Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060641.seq
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-4|CAA90441.1| 382|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 32 0.44
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 29 4.1
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 29 4.1
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 29 4.1
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 4.1
U97403-2|AAB52472.2| 649|Caenorhabditis elegans Hypothetical pr... 28 5.4
U39854-1|AAA81076.2| 236|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL132948-29|CAD31829.1| 314|Caenorhabditis elegans Hypothetical... 28 7.2
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 28 7.2
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 27 9.5
>Z50109-4|CAA90441.1| 382|Caenorhabditis elegans Hypothetical
protein C09H10.6 protein.
Length = 382
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 130 DMIEVSTATPAELLGAGRRHLAVRDFNSAAEVLAKACELLAK--NMVTQRTSVLRHIYGM 303
+ +E AELL AGRR L V D + A++ L++A EL ++ + T + YGM
Sbjct: 33 ETVEQKEKRLAELLAAGRRALKVNDIDKASDSLSEATELSSEIYGENHENTFDSLYYYGM 92
Query: 304 A 306
A
Sbjct: 93 A 93
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 509 STKXAELKPAQSTTSDAPGASSEVTDNAEPSTSNDDAN 622
ST A ++P+QS AP + +++ + PSTS+ N
Sbjct: 571 STAPASMEPSQSVDQSAPPSQAQIPATSTPSTSSQQQN 608
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDD 658
E ++TT+ A ASSE T + + + + S V+ GSGD+
Sbjct: 1750 EASGEETTTAAATEASSEETTTSAVTEGSGEETTTSAVSEGSGDE 1794
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1105 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1150
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1182 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1227
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDD 658
E ++TT+ A ASSE T + + + + S V+ GSGD+
Sbjct: 1750 EASGEETTTAAATEASSEETTTSAVTEGSGEETTTSAVSEGSGDE 1794
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1105 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1150
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1182 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1227
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDD 658
E ++TT+ A ASSE T + + + + S V+ GSGD+
Sbjct: 1750 EASGEETTTAAATEASSEETTTSAVTEGSGEETTTSAVSEGSGDE 1794
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1105 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1150
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1182 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1227
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDD 658
E ++TT+ A ASSE T + + + + S V+ GSGD+
Sbjct: 1750 EASGEETTTAAATEASSEETTTSAVTEGSGEETTTSAVSEGSGDE 1794
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1105 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1150
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1182 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1227
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDD 658
E ++TT+ A ASSE T + + + + S V+ GSGD+
Sbjct: 1750 EASGEETTTAAATEASSEETTTSAVTEGSGEETTTSAVSEGSGDE 1794
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1105 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1150
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1182 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1227
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDD 658
E ++TT+ A ASSE T + + + + S V+ GSGD+
Sbjct: 1750 EASGEETTTAAATEASSEETTTSAVTEGSGEETTTSAVSEGSGDE 1794
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1105 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1150
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 524 ELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDV 661
E ++TT+ A ASSE T + ++ + + S V GSG+++
Sbjct: 1182 EASGEETTTAAATEASSEETTTPAVTEASGEESTTSAVTEGSGEEI 1227
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 509 STKXAELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDVDQ 667
+T + STTS +SS++T +PS S+ S VN GS Q
Sbjct: 672 TTVSVQTTQVSSTTSPVASSSSQMTSTQQPSGSSSSIG--STVNQGSSSVTTQ 722
>U97403-2|AAB52472.2| 649|Caenorhabditis elegans Hypothetical
protein T10E9.4 protein.
Length = 649
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 269 CVTMFLANSSQALASTSAAELKSLTAKWRRPAPSN 165
C+ +FL S+ A+ STS AEL + TA P N
Sbjct: 7 CLLIFLIVSASAVDSTSTAELTTETAPVTAPTGPN 41
>U39854-1|AAA81076.2| 236|Caenorhabditis elegans Hypothetical
protein W06B11.3 protein.
Length = 236
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 506 YSTKXAELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDVDQ 667
+ ++ ELK S D P + + A+P T ND+ + + ++ +DVD+
Sbjct: 169 FQSRNRELKVKNSARVDRPPMVAPLAPEAQPKTRNDNFPNPN-FSISDDEDVDE 221
>AL132948-29|CAD31829.1| 314|Caenorhabditis elegans Hypothetical
protein Y39B6A.37 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 509 STKXAELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDVDQFSSLLW 685
S++ +L PA++ +A G S D+ P+ +DD ++ DD+ LL+
Sbjct: 93 SSESGDLPPAENR--EAGGGESSGFDSDPPTDDDDDEAPQELLERRESDDISDKGQLLY 149
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 447 EPEKSKTEHNEAESTSMEADTQQK 518
E EK K EH+E+ +ME DT+ +
Sbjct: 238 EEEKDKEEHHESNDENMEFDTRAR 261
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 485 IYFNGGRYSTKXAELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDVD 664
I+F RY K E + A S + D + P NDD +D + M DD +
Sbjct: 196 IWFQNHRYKCKRQEKEKAMSGLGHS-------EDGSSPPPDNDDDDDKYSIEMDDKDDEE 248
Query: 665 QFSS 676
+ S
Sbjct: 249 EEES 252
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 485 IYFNGGRYSTKXAELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDXSVVNMGSGDDVD 664
I+F RY K E + A S + D + P NDD +D + M DD +
Sbjct: 196 IWFQNHRYKCKRQEKEKAMSGLGHS-------EDGSSPPPDNDDDDDKYSIEMDDKDDEE 248
Query: 665 QFSS 676
+ S
Sbjct: 249 EEES 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,616,238
Number of Sequences: 27780
Number of extensions: 249445
Number of successful extensions: 950
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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