BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060643.seq
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-4478|AAF56965.1| 158|Drosophila melanogaster CG15517-P... 31 2.0
Y08362-1|CAA69649.1| 943|Drosophila melanogaster neurotransmitt... 30 3.4
U66460-1|AAC47292.1| 658|Drosophila melanogaster inebriated pro... 30 3.4
BT009955-1|AAQ22424.1| 943|Drosophila melanogaster RH37701p pro... 30 3.4
AY128432-1|AAM75025.1| 943|Drosophila melanogaster HL05815p pro... 30 3.4
AE014134-755|AAN10349.1| 658|Drosophila melanogaster CG15444-PA... 30 3.4
AE014134-754|AAO41160.1| 943|Drosophila melanogaster CG15444-PD... 30 3.4
AE014134-753|AAO41159.1| 943|Drosophila melanogaster CG15444-PC... 30 3.4
AE014134-752|AAF51001.1| 943|Drosophila melanogaster CG15444-PB... 30 3.4
AE014297-3591|AAS65210.1| 715|Drosophila melanogaster CG6695-PB... 29 4.5
AY118441-1|AAM48470.1| 961|Drosophila melanogaster SD06668p pro... 29 6.0
AY071079-1|AAL48701.1| 386|Drosophila melanogaster RE14730p pro... 29 6.0
AE014297-3590|AAF56321.3| 961|Drosophila melanogaster CG6695-PA... 29 6.0
AE014296-3175|AAF49141.1| 407|Drosophila melanogaster CG14100-P... 29 6.0
>AE014297-4478|AAF56965.1| 158|Drosophila melanogaster CG15517-PA
protein.
Length = 158
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 205 HAAPDSAPDGXLCDCLNTVGCDCLNTVGCDCLKTVGCDCL 86
H D+A G L T GC C T+ C C ++V D L
Sbjct: 20 HENVDAA--GLLSSSAQTQGCQCSLTMSCSCCQSVSVDLL 57
>Y08362-1|CAA69649.1| 943|Drosophila melanogaster neurotransmitter
transporter protein.
Length = 943
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 90 QSQPTVFKQSQPTVFKQSQPTVFKQSQSXPSGAESGAAC 206
Q TV+K + P + Q + Q+ PS AE+G C
Sbjct: 903 QEMATVYKPTNPHLLNLGQKCGYNAMQASPSHAEAGGPC 941
>U66460-1|AAC47292.1| 658|Drosophila melanogaster inebriated
protein.
Length = 658
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 90 QSQPTVFKQSQPTVFKQSQPTVFKQSQSXPSGAESGAAC 206
Q TV+K + P + Q + Q+ PS AE+G C
Sbjct: 618 QEMATVYKPTNPHLLNLGQKCGYNAMQASPSHAEAGGPC 656
>BT009955-1|AAQ22424.1| 943|Drosophila melanogaster RH37701p protein.
Length = 943
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 90 QSQPTVFKQSQPTVFKQSQPTVFKQSQSXPSGAESGAAC 206
Q TV+K + P + Q + Q+ PS AE+G C
Sbjct: 903 QEMATVYKPTNPHLLNLGQKCGYNAMQASPSHAEAGGPC 941
>AY128432-1|AAM75025.1| 943|Drosophila melanogaster HL05815p protein.
Length = 943
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 90 QSQPTVFKQSQPTVFKQSQPTVFKQSQSXPSGAESGAAC 206
Q TV+K + P + Q + Q+ PS AE+G C
Sbjct: 903 QEMATVYKPTNPHLLNLGQKCGYNAMQASPSHAEAGGPC 941
>AE014134-755|AAN10349.1| 658|Drosophila melanogaster CG15444-PA,
isoform A protein.
Length = 658
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 90 QSQPTVFKQSQPTVFKQSQPTVFKQSQSXPSGAESGAAC 206
Q TV+K + P + Q + Q+ PS AE+G C
Sbjct: 618 QEMATVYKPTNPHLLNLGQKCGYNAMQASPSHAEAGGPC 656
>AE014134-754|AAO41160.1| 943|Drosophila melanogaster CG15444-PD,
isoform D protein.
