Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060646.seq
(686 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.17
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 36 0.93
UniRef50_UPI0001509FD6 Cluster: conserved hypothetical protein; ... 36 1.2
UniRef50_A5DG98 Cluster: Predicted protein; n=1; Pichia guillier... 36 1.2
UniRef50_UPI0000DA1CC4 Cluster: PREDICTED: hypothetical protein;... 35 1.6
UniRef50_A3HLZ5 Cluster: 200 kDa antigen p200, putative; n=1; Ps... 35 1.6
UniRef50_UPI0000E48645 Cluster: PREDICTED: similar to CG7628-PA;... 34 2.8
UniRef50_A3LSZ4 Cluster: Predicted protein; n=1; Pichia stipitis... 34 2.8
UniRef50_Q93MN5 Cluster: LaaP; n=2; Lactobacillus sakei|Rep: Laa... 34 3.7
UniRef50_Q5H1X1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_UPI00015B5F58 Cluster: PREDICTED: similar to CG7602-PA;... 33 8.6
UniRef50_A0M756 Cluster: Putative uncharacterized protein; n=2; ... 33 8.6
UniRef50_Q9U0J3 Cluster: Putative uncharacterized protein PFD046... 33 8.6
UniRef50_Q22DK9 Cluster: B-box zinc finger family protein; n=1; ... 33 8.6
UniRef50_A0DBT5 Cluster: Chromosome undetermined scaffold_446, w... 33 8.6
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 29 SNVTKVKKPDLSKEIDSLDKRISKQTITSETIERKSVMTSSHKSETSSTVTKKFGNF 199
+N TK KP+ KEI + ++ SK T T+++IE+K S K + + +K NF
Sbjct: 438 NNKTKTTKPENKKEITKIQEQPSKSTTTTKSIEKKPTTIESKKID--KDIKRKENNF 492
>UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1;
Picrophilus torridus|Rep: ATP-dependent RNA helicase -
Picrophilus torridus
Length = 387
Score = 35.9 bits (79), Expect = 0.93
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Frame = -2
Query: 382 KNLMFLLSLVEHNENLKNKIYTRFLTTKHGSLTTSTVLDRC-------HGDSCQRTK 233
K LLS ++ N ++K I+ R TKHG++ S +L++C HGD QR++
Sbjct: 225 KKFSALLSYIDENRDMKRIIFVR---TKHGAVVLSEILNKCGFKNVTLHGDMRQRSR 278
>UniRef50_UPI0001509FD6 Cluster: conserved hypothetical protein;
n=1; Tetrahymena thermophila SB210|Rep: conserved
hypothetical protein - Tetrahymena thermophila SB210
Length = 509
Score = 35.5 bits (78), Expect = 1.2
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +2
Query: 20 QTTSNVTKVKKPDLSKEIDSLDKRISKQTITSETIERKSVMTSSHKSETSSTVTKKFGNF 199
Q T+++ + K PDLS+++ L +I KQ+I S+ I + S ET FGN
Sbjct: 313 QKTADIIQTKNPDLSQKLSQLAFQI-KQSIYSKAITKDINGNSVFAYETDG-----FGNH 366
Query: 200 *KVNDANCRGVL 235
K++DAN +L
Sbjct: 367 FKMDDANIPSLL 378
>UniRef50_A5DG98 Cluster: Predicted protein; n=1; Pichia
guilliermondii|Rep: Predicted protein - Pichia
guilliermondii (Yeast) (Candida guilliermondii)
Length = 1279
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 26 TSNVTKVKKPDLSKEIDSLDKRISKQTITSETIERKSVMTSSHKSETSSTVT 181
TS + D + S +S ++SET+E SV S KSE SS VT
Sbjct: 861 TSGPATISTSDTISAVSSSGTPVSNSDVSSETVESSSVTFSGAKSEVSSDVT 912
>UniRef50_UPI0000DA1CC4 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 467
