30 SEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRIL 89
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 428
T+D +L E++EQ+G+I + VV+ D T++S+G+GF+T + A + IDGR
Sbjct: 46 TSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGR 103
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
K+ GL ++ L EYF FG+I V+TD+ T K RG GFV +R C
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 677 QIP 685
P
Sbjct: 96 PNP 98
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +2
Query: 512 GLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
G +D+ E+ L F FG++V++S+ D E+GK RG GFVEFD
Sbjct: 17 GFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIV 434
T+ L + +G++V + + D ++ + +GFGF+ + A A N ++ G+ +
Sbjct: 23 TEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTI 82
Query: 435 EPKRAVPREEIKRPE 479
A P + +R +
Sbjct: 83 RVNFARPPKATERSQ 97
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
E+DL YFS GN+ +V +V D+ETG+ RG FVEF
Sbjct: 17 EDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 374
TT+ L ++ Q G + +V ++ D +T R +GF F+ +++
Sbjct: 15 TTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
T S L+ +++++G I V + DP T +GF IT+ ++A RPH IDG V
Sbjct: 36 TGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRV 95
Query: 435 EPKRAVP 455
+ + +P
Sbjct: 96 DVEPYIP 102
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQQ 679
+ L YF +G+I SV++ D +TG RG + FD D ++ Q+
Sbjct: 38 KSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQR 86
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
KV GL D E+DLR +F FG + + DK+T +R F+ F+ + D+ Q
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ G+ ++ EDL +F+ +G + V D+ G+ RG FVEF
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
++ L+ +EQ+G++ D+ D +TK + F FI + + D+A + R +
Sbjct: 122 SEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECD 181
Query: 438 PKRAVPR 458
K+AVP+
Sbjct: 182 VKKAVPQ 188
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 440
+ L + Q+GE+ V D RS+GF F+ ++ A R I G+ VE
Sbjct: 42 NEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEV 101
Query: 441 KRAVPREEIK 470
K A RE K
Sbjct: 102 KPAKSRENKK 111
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
KV GL D E+DLR +F FG + + DK+T +R F+ F+ + D+ Q
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ G+ ++ EDL +F+ +G + V D+ G+ RG FVEF
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVE 437
++ L+ +EQ+G++ D+ D +TK + F FI + + D+A + R +
Sbjct: 122 SEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECD 181
Query: 438 PKRAVPR 458
K+AVP+
Sbjct: 182 VKKAVPQ 188
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 440
+ L + Q+GE+ V D RS+GF F+ ++ A R I G+ VE
Sbjct: 42 NEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEV 101
Query: 441 KRAVPREEIK 470
K A RE K
Sbjct: 102 KPAKSRENKK 111
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
EE+L +FS+ G I +V +V D+ETG+ RG F+EF
Sbjct: 18 EEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF 53
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 374
TT+ L F+ G+I +V ++ D +T R +GF FI +++
Sbjct: 16 TTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAE 55
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+++D+ ++ LR++FS+FG I S V+ D E G+ +G GFV F+
Sbjct: 350 IEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 521 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYD 652
+ +++E L FS FG I S V+TD + GK +G GFV F D
Sbjct: 247 EHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Score = 35.5 bits (78), Expect = 0.036
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP--- 440
L + ++GEI VVM D + K KGFGF+ ++ +A K++ I+E
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFAD----QDAAGQAVEKLNDSILEGTDC 308
Query: 441 KRAVPREEIKRPEASATVKKLF 506
K +V R + K+ E SA +K+ +
Sbjct: 309 KLSVCRAQ-KKSERSAELKRKY 329
Score = 34.3 bits (75), Expect = 0.083
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 440
D L++ + +G I VM D + RSKGFGF+ + + A + K+ G
Sbjct: 356 DDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLY 414
Query: 441 KRAVPREEIKRPE-ASATVKKLFVL 512
R+E +R + AS +++L L
Sbjct: 415 VALAQRKEDRRAQLASQYMQRLATL 439
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+++D+ ++ LR++FS+FG I S V+ D E G+ +G GFV F+
Sbjct: 350 IEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 521 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYD 652
+ +++E L FS FG I S V+TD + GK +G GFV F D
Sbjct: 247 EHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Score = 35.5 bits (78), Expect = 0.036
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP--- 440
L + ++GEI VVM D + K KGFGF+ ++ +A K++ I+E
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFAD----QDAAGQAVEKLNDSILEGTDC 308
Query: 441 KRAVPREEIKRPEASATVKKLF 506
K +V R + K+ E SA +K+ +
Sbjct: 309 KLSVCRAQ-KKSERSAELKRKY 329
Score = 34.3 bits (75), Expect = 0.083
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEP 440
D L++ + +G I VM D + RSKGFGF+ + + A + K+ G
Sbjct: 356 DDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLY 414
Query: 441 KRAVPREEIKRPE-ASATVKKLFVL 512
R+E +R + AS +++L L
Sbjct: 415 VALAQRKEDRRAQLASQYMQRLATL 439
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGR 428
