Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060648.seq
         (436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        25   1.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   2.7  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   3.6  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   3.6  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   6.2  
AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    23   6.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   8.2  

>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 324 TCLFHWCC 301
           +C FHWCC
Sbjct: 75  SCTFHWCC 82


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -1

Query: 181  LDPCQCKYLRLEQYRFIVCIHLHVWVHFLAPFYLH*NVRHFGLFCTFSFSEIILKPCSRA 2
            L   Q  +L +  Y  IV + + +      P +         LF T  FS+ I+KP S+A
Sbjct: 2990 LQTLQKGFLTVGFYSLIVSLRMSLISESAIPEFTAAEASINVLFSTEQFSDFIVKPLSKA 3049


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 122  NTDDEPVLFKAQIFALTGVQPERQKVV 202
            + D   V   +  +++TGV+PE++ VV
Sbjct: 1270 SADSNSVATHSSYYSVTGVEPEKEFVV 1296


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 113 VEVNTDDEPVLFKAQIFALTGVQPERQ 193
           VEVNTDD+ VL    +   +  Q E Q
Sbjct: 132 VEVNTDDQIVLEDGSVEGESNEQEEAQ 158


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 180 SQRDKKSFAKESHYGMTH 233
           +Q DKK  AK + Y +TH
Sbjct: 21  AQTDKKQCAKNNEYCLTH 38


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 84  TFTETLGISGYFARSPFQKLYLNR 13
           T  +T  I G+F   P  +LY NR
Sbjct: 91  TGMQTAVIEGFFHPDPLDELYENR 114


>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 199 DFLSLWLDPCQCKYLRLEQYR 137
           DF + W  PC+    +LE+++
Sbjct: 26  DFFATWCGPCKVIAPKLEEFQ 46


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
 Frame = +3

Query: 102 CTQTW--R*IQTMNRYCSR 152
           C   W    IQT+N+YC++
Sbjct: 775 CASLWLGNAIQTLNKYCAK 793


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,939
Number of Sequences: 2352
Number of extensions: 9047
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)