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +1
Query: 22 DHQQRDEGQEAGSVEGDRQPGQEDLKANDHLGDYRKEVRNDQLSQIGDQLHRHQEIRQLL 201
D + ++E +E G EGD + +E+ + + GD E ++ + GD+ H ++ +
Sbjct: 397 DKEDKEEEEEEGEEEGDEEDEEEEEEGEEE-GDEEDEEEEEEGEEEGDEEHEEEDDEEEE 455
Query: 202 EGK 210
EG+
Sbjct: 456 EGE 458
>UniRef50_A3HLZ5 Cluster: 200 kDa antigen p200, putative; n=1;
Pseudomonas putida GB-1|Rep: 200 kDa antigen p200,
putative - Pseudomonas putida (strain GB-1)
Length = 477
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 4 HEVRLPDHQQRDEGQEAGSVEGDRQPGQEDLKA 102
H VR QQRD+GQEA + RQPG + L A
Sbjct: 123 HRVRRGHRQQRDQGQEARGTDLLRQPGSQRLHA 155
>UniRef50_UPI0000E48645 Cluster: PREDICTED: similar to CG7628-PA;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to CG7628-PA - Strongylocentrotus purpuratus
Length = 540
Score = 34.3 bits (75), Expect = 2.8
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +2
Query: 5 TRSD-YQTTSNVTKVKKP--DLSKEIDSLDKRISKQTITSETIERKSVMTSSHKSETSST 175
TRSD Q T VK P D ++D +D ++ ++ + +E+ S+++S S TSS
Sbjct: 271 TRSDDLQEVKMDTDVKIPLSDEGIDVDIVDGKMKEENEAAVPVEQDSMISSGPSSMTSSP 330
Query: 176 VTKKFGNF*KVNDANCRGVL 235
TK F K+N + +L
Sbjct: 331 DTKHCTRFGKLNTGKWKRLL 350
>UniRef50_A3LSZ4 Cluster: Predicted protein; n=1; Pichia stipitis|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 4979
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 22 DHQQRDEGQEAGSV-EGDRQPGQEDLKANDHLGDYRKEVRNDQLSQIGDQL----HRHQE 186
D+Q +E GS P Q+D + ++ + D +++ + L Q+GD L R QE
Sbjct: 4476 DNQVSEENDNIGSTGNASSDPNQQDKEEDNSVKDDARDMAKESLKQLGDTLKEFHRRRQE 4535
Query: 187 IRQLLEGK*RKLSWRAS 237
I++ + + K+ +A+
Sbjct: 4536 IKEAAKEEKEKVEEKAN 4552
>UniRef50_Q93MN5 Cluster: LaaP; n=2; Lactobacillus sakei|Rep: LaaP -
Lactobacillus sakei
Length = 183
Score = 33.9 bits (74), Expect = 3.7
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Frame = +2
Query: 2 GTRSDYQTTSNVTKVKKPDLSK--EIDSLDKRISKQT--ITSETIERKSVMTSSHKSETS 169
G R+ + +N T +KK +K E SL +S+Q ++S+ +S + S+ +T+
Sbjct: 68 GQRAKQEALANSTSLKKQLAAKKSEASSLSIAVSEQEAHVSSQKAATESSVQSTTTVDTT 127
Query: 170 STVTKKFGNF*KVN---------DANCRGVLRALTAVTVT 262
T T + V DANCRG+ RA + T+T
Sbjct: 128 QTTTNQAEEMVTVAPNAGKKYHLDANCRGLKRATSTTTMT 167
>UniRef50_Q5H1X1 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 360
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 34 RDEGQEAGSVEGDRQPGQEDLKANDHLGDYRKEVRNDQLSQIGDQLHRHQEIR 192
R EG E EGD++ +++ D + R+E R S+ GDQ RHQE R
Sbjct: 177 RQEGSEEDCKEGDQEDCRQEGSEEDRQ-ESRQEDRQKGSSEEGDQEVRHQEDR 228
>UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 945
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 10 VRLPDHQQRDEGQEAGSVEGDRQPGQEDLKANDHLGDYRKEVRNDQ 147
VRL H+ G GS G RQ G+++L L D+R E+R +Q
Sbjct: 664 VRLEFHRGIGAGARGGSALGRRQLGRDELLRRRDLRDHRTELRVEQ 709