TT + L+ +E++G+I DV + +D +++SKGFGF+ + + + A + K +DGR
Sbjct: 30 TTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 539 DLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
DLR F +G+I V + DK + + +G GFV F
Sbjct: 34 DLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGR 428
TT + L+ +E++G+I DV + +D +++SKGFGF+ + + + A + K +DGR
Sbjct: 30 TTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 539 DLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
DLR F +G+I V + DK + + +G GFV F
Sbjct: 34 DLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
EE++ YF+ G++ +V +V D+ETG+ RG FVEF
Sbjct: 19 EEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
+ +D DL E+FS G + V ++TD TG+ +G+ +VEF
Sbjct: 32 IARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
T L+EF+ G + DV ++ D +T RSKG ++ +
Sbjct: 36 TRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
+ +D DL E+FS G + V ++TD TG+ +G+ +VEF
Sbjct: 177 IARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
T L+EF+ G + DV ++ D +T RSKG ++ +
Sbjct: 181 TRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 509 AGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVD 661
+G+ + + +L F FG I++ +++D TG +G+GFV FD D D
Sbjct: 133 SGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
L Q + +E++R F++ G I S +V DK TG+ G GFV +
Sbjct: 49 LPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
T ++ + GEI +++D T +S G+GF+ Y
Sbjct: 54 TQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
L+ + +G+I+ ++ D T SKG GF+ + + D A
Sbjct: 144 LESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVA 185
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L + ++++ L++ F ++GNI S V+TD E G+ +G GFV F+
Sbjct: 324 LDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFE 365
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 374
D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 330 DDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L + ++++ L++ F ++GNI S V+TD E G+ +G GFV F+
Sbjct: 264 LDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFE 305
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 374
D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 270 DDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 306
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L + ++++ L++ F ++GNI S V+TD E G+ +G GFV F+
Sbjct: 261 LDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFE 302
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 374
D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 267 DDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 303
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L + ++++ L++ F ++GNI S V+TD E G+ +G GFV F+
Sbjct: 324 LDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFE 365
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 374
D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 330 DDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
V L +++ + LRE F FG++ V+ D T K +G GFV + + +R Q
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+ L+E ++ +G++ D V++D T +SKG+GF++Y + + A
Sbjct: 35 NQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
V L +++ + LRE F FG++ V+ D T K +G GFV + + +R Q
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+ L+E ++ +G++ D V++D T +SKG+GF++Y + + A
Sbjct: 45 NQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
V L +++ + LRE F FG++ V+ D T K +G GFV + + +R Q
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 195
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+ L+E ++ +G++ D V++D T +SKG+GF++Y + + A
Sbjct: 148 NQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVCLQ 676
V L +++ + LRE F FG++ V+ D T K +G GFV + + +R Q
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+ L+E ++ +G++ D V++D T +SKG+GF++Y + + A
Sbjct: 116 NQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 512 GLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
GL + ++ LRE S +GNI S + DK T +G GFV+F+
Sbjct: 113 GLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFE 156
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
T D L+E ++G I + D T KG+GF+ +
Sbjct: 118 TNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 155
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 512 GLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
GL + ++ LRE S +GNI S + DK T +G GFV+F+
Sbjct: 87 GLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFE 130
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
T D L+E ++G I + D T KG+GF+ +
Sbjct: 92 TNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 129
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ + +++EE+DLR F FG I +++ DK TG +G F+ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L Q+ + +L + F+ FG+IVS V D+ T + + GFV +D
Sbjct: 436 LPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYD 478
Score = 34.7 bits (76), Expect = 0.063
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
+ L+ +EQ+G+I + ++KD T KG F+TY
Sbjct: 42 EKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ L + E+++R F+TFG + V+V+ + G +G FV++
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKY 171
