Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060648.seq
(436 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 71 5e-13
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639... 36 0.011
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 35 0.025
09_06_0010 - 20193577-20193921,20194014-20194160,20194239-201944... 34 0.044
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 31 0.41
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 31 0.41
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 31 0.41
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 30 0.94
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 30 0.94
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 29 1.2
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 29 1.2
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324... 29 1.2
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 29 1.6
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 29 1.6
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 29 2.2
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 29 2.2
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 29 2.2
08_02_1470 - 27350173-27350643,27350721-27351167 28 2.9
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 28 2.9
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883... 28 3.8
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 28 3.8
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 28 3.8
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 27 5.0
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 27 5.0
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 27 5.0
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 27 5.0
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 27 6.6
08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736 27 6.6
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 27 6.6
01_05_0273 - 20283965-20284085,20284197-20284348,20284828-202850... 27 6.6
10_07_0138 + 13325418-13325954 27 8.7
06_01_0182 + 1413551-1413794,1413883-1414139,1414241-1414387,141... 27 8.7
04_04_0168 + 23259459-23260001,23260883-23262780,23263000-232631... 27 8.7
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 70.5 bits (165), Expect = 5e-13
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +2
Query: 62 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDD 229
MP VSVK W KE +P +E++T PV+FK Q++ LTGV PERQK++ KG L+DD
Sbjct: 1 MPTVSVK--WQKETFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDD 54
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +1
Query: 247 IDDNALVLVMGSKXXDVPAAPVEQTRFVEDMNXAELATAMDMPEGLINXGNTCYMNXTVQ 426
+ D ++++G+ ++ AP + FVED+ E A+ GL N GNTCYMN T+Q
Sbjct: 62 VKDGQKLMMIGTAD-EIVKAPEKGPVFVEDLPEEEQVVALGHSAGLYNLGNTCYMNSTLQ 120
Query: 427 XL 432
L
Sbjct: 121 CL 122
>08_02_0067 -
11863092-11863104,11863432-11863547,11863610-11863950,
11864978-11865331,11866055-11866150,11866812-11866980,
11867541-11867618,11867745-11867926,11868010-11868094,
11868545-11868648,11869510-11869590,11870123-11870240,
11871299-11871430,11871635-11871788,11871838-11871917
Length = 700
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 71 VSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDD 229
+ +K+K ++ VN L K +I +TG+ E+Q+++C+G L+DD
Sbjct: 103 IEIKIKTLDSQTYNLRVNKRVPVPLLKEKIATVTGILSEQQRLICRGRVLKDD 155
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 35.1 bits (77), Expect = 0.025
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 277 GSKXXDVP--AAPVEQTRFVEDMNXAELATAMDMPEGLINXGNTCYMNXTVQXL 432
G D P AAPV++ V +N + +P GL N GN C++N ++Q L
Sbjct: 283 GGPAIDTPTTAAPVDE--LVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQAL 334
>09_06_0010 -
20193577-20193921,20194014-20194160,20194239-20194495,
20194619-20194826
Length = 318
Score = 34.3 bits (75), Expect = 0.044
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 62 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCK 208
+P + VKVK+ +Y ++ +N+ K Q+ A TG+ PE QK+V K
Sbjct: 45 VPTIRVKVKFNG-VYHEIYINSQASFGELKKQLSAPTGLHPEDQKIVYK 92
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 31.1 bits (67), Expect = 0.41
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL+N GNTC+MN +Q L
Sbjct: 350 GLLNLGNTCFMNSAIQCL 367
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 31.1 bits (67), Expect = 0.41
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 376 EGLINXGNTCYMNXTVQXL 432
+G++N GNTCY+N VQ L
Sbjct: 193 KGILNLGNTCYLNSLVQCL 211
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 31.1 bits (67), Expect = 0.41
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 110 DVEVNTDDEPVLFKAQIFALTGVQPERQKVV 202
+VE +T+ + + QIF+LT V PE QK+V
Sbjct: 24 EVEYDTEHGLDILRLQIFSLTSVPPELQKIV 54
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 29.9 bits (64), Expect = 0.94
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 373 PEGLINXGNTCYMNXTVQXL 432
