Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060642.seq
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 193 9e-50
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 193 9e-50
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 160 7e-40
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 145 2e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 125 3e-29
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 125 3e-29
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 73 1e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 73 1e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 69 4e-12
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 69 4e-12
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 69 4e-12
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 41 0.001
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.021
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 35 0.063
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.083
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.25
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.25
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.58
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.58
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.77
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.77
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.77
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 30 1.8
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 30 1.8
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.8
Z46787-1|CAA86739.2| 360|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 9.5
L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid desa... 27 9.5
AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical ... 27 9.5
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 9.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 193 bits (471), Expect = 9e-50
Identities = 99/146 (67%), Positives = 112/146 (76%), Gaps = 3/146 (2%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 437 NGQTREHALLAFTLGVKQLIVGVNKW---IPLNHHTVSPDLRNQEGSILIHQEDWLQPSC 607
NGQTREHALLA TLGVKQLIV NK P ++ N+ + ++ P
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFI--KKIGYNPKA 187
Query: 608 CRFSVPISGWHGDNMLELSTKMPWFK 685
F VPISG++GDNMLE+S+ MPWFK
Sbjct: 188 VPF-VPISGFNGDNMLEVSSNMPWFK 212
Score = 145 bits (352), Expect = 2e-35
Identities = 67/69 (97%), Positives = 67/69 (97%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERXR 258
DKLKAER R
Sbjct: 61 DKLKAERER 69
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 193 bits (471), Expect = 9e-50
Identities = 99/146 (67%), Positives = 112/146 (76%), Gaps = 3/146 (2%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 437 NGQTREHALLAFTLGVKQLIVGVNKW---IPLNHHTVSPDLRNQEGSILIHQEDWLQPSC 607
NGQTREHALLA TLGVKQLIV NK P ++ N+ + ++ P
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFI--KKIGYNPKA 187
Query: 608 CRFSVPISGWHGDNMLELSTKMPWFK 685
F VPISG++GDNMLE+S+ MPWFK
Sbjct: 188 VPF-VPISGFNGDNMLEVSSNMPWFK 212
Score = 145 bits (352), Expect = 2e-35
Identities = 67/69 (97%), Positives = 67/69 (97%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERXR 258
DKLKAER R
Sbjct: 61 DKLKAERER 69
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 160 bits (389), Expect = 7e-40
Identities = 74/80 (92%), Positives = 78/80 (97%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 437 NGQTREHALLAFTLGVKQLI 496
NGQTREHALLA TLGVKQL+
Sbjct: 130 NGQTREHALLAQTLGVKQLV 149
Score = 145 bits (352), Expect = 2e-35
Identities = 67/69 (97%), Positives = 67/69 (97%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERXR 258
DKLKAER R
Sbjct: 61 DKLKAERER 69
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 145 bits (352), Expect = 2e-35
Identities = 67/69 (97%), Positives = 67/69 (97%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERXR 258
DKLKAER R
Sbjct: 61 DKLKAERER 69
Score = 102 bits (244), Expect = 3e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 400
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +2
Query: 620 VPISGWHGDNMLELSTKMPWFK 685
VPISG++GDNMLE+S+ MPWFK
Sbjct: 157 VPISGFNGDNMLEVSSNMPWFK 178
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 555 IKKEVSSYIKKIGYNPAAVAF 617
I EVS +IKKIGYNP AV F
Sbjct: 136 ITNEVSGFIKKIGYNPKAVPF 156
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 508 QMDSTEPPYSEPRFEE 555
+MDSTEPP+SE RF E
Sbjct: 120 KMDSTEPPFSEARFTE 135
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAER 252
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 125 bits (302), Expect = 3e-29
Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 292
Query: 437 NGQTREHALLAFTLGVKQLIVGVNKWIPLN-HHTVSPDLRNQEGSILIHQEDWLQPSCCR 613
GQT+EHALL +LGV QLIV VNK ++ +++N L Q + +P +
Sbjct: 293 GGQTKEHALLLRSLGVTQLIVAVNKLDTVDWSQDRFDEIKNNLSVFLTRQAGFSKP---K 349
Query: 614 FSVPISGWHGDNMLELSTKMPWF 682
F VP+SG+ G+N+++ ++ W+
Sbjct: 350 F-VPVSGFTGENLIK-RMELDWY 370
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 61 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 240
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 241 KAERXR 258
+ ER R
Sbjct: 227 EEERER 232
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 125 bits (302), Expect = 3e-29
Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 310
Query: 437 NGQTREHALLAFTLGVKQLIVGVNKWIPLN-HHTVSPDLRNQEGSILIHQEDWLQPSCCR 613
GQT+EHALL +LGV QLIV VNK ++ +++N L Q + +P +
Sbjct: 311 GGQTKEHALLLRSLGVTQLIVAVNKLDTVDWSQDRFDEIKNNLSVFLTRQAGFSKP---K 367
Query: 614 FSVPISGWHGDNMLELSTKMPWF 682
F VP+SG+ G+N+++ ++ W+
Sbjct: 368 F-VPVSGFTGENLIK-RMELDWY 388
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 61 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 240
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 241 KAERXR 258
+ ER R
Sbjct: 245 EEERER 250
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 102 bits (245), Expect = 2e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G +
Sbjct: 172 GKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDR 231
Query: 437 NGQTREHALLAFTLGVKQLIVGVNK 511
GQTREH++L T GVK L++ VNK
Sbjct: 232 GGQTREHSMLVKTAGVKHLVILVNK 256
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +1
Query: 55 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 234
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 235 KLKAERXR 258
ER +
Sbjct: 164 TNDEEREK 171
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 437 NGQTREHALLAFTLGVKQLIVGVNK 511