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ L + EE+LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L QD + DL F+ FG I+S V DK T + GFV ++
Sbjct: 506 LPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYE 548
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 398
++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ L + EE+LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L QD + DL F+ FG I+S V DK T + GFV ++
Sbjct: 506 LPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYE 548
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 398
++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFV 634
+ GL + E D+ FS +G +++++++ DK+TGK +G F+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFL 84
Score = 34.3 bits (75), Expect = 0.083
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 282 YEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 404
+ Q+GE++++ +++D T +SKGF F+ Y A +N
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ L + EE+LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L QD + DL F+ FG I+S V DK T + GFV ++
Sbjct: 435 LPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYE 477
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 398
++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ L + EE+LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 398
++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ L + EE+LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 398
++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ L + EE+LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L QD + DL F+ FG I+S V DK T + GFV ++
Sbjct: 506 LPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYE 548
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 398
++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ + +++EE+DLR F FG I +++ DK TG +G F+ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L Q+ + +L + F+ FG+IVS V D+ T + + GFV +D
Sbjct: 436 LPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYD 478
Score = 34.7 bits (76), Expect = 0.063
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
+ L+ +EQ+G+I + ++KD T KG F+TY
Sbjct: 42 EKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
K+ L + E+++R F+TFG + V+V+ + G +G FV++
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKY 171
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
V L +D+ E L+ F+ FG + V+ D +T K +G GFV F
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +3
Query: 270 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
LK + ++GE+ + V++D +T++SKG+GF+++ + A
Sbjct: 151 LKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENA 192
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSV 589
V + Q + DLR+ FST+G+I V +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
E+DLR+ F FG I +V D+ +G RG GF+ F+
Sbjct: 89 EKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS 371
TT+ L++ + ++GEI ++ D + S+GFGFI ++
Sbjct: 87 TTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVD 661
+ GL + + E L E G +VSV++ D+ T +G GFVEF G + D
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
++S L E Q G +V V + KD T +GFGF+ + D A
Sbjct: 25 SESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVD 661
+ GL + + E L E G +VSV++ D+ T +G GFVEF G + D
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
++S L E Q G +V V + KD T +GFGF+ + D A
Sbjct: 35 SESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 80
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 428
TT++ L+E +E++ + DV ++K +SKG+GFIT+ +E + P +++ R
Sbjct: 77 TTETELREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEIRKLTPKQLEFR 133
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 428
TT++ L+E +E++ + DV ++K +SKG+GFIT+ +E + P +++ R
Sbjct: 78 TTETELREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEIRKLTPKQLEFR 134
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIV 434
TTD ++++E G +V + K SKGFGF+ S ++ H IDGR
Sbjct: 184 TTDECFQKYFEDIGTVVFCEI-KRKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRC 242
Query: 435 EPKRAVPREEIKRPEAS 485
+ K R++ RP S
Sbjct: 243 DVKVPDGRDKQGRPSIS 259
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
V L +I+ LRE F FG + ++ D T K +G GFV + + +R
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAER 188
Score = 36.7 bits (81), Expect = 0.016
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +3
Query: 264 SSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+ L+E + ++GE+ + +++D T + KG+GF++Y + + A
Sbjct: 146 TKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 530 EEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEF 640
+E+DL+ F +G + V VV DK+TG +G VEF
Sbjct: 291 KEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
T + L+ ++++GE+ +V V+ D KT KGF + +
Sbjct: 290 TKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
T+ L++F+E++G+I D +K K + +GF F+ +
Sbjct: 15 TEQQLRKFFEKYGQISD-ASLKYTKEGKFRGFAFVGF 50
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVE 437
D LK +E++G + DV ++ + + SKGFGF+T + + A Q I+GR +E
Sbjct: 166 DPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIE 223
Query: 438 PKRAVPREEIKR 473
A R K+
Sbjct: 224 VNCATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVE 437