P GL+N GN+CY N +Q L
Sbjct: 378 PFGLVNLGNSCYANAVLQCL 397
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 29.9 bits (64), Expect = 0.94
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 373 PEGLINXGNTCYMNXTVQXL 432
P GL N GN+CY N +Q L
Sbjct: 352 PRGLFNCGNSCYANAVLQCL 371
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL N GNTC+MN VQ L
Sbjct: 272 GLDNLGNTCFMNSAVQCL 289
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
G+ N GNTCY+N VQ L
Sbjct: 302 GITNLGNTCYLNSLVQCL 319
>07_01_0426 +
3239274-3239386,3239472-3239702,3242516-3242642,
3242729-3242788,3242868-3242960,3243073-3243369,
3243450-3243761,3243857-3244114,3244227-3244375,
3244470-3245102,3245367-3245640,3245736-3245777,
3246332-3246586,3246700-3246711
Length = 951
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL N GNTC+MN ++Q L
Sbjct: 263 GLENLGNTCFMNSSIQCL 280
>10_01_0345 -
3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL N GNTC+MN +Q L
Sbjct: 312 GLHNLGNTCFMNSAIQSL 329
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 349 ELATAMDMPEGLINXGNTCYMNXTVQXL 432
+L + + P GL N G TCY N +Q L
Sbjct: 118 DLRDSTETPAGLTNLGATCYANSILQCL 145
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 307 PVEQTRFVEDMNXAELATAMDMPEGLINXGNTCYMNXTVQXL 432
P E T F ++ P GL N GN+CY N +Q L
Sbjct: 427 PSEPTHFPYELFIKLYEKVELQPFGLHNLGNSCYANAVLQCL 468
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL N GNTCY+N +Q L
Sbjct: 101 GLQNLGNTCYLNSVLQCL 118
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL N GNTCY+N +Q L
Sbjct: 139 GLQNFGNTCYLNSVLQCL 156
>08_02_1470 - 27350173-27350643,27350721-27351167
Length = 305
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 62 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVV 202
+P + VKVK+ +Y ++ +N+ K + TG+ P+ QKVV
Sbjct: 39 VPTIRVKVKYNG-VYHEIYINSQASFGELKKLLSEKTGLHPDDQKVV 84
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 370 MPEGLINXGNTCYMNXTVQXL 432
+P GL+N GN+C+ N +Q L
Sbjct: 202 LPCGLLNCGNSCFANVVLQCL 222
>08_02_1345 -
26286448-26286679,26287483-26288038,26288068-26288358,
26288953-26290516
Length = 880
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 376 EGLINXGNTCYMNXTVQXL 432
+G+ N GNTCY+N +Q L
Sbjct: 298 KGIPNLGNTCYLNSLMQCL 316
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 376 EGLINXGNTCYMNXTVQXL 432
+G+ N GNTCY+N +Q L
Sbjct: 244 KGIPNLGNTCYLNSLLQCL 262
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
G+ N GNTCY+N +Q L
Sbjct: 206 GIPNFGNTCYLNAVLQCL 223
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
G+ N GNTCY+N +Q L
Sbjct: 570 GMPNLGNTCYLNALLQCL 587
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL N GNTCY N +Q L
Sbjct: 24 GLENFGNTCYCNSVLQAL 41
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL N GNTCY N +Q L
Sbjct: 24 GLENFGNTCYCNSVLQAL 41
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
GL N GNTCY N +Q L
Sbjct: 73 GLENFGNTCYCNSVLQAL 90
>09_03_0058 +
11950668-11950701,11951068-11951106,11951586-11951982,
11952016-11952314,11953743-11956795
Length = 1273
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = -1
Query: 271 QVLRRYRQFKIAPCVIP*CDSFANDFLSLWLDPCQCKYLRLEQYRFIVC 125
+ L Y+ + C+ CD N L W D R+ RFI C
Sbjct: 820 ECLNTYKTLRSIVCIGVGCDIITNSVLETWFD----HLTRIRMLRFISC 864
>08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736
Length = 869
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
G+ N GNTCY+N +Q L
Sbjct: 304 GIPNLGNTCYVNALLQCL 321
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 379 GLINXGNTCYMNXTVQXL 432
G+ N GNTCY+N +Q L
Sbjct: 341 GMPNLGNTCYINALLQCL 358
>01_05_0273 -
20283965-20284085,20284197-20284348,20284828-20285001,
20285082-20285331,20285782-20285898,20286412-20286474,
20286568-20286740
Length = 349
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 249 NLKLPHVSSRNVTPL-QTTFCLSGWT 175
+L L H+SSRNV P T + WT
Sbjct: 156 SLNLQHLSSRNVVPTGSTAYTTKAWT 181
>10_07_0138 + 13325418-13325954
Length = 178
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 90 GARKCTQTWR*IQTMNRYCSRR 155
GAR+C++ WR + CSRR
Sbjct: 83 GARRCSRRWRRSRRWRSRCSRR 104
>06_01_0182 +
1413551-1413794,1413883-1414139,1414241-1414387,
1414487-1414804
Length = 321
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 62 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCK 208
+P + VKVK + ++ +N+ K + A TG+ P+ QKV+ K
Sbjct: 57 VPTIRVKVKHAGITH-EIYINSQASFGELKKMVAARTGLHPDDQKVMYK 104
>04_04_0168 +
23259459-23260001,23260883-23262780,23263000-23263150,
23263851-23264669
Length = 1136
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 83 VKWGKEMYPDVEVNTDDEPVLF 148
++W E+ PD+E+ TD +F
Sbjct: 527 LRWDVEVIPDIEITTDGSKYIF 548
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,533,849
Number of Sequences: 37544
Number of extensions: 223611
Number of successful extensions: 446
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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