Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060637.seq
(555 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 178 3e-47
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 178 3e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 171 3e-45
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 171 5e-45
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.018
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.90
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.1
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.4
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 178 bits (434), Expect = 3e-47
Identities = 88/99 (88%), Positives = 88/99 (88%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITIDIALWKFETSKYYVTIIDAPG RDFIK MITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 72
Query: 438 NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
NGQTREHALLAF LGVK LI M STEPPYSE RFE
Sbjct: 73 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFE 111
Score = 26.2 bits (55), Expect = 0.22
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 223 WVLDKLKAERD 255
WVLDKLKAER+
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 178 bits (434), Expect = 3e-47
Identities = 88/99 (88%), Positives = 88/99 (88%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITIDIALWKFETSKYYVTIIDAPG RDFIK MITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 70 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 129
Query: 438 NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
NGQTREHALLAF LGVK LI M STEPPYSE RFE
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFE 168
Score = 144 bits (349), Expect = 5e-37
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERD 255
DKLKAER+
Sbjct: 61 DKLKAERE 68
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 171 bits (417), Expect = 3e-45
Identities = 84/99 (84%), Positives = 86/99 (86%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITIDIALWKFET+KYYVTIIDAPG RDFIK MITGTSQADCAVLIVAAG GEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISK 129
Query: 438 NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
NGQTREHALLAF LGVK LI M T+PPYSE RFE
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFE 168
Score = 144 bits (349), Expect = 5e-37
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERD 255
DKLKAER+
Sbjct: 61 DKLKAERE 68
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 171 bits (415), Expect = 5e-45
Identities = 84/95 (88%), Positives = 84/95 (88%)
Frame = +3
Query: 270 DIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 449
DIALWKFETSKYYVTIIDAPG RDFIK MITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 450 REHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
REHALLAF LGVK LI M STEPPYSE RFE
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFE 95
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.9 bits (64), Expect = 0.018
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 309 VTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTG 413
VT +D PG FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.39
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 64 KTHINIVVIGHVDSGKST 117
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.90
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 73 INIVVIGHVDSGKST 117
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 65 FSLPIFG*SRITNCV*Y 15
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 455 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 369
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,916
Number of Sequences: 438
Number of extensions: 2675
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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