QT+EH +LA +GVK + + +NK
Sbjct: 148 --QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 64 KTHINIVVIGHVDSGKSTTT 123
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 437 NGQTREHALLAFTLGVKQLIVGVNK 511
QT+EH +LA +GVK + + +NK
Sbjct: 148 --QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 64 KTHINIVVIGHVDSGKSTTT 123
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 151
Query: 437 NGQTREHALLAFTLGV--KQLIVGVNK 511
QTREH LLA +GV ++V +NK
Sbjct: 152 --QTREHLLLARQVGVPLDNIVVFMNK 176
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 58 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 228
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 229 LDKLKAERXRYH 264
L+ A+R H
Sbjct: 105 LEYETAKRHYAH 116
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 152
Query: 437 NGQTREHALLAFTLGV--KQLIVGVNK 511
QTREH LLA +GV ++V +NK
Sbjct: 153 --QTREHLLLARQVGVPLDNIVVFMNK 177
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 58 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 228
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 229 LDKLKAERXRYH 264
L+ A+R H
Sbjct: 106 LEYETAKRHYAH 117
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP----- 152
Query: 437 NGQTREHALLAFTLGV--KQLIVGVNK 511
QTREH LLA +GV ++V +NK
Sbjct: 153 --QTREHLLLARQVGVPLDNIVVFMNK 177
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 58 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 228
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 229 LDKLKAERXRYH 264
L+ A+R H
Sbjct: 106 LEYETAKRHYAH 117
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 433
GIT I + E +K VT +D PGH F G AD VL+VAA G E
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE---- 243
Query: 434 KNGQTREHALLAFTLGVKQLIVGVNK 511
QT + A V QL+V VNK
Sbjct: 244 ---QTAQSIKFAKDANV-QLVVAVNK 265
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +2
Query: 308 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 487
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 488 QLIVGVNK 511
++I+ +NK
Sbjct: 127 RVIIVLNK 134
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 73 INIVVIGHVDSGKSTTT 123
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 34.7 bits (76), Expect = 0.063
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -1
Query: 516 IHLFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 382
++LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 11 LNLFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 76 NIVVIGHVDSGKSTTTGHLIYKCGGI 153
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/85 (30%), Positives = 37/85 (43%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 87 GITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------V 139
Query: 437 NGQTREHALLAFTLGVKQLIVGVNK 511
QT + LAF + Q+I +NK
Sbjct: 140 QAQTIANFWLAFEKNI-QIIPVINK 163
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 76 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 192
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 76 NIVVIGHVDSGKSTTTGHLIYKCGGID 156
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 97 GITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 147
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 263 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 147
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 263 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 248 SVXGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
S+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 183 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 248 SVXGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
S+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 58 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 28 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 138
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 28 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 138
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.77
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 305 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 484
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 485 KQLIVGVNK 511
L++ NK
Sbjct: 182 NHLMILQNK 190
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERXRY 261
+KR ++ EKE + F Y LDK+K ER Y
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCY 307
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERXRY 261
+KR ++ EKE + F Y LDK+K ER Y
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCY 242
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 314 IIDAPGHRDFIKNMITGTSQADCAVLIV 397
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z46787-1|CAA86739.2| 360|Caenorhabditis elegans Hypothetical
protein C16C10.1 protein.
Length = 360
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 668 WLKAPTCCLRAI--QKWAPKSDSSWVVANLL 582
WLK CC RA +KW P S+ VA ++
Sbjct: 153 WLKKKMCCRRAFSPEKWTPPDWSAAAVAGIV 183
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 73 INIVVIGHVDSGKSTTT 123
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 308 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 403
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 308 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 397
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 308 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 397
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid
desaturase protein.
Length = 402
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +2
Query: 527 HHTVSPDLRNQEGSILIHQEDW-LQPSCCRF--SVPISGW 637
HH + + G + I +DW PS R+ +P SGW
Sbjct: 162 HHAFTNHIDKDHGHVWIQDKDWEAMPSWKRWFNPIPFSGW 201
>AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical
protein Y67H2A.8 protein.
Length = 402
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +2
Query: 527 HHTVSPDLRNQEGSILIHQEDW-LQPSCCRF--SVPISGW 637
HH + + G + I +DW PS R+ +P SGW
Sbjct: 162 HHAFTNHIDKDHGHVWIQDKDWEAMPSWKRWFNPIPFSGW 201
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -3
Query: 493 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 335
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 334 VSRSINDGNI 305
S S +D I
Sbjct: 84 FSGSKSDAEI 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,045,477
Number of Sequences: 27780
Number of extensions: 339255
Number of successful extensions: 1100
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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