Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060643.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    28   0.24 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   2.2  
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    24   5.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.2  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    23   9.0  

>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 48  H*LYNISRSPAVFKQSQPTVFKQ-SQPTVFK 137
           H + +I  +PA+++ S PT+ K  +QPT+ K
Sbjct: 44  HHVGSIHAAPAIYQHSAPTIVKTIAQPTIIK 74


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 294 GQVNISNDDPLLSQEDDTIESVDRASQ 374
           G++ I++ DPL S E+D  E+VDR  Q
Sbjct: 280 GEILITHIDPLAS-EEDLKEAVDRKLQ 305


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 255 RTYHSQGVTYHVHGQVNISNDDPLLSQEDDTI 350
           R + S  +  +V  Q+N++ D+PL + + D I
Sbjct: 75  RVHQSLAMCRYVAKQINLAGDNPLEALQIDAI 106


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 333 QEDDTIESVDRASQQYQNSIASETAAQRALQRGLDLESQL 452
           Q   TI  V+R     Q SIA  TAA+  L R  D + QL
Sbjct: 176 QPSSTISLVERYDNNAQLSIALRTAAELKLFR-FDNQYQL 214


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 527 LATVIILIRRIRWTISGRPW 468
           L  V IL RR+R  +  RPW
Sbjct: 137 LQAVAILDRRVRPAVIRRPW 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,502
Number of Sequences: 2352
Number of extensions: 7293
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)