D LK +E++G + DV ++ + + SKGFGF+T + + A Q I+GR +E
Sbjct: 166 DPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIE 223
Query: 438 PKRAVPREEIKR 473
A R K+
Sbjct: 224 VNCATARVHSKK 235
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 422 RKNCRAKTSSSKGRD*KTRS*CHR*KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDK 601
R R + +S R RS +VV L +++ + L E FS +G I +V + D+
Sbjct: 109 RSGSRQRRRASPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDR 168
Query: 602 -ETGKKRGLGFVEFDGYDXVDR 664
RG G+VE+D + ++
Sbjct: 169 FHNHVHRGYGYVEYDNLEDAEK 190
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
E++L YF FGN++ + V ++ TG +G +V FD
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFD 81
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 515 LKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
L QD + DL F+ FG I+S V DK T + GFV ++
Sbjct: 342 LPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYE 384
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFST-FGNIVSVSVVTDKETGKKRGLGFVEF 640
+ L +I E+ L +FS G + +V +V DK+TGK +G FV F
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVE 437
+ L + +G ++ V ++ + + SKGFGF+T ++A+ + GRI+E
Sbjct: 64 EQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAALHESHVQGRIIE 121
Query: 438 PKRAVP--REEIKRPE 479
+RA P R+ I P+
Sbjct: 122 VRRATPTRRKLINNPQ 137
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
++ + + E+DL F +G ++SV +VT+ + G K G GFV D + ++
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN-DRGSK-GFGFVTLDSIESCEK 105
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVE 437
+ L + +G ++ V ++ + + SKGFGF+T ++A+ + GRI+E
Sbjct: 64 EQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAALHESHVQGRIIE 121
Query: 438 PKRAVP--REEIKRPE 479
+RA P R+ I P+
Sbjct: 122 VRRATPTRRKLINNPQ 137
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
++ + + E+DL F +G ++SV +VT+ + G K G GFV D + ++
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN-DRGSK-GFGFVTLDSIESCEK 105
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGL 625
K+ L + EE+LRE F+ FG+I SV+ D++ GK RG+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGM 184
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 398
++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.063
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+EDL FS FG I + +V D+ +G F+EFD
Sbjct: 254 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 290
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.063
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+EDL FS FG I + +V D+ +G F+EFD
Sbjct: 254 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 290
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 34.7 bits (76), Expect = 0.063
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 533 EEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+EDL FS FG I + +V D+ +G F+EFD
Sbjct: 185 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 221
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.063
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 536 EDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVD 661
E++ E+F G IV ++ DK T K++ ++EFD ++
Sbjct: 69 EEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIE 110
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+T ++E ++ G+IV + KD TK+ K F +I + + ++ A
Sbjct: 66 STIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.083
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVE 437
+ L +E+ G +VDV ++ + + SKGFGF+T D A+ I+GR VE
Sbjct: 113 EPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVE 170
Query: 438 PKRAVPREEIKRPEASATV 494
A R K+ + +V
Sbjct: 171 VNLATQRVHNKKAKPLMSV 189
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 34.3 bits (75), Expect = 0.083
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 536 EDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVD 661
E++ E+F G+IV ++ DK T K++ ++EFD ++
Sbjct: 75 EEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIE 116
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.083
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVE 437
+ L +E+ G +VDV ++ + + SKGFGF+T D A+ I+GR VE
Sbjct: 113 EPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVE 170
Query: 438 PKRAVPREEIKRPEASATV 494
A R K+ + +V
Sbjct: 171 VNLATQRVHNKKAKPLMSV 189
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 34.3 bits (75), Expect = 0.083
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 524 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGF 631
D E+D+R+ FSTFG I +S +K+ +KR L F
Sbjct: 194 DYSEDDIRKLFSTFGIISHISSAIEKKDRRKRILEF 229
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 500 VVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
V + ++ E+D+ + FS +G I ++ + D+ TG +G VE++
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYE 104
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+V + + D+ E DL+ F FG IV + RG G++EF+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFN 256
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+V + + D+ E DL+ F FG IV + RG G++EF+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFN 256
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 497 KVVCAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFD 643
