Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060641.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.18 
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       28   0.24 
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    27   0.73 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   2.2  
Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.           24   5.2  
Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.           24   5.2  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +3

Query: 261 GDTADQCAEAYLWYGQALLGLSRD 332
           GDT DQCA+ Y  YG AL G   D
Sbjct: 751 GDTCDQCAKGY--YGNALGGTPYD 772


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 494 NGGRYSTKXAELKPAQSTTSDAPGASSEVTDNAEPSTSNDDAND 625
           NGG  ST       A +T++ APG ++     A P T+    +D
Sbjct: 400 NGGTPSTTTMPPSVAPTTSTVAPGTTTTTPTGANPGTTQPPTSD 443


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +3

Query: 261 GDTADQCAEAYLWYGQALLGLSR 329
           G T DQC E YL Y   L  L R
Sbjct: 246 GSTGDQCTEVYLAYRDVLGELGR 268


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 299 VWPSTIRFVQRRKWSFGRWYARIRQ 373
           +W  T+RF  RR+W   R+Y  + Q
Sbjct: 772 IWCHTLRFANRRQW-LRRFYRPVVQ 795


>Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +3

Query: 273 DQCAEAYLWYGQ 308
           + C++AY+W+G+
Sbjct: 199 EDCSDAYMWFGE 210


>Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +3

Query: 273 DQCAEAYLWYGQ 308
           + C++AY+W+G+
Sbjct: 199 EDCSDAYMWFGE 210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,400
Number of Sequences: 2352
Number of extensions: 10340
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)