Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060647.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.015
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   2.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 0.015
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = -1

Query: 266 IIIILYCSFYLIIAYILGMSCLIIMMLLTFNYYYFYIL 153
           ++IIL C +Y   A+IL  +  +++++  + +YY ++L
Sbjct: 231 VLIILLCIYYFYYAFIL-FTVHLLLLVCIYYFYYMHLL 267



 Score = 29.5 bits (63), Expect = 0.027
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -1

Query: 269 PIIIILYCSFYLIIAYILGMSCLIIMMLLTFNYYYFYIL 153
           P I   Y +F +   ++L   C++I++L  + +YY +IL
Sbjct: 210 PCIYYFYSAFIIFTIHLL-FYCVLIILLCIYYFYYAFIL 247



 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -1

Query: 263 IIILYCSFYLIIAYILGMSCLIIM---MLLTFNYYYFYILLRD*MC 135
           +++L C +Y    ++L     II    +L     YYFY  L   +C
Sbjct: 252 LLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLC 297



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -1

Query: 263 IIILYCSFYLIIAYILGMSCLII---MMLLTFNYYYFYILLRD*MCFNL*GKMLFEVQAT 93
           ++ L CS Y  +  +     +I     +L T+ +YY +I+L     F     ++F V   
Sbjct: 70  LLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYY-AFIIFTVHLL 128

Query: 92  FVVSLSY 72
           F++ + Y
Sbjct: 129 FLLCIYY 135


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 632 PTKVSISSNTSARTSPES 685
           PT VSI++NTS  +S  S
Sbjct: 156 PTPVSINNNTSTSSSASS 173


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 142 KCASICEVKCCLKC 101
           K  SI   KCC KC
Sbjct: 232 KVKSILNKKCCEKC 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,947
Number of Sequences: 336
Number of extensions: 2661
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)