Length = 943
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 90 QSQPTVFKQSQPTVFKQSQPTVFKQSQSXPSGAESGAAC 206
Q TV+K + P + Q + Q+ PS AE+G C
Sbjct: 903 QEMATVYKPTNPHLLNLGQKCGYNAMQASPSHAEAGGPC 941
>AE014134-753|AAO41159.1| 943|Drosophila melanogaster CG15444-PC,
isoform C protein.
Length = 943
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 90 QSQPTVFKQSQPTVFKQSQPTVFKQSQSXPSGAESGAAC 206
Q TV+K + P + Q + Q+ PS AE+G C
Sbjct: 903 QEMATVYKPTNPHLLNLGQKCGYNAMQASPSHAEAGGPC 941
>AE014134-752|AAF51001.1| 943|Drosophila melanogaster CG15444-PB,
isoform B protein.
Length = 943
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 90 QSQPTVFKQSQPTVFKQSQPTVFKQSQSXPSGAESGAAC 206
Q TV+K + P + Q + Q+ PS AE+G C
Sbjct: 903 QEMATVYKPTNPHLLNLGQKCGYNAMQASPSHAEAGGPC 941
>AE014297-3591|AAS65210.1| 715|Drosophila melanogaster CG6695-PB,
isoform B protein.
Length = 715
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -3
Query: 552 GDCGESNKSGDCDNTHSTDKVDYKRETLGKFHSSVVTQDLNLAAEPSAQLSPT-QCYSGT 376
G+ S+ S +N+ +D + ++ LGK +L+ A+E S L PT S T
Sbjct: 637 GNDTSSSSSSGAENSEGSDNEEQQQPQLGKRAEDSDDMELDTASERSHALQPTMSSSSST 696
Query: 375 AEKHDPHFQW 346
+ ++W
Sbjct: 697 GLRTSEFWRW 706
>AY118441-1|AAM48470.1| 961|Drosophila melanogaster SD06668p
protein.
Length = 961
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -3
Query: 552 GDCGESNKSGDCDNTHSTDKVDYKRETLGKFHSSVVTQDLNLAAEPSAQLSPTQCYSGT 376
G+ S+ S +N+ +D + ++ LGK +L+ A+E S L PT S +
Sbjct: 637 GNDTSSSSSSGAENSEGSDNEEQQQPQLGKRAEDSDDMELDTASERSHALQPTMSSSSS 695
>AY071079-1|AAL48701.1| 386|Drosophila melanogaster RE14730p
protein.
Length = 386
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 300 VNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQRGLDLESQLMSE 461
V ++ DPL S T+ S R + Q + Q ALQ GL +E L S+
Sbjct: 91 VRLTLQDPLTSTLLTTVRSRKRRDKNRQIIVEGRRLIQEALQCGLKMEVLLFSQ 144
>AE014297-3590|AAF56321.3| 961|Drosophila melanogaster CG6695-PA,
isoform A protein.
Length = 961
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -3
Query: 552 GDCGESNKSGDCDNTHSTDKVDYKRETLGKFHSSVVTQDLNLAAEPSAQLSPTQCYSGT 376
G+ S+ S +N+ +D + ++ LGK +L+ A+E S L PT S +
Sbjct: 637 GNDTSSSSSSGAENSEGSDNEEQQQPQLGKRAEDSDDMELDTASERSHALQPTMSSSSS 695
>AE014296-3175|AAF49141.1| 407|Drosophila melanogaster CG14100-PA
protein.
Length = 407
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 300 VNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQRGLDLESQLMSE 461
V ++ DPL S T+ S R + Q + Q ALQ GL +E L S+
Sbjct: 112 VRLTLQDPLTSTLLTTVRSRKRRDKNRQIIVEGRRLIQEALQCGLKMEVLLFSQ 165
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,937,632
Number of Sequences: 53049
Number of extensions: 329043
Number of successful extensions: 1458
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -