Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060640.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.77 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 413 FYMCVYFFYC 384
           F +C+Y+FYC
Sbjct: 142 FLLCIYYFYC 151



 Score = 24.6 bits (51), Expect = 0.77
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 413 FYMCVYFFYC 384
           F +C+Y+FYC
Sbjct: 281 FLLCIYYFYC 290



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -2

Query: 407 MCVYFFYCLH 378
           +C+Y+FY +H
Sbjct: 256 VCIYYFYYMH 265



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 413 FYMCVYFFYC 384
           F +C+Y F+C
Sbjct: 162 FLLCIYHFFC 171


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 144 YTQEILVEAVALQEGFYHSIF 206
           Y +E L EAV L   FY++ F
Sbjct: 141 YFREYLAEAVQLYFQFYYTYF 161


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 404 CVYFFYCLHGWTSSR 360
           C YF+ C++G T  R
Sbjct: 192 CQYFYVCINGDTPRR 206


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +2

Query: 350 TRWAESSSTHVSNKKNTHTY 409
           TR + SSSTH S+++ + ++
Sbjct: 384 TRKSTSSSTHTSSQQTSDSF 403


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 389 KKNTHTYKKNECVSY 433
           +KNTH YK ++ V++
Sbjct: 319 QKNTHMYKGDQWVAF 333


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 330 GSGNNLTQGGP 362
           GSGNN   GGP
Sbjct: 530 GSGNNQPPGGP 540


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +1

Query: 421 MCFLWLLF*YYIKSVFTPINS*LKQACSFTRSCVNIFLS 537
           M   +  F   +K  F  +N  +KQ C         FLS
Sbjct: 180 MLIQFCAFVVVLKQKFCVVNQYIKQVCKLNNGHYKNFLS 218


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +1

Query: 421 MCFLWLLF*YYIKSVFTPINS*LKQACSFTRSCVNIFLS 537
           M   +  F   +K  F  +N  +KQ C         FLS
Sbjct: 5   MLIQFCAFVVVLKQKFCVVNQYIKQVCKLNNGHYKNFLS 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,624
Number of Sequences: 336
Number of extensions: 3115
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)