+V + + D+ E DL+ F FG IV + RG G++EF+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFN 256
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 395
+++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
+ +L +E+ G+I D+ +M DP + S+G+ F+TY
Sbjct: 213 EDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY 248
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 YEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPR 458
+E+ G +VDV ++ + + SKGFGF+T D A+ I+GR VE A R
Sbjct: 2 FEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
Query: 459 EEIKRPEASATV 494
K+ + +V
Sbjct: 60 VHNKKAKPLMSV 71
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 539 DLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXV 658
++ E+F+ G + V++ DK TG ++ FVEF + V
Sbjct: 61 EIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESV 100
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 479
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 480 ASATVKKLFVL 512
+A K+ +VL
Sbjct: 1804 ETARFKRSYVL 1814
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 479
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 98 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 157
Query: 480 ASATVKKLFVL 512
+A K+ +VL
Sbjct: 158 ETARFKRSYVL 168
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 479
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 179 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 238
Query: 480 ASATVKKLFVL 512
+A K+ +VL
Sbjct: 239 ETARFKRSYVL 249
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 479
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 184 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 243
Query: 480 ASATVKKLFVL 512
+A K+ +VL
Sbjct: 244 ETARFKRSYVL 254
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 479
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 480 ASATVKKLFVL 512
+A K+ +VL
Sbjct: 1804 ETARFKRSYVL 1814
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 300 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 479
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 480 ASATVKKLFVL 512
+A K+ +VL
Sbjct: 1804 ETARFKRSYVL 1814
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 512 GLKQDIEEEDLREYFS-TFGNIVSVSVVTDKETGKKRGLGFVEFDGYD 652
G+ + ++ +L +F T+G++V V + D + RG G V F YD
Sbjct: 292 GVPRPLKAVELAHFFEQTYGHVVCVGIDIDNKFKYPRGSGRVAFSDYD 339
>Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical
protein F32D8.13 protein.
Length = 187
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 548 EYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDRVC 670
EYFS V++ + T +E K+RG FVE G D + C
Sbjct: 112 EYFSANYRTVTIRIETSEEDRKQRGYQFVE--GVDDAESEC 150
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 521 QDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGLGFVEFDGYDXVDR 664
Q + E+DL ++F +G+I + V+T+K G F+EF + +R
Sbjct: 248 QQVTEKDLNDFFYQYGDIRCLRVLTEK------GCAFIEFTTREAAER 289
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 255 TTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS----QAHMVDEAQNNRPHKID 422
T + +KE ++G+I ++ K + SKG F+ +S ++ ++ ++ ID
Sbjct: 274 TKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGVEDG--VIID 331
Query: 423 GRIVEPKRAVPREEIKRPEASATVK 497
R+V+ A+PR+E E K
Sbjct: 332 NRLVKANLAIPRKEAADMEKEKLTK 356
>Z74041-7|CAA98518.2| 335|Caenorhabditis elegans Hypothetical
protein T03F7.4 protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 610 SSFFICHNTNRXNISKCTKILSQVFFFNVLLQ 515
SSF++C +T +S+ TK L + +F +V +Q
Sbjct: 220 SSFYLCKSTTSLAVSERTKKLKRKYFLSVCIQ 251
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +3
Query: 261 DSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
+ L++ + + G ++ + + +D T KGF F+T+
Sbjct: 189 EDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +3
Query: 258 TDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 368
+D L + + ++ V+++ +T +SKG+GF+++
Sbjct: 215 SDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
>Z73103-4|CAA97426.1| 585|Caenorhabditis elegans Hypothetical
protein C08F8.5 protein.
Length = 585
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -3
Query: 667 YSVNXIITIKLYKTQAPFLSSFFICHNTNRXNISKCTKILSQVFFFNVLLQSSTNNFL 494
Y + I L A S+ F +N N IS C +L V N+ L N FL
Sbjct: 430 YETSQSIHKFLICNNATLFSNVFSPYNLNDLLISNCQNLLVNVDRGNIFLGQDVNKFL 487
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical
protein R09E10.5 protein.
Length = 1459
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 419 NFVRPIILSFINHMGLRICNKSKSF*SLGFWVFHY 315
NF P IL+ N+MG+RI + S LG ++ Y
Sbjct: 514 NFTNPDILTNGNNMGVRISDDSMYGVQLGLYIVGY 548
>AF025472-6|AAB71077.1| 441|Caenorhabditis elegans Hypothetical
protein ZK250.8 protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 524 LASVQHKQLFNGGTSFWSFNLFPWN 450
L S Q+K +F G TS W F WN
Sbjct: 228 LHSTQNKAIF-GATSNWGFQFISWN 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,296,558
Number of Sequences: 27780
Number of extensions: 271404
Number of successful extensions: 1013
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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