>UniRef50_UPI00015B5F58 Cluster: PREDICTED: similar to CG7602-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG7602-PA - Nasonia vitripennis
Length = 1055
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = -2
Query: 397 QFSRKKNLMFLLSLVEHNENLKNKIYTRFLTTKHGSLTTSTVLDRCHGDSCQRTKHATTI 218
Q S K+N +FLLS + N + IY + + G T + CH D+ R + +
Sbjct: 570 QRSCKRNSLFLLSKISFNIMRREIIYAQLNNPQKGITDIVTRTNNCHTDTRMRKYYQAAL 629
Query: 217 CVIYLLEVAEFL 182
+ ++ + L
Sbjct: 630 LITAVVSLVSLL 641
>UniRef50_A0M756 Cluster: Putative uncharacterized protein; n=2;
Flavobacteriaceae|Rep: Putative uncharacterized protein
- Gramella forsetii (strain KT0803)
Length = 344
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 430 HDNV*HLTIFYQ----FSRKKNLMFLLSLVEHNENLKNKIYTRFLTTKHGSL 287
H+ V H+ YQ + KKN LL ++ E+ KN + +R L+ KHG L
Sbjct: 293 HNVVIHMKSEYQIIGLYGIKKNFKTLLVFLDKKEDFKNLVESRNLSLKHGRL 344
>UniRef50_Q9U0J3 Cluster: Putative uncharacterized protein PFD0460c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFD0460c - Plasmodium falciparum
(isolate 3D7)
Length = 1010
Score = 32.7 bits (71), Expect = 8.6
Identities = 25/94 (26%), Positives = 42/94 (44%)
Frame = -2
Query: 457 LRH*FRHLVHDNV*HLTIFYQFSRKKNLMFLLSLVEHNENLKNKIYTRFLTTKHGSLTTS 278
+ H H VH N + YQ + N++ L S+ N+ N++ +
Sbjct: 527 VNHNVNHNVHHNNNISNVLYQNNHSINIL-LNSVKNELRNILNELALPNSENFPIMVLNE 585
Query: 277 TVLDRCHGDSCQRTKHATTICVIYLLEVAEFLGD 176
V D C SC+++KH T+I + +L EF+ D
Sbjct: 586 DVKD-CKIISCEKSKHCTSIIIRDVLITDEFMSD 618
>UniRef50_Q22DK9 Cluster: B-box zinc finger family protein; n=1;
Tetrahymena thermophila SB210|Rep: B-box zinc finger
family protein - Tetrahymena thermophila SB210
Length = 1414
Score = 32.7 bits (71), Expect = 8.6
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +1
Query: 22 DHQQRDEGQEAGSVEGD--RQPGQEDLK----ANDHLGDYRKEVRNDQLSQIGDQLHRHQ 183
D QQR EAGS +G+ Q ++++ +N L + +V DQL+++ Q+ + Q
Sbjct: 198 DLQQRKLHSEAGSSQGEIKSQSSIQNIQNRKMSNQELFQQKNKV--DQLNELEQQIQKFQ 255
Query: 184 EIRQLLEGK*RKLS 225
EI+Q +E K RK S
Sbjct: 256 EIQQQIEKK-RKSS 268
>UniRef50_A0DBT5 Cluster: Chromosome undetermined scaffold_446,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_446,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 387
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = -2
Query: 523 FLINKISFFLIKMTSKTFNKLQLRH*FRHLV--HDNV*HLTIFYQFSRKKNLMFLLSLVE 350
FLI F + +T K+FNK+Q R +L ++ + + +FS+K +++ +++ E
Sbjct: 131 FLIPFALFLFMFITKKSFNKIQFRRHICYLFDEYNEQNYFWEYIKFSKKISIILIMTYFE 190
Query: 349 HNENLKNKIYTRFL 308
N LK + FL
Sbjct: 191 SNILLKATLLGLFL 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,725,940
Number of Sequences: 1657284
Number of extensions: 8608310
Number of successful extensions: 26822
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26773
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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