Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060647.seq
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY141972-1|AAN10255.1| 1738|Homo sapiens putative 4 repeat volta...    32   1.7  
AL356778-1|CAI16648.1| 1738|Homo sapiens voltage gated channel l...    32   1.7  
AL354891-1|CAH73919.1| 1738|Homo sapiens voltage gated channel l...    32   1.7  
AL138707-1|CAI40711.1| 1738|Homo sapiens voltage gated channel l...    32   1.7  

>AY141972-1|AAN10255.1| 1738|Homo sapiens putative 4 repeat
            voltage-gated ion channel protein.
          Length = 1738

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/32 (37%), Positives = 25/32 (78%)
 Frame = -1

Query: 260  IILYCSFYLIIAYILGMSCLIIMMLLTFNYYY 165
            ++ +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1424 LMYFCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL356778-1|CAI16648.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/32 (37%), Positives = 25/32 (78%)
 Frame = -1

Query: 260  IILYCSFYLIIAYILGMSCLIIMMLLTFNYYY 165
            ++ +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1424 LMYFCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL354891-1|CAH73919.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/32 (37%), Positives = 25/32 (78%)
 Frame = -1

Query: 260  IILYCSFYLIIAYILGMSCLIIMMLLTFNYYY 165
            ++ +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1424 LMYFCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL138707-1|CAI40711.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/32 (37%), Positives = 25/32 (78%)
 Frame = -1

Query: 260  IILYCSFYLIIAYILGMSCLIIMMLLTFNYYY 165
            ++ +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1424 LMYFCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,095,291
Number of Sequences: 237096
Number of extensions: 1416261
Number of successful extensions: 1877
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1877
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)