Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060637.seq
(555 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 151 3e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 151 3e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 151 3e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 151 3e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 85 4e-17
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 80 1e-15
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 60 1e-09
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 58 3e-09
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.17
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.17
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.39
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.39
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 31 0.68
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 31 0.68
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 1.6
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 29 2.1
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.1
At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 29 2.8
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 28 3.6
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 27 6.4
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 27 8.4
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 27 8.4
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 27 8.4
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 151 bits (366), Expect = 3e-37
Identities = 72/99 (72%), Positives = 82/99 (82%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITIDIALWKFET+KYY T+IDAPG RDFIK MITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 438 NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
+GQTREHALLAF LGVK +I M +T P YS+ R++
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Score = 128 bits (310), Expect = 2e-30
Identities = 60/68 (88%), Positives = 62/68 (91%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 232 DKLKAERD 255
DKLKAER+
Sbjct: 61 DKLKAERE 68
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (366), Expect = 3e-37
Identities = 72/99 (72%), Positives = 82/99 (82%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITIDIALWKFET+KYY T+IDAPG RDFIK MITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 438 NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
+GQTREHALLAF LGVK +I M +T P YS+ R++
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Score = 128 bits (310), Expect = 2e-30
Identities = 60/68 (88%), Positives = 62/68 (91%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 232 DKLKAERD 255
DKLKAER+
Sbjct: 61 DKLKAERE 68
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (366), Expect = 3e-37
Identities = 72/99 (72%), Positives = 82/99 (82%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITIDIALWKFET+KYY T+IDAPG RDFIK MITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 438 NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
+GQTREHALLAF LGVK +I M +T P YS+ R++
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Score = 128 bits (310), Expect = 2e-30
Identities = 60/68 (88%), Positives = 62/68 (91%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 232 DKLKAERD 255
DKLKAER+
Sbjct: 61 DKLKAERE 68
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (366), Expect = 3e-37
Identities = 72/99 (72%), Positives = 82/99 (82%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITIDIALWKFET+KYY T+IDAPG RDFIK MITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 438 NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
+GQTREHALLAF LGVK +I M +T P YS+ R++
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Score = 128 bits (310), Expect = 2e-30
Identities = 60/68 (88%), Positives = 62/68 (91%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 232 DKLKAERD 255
DKLKAER+
Sbjct: 61 DKLKAERE 68
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 84.6 bits (200), Expect = 4e-17
Identities = 42/99 (42%), Positives = 58/99 (58%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
G T+++ FET TI+DAPG + ++ MI+G SQAD VL+++A GEFE G +
Sbjct: 164 GKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 223
Query: 438 NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
GQTREH LA LGV LI M +S+ R++
Sbjct: 224 GGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYD 262
Score = 68.1 bits (159), Expect = 4e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +1
Query: 61 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 240
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 241 KAER 252
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 79.8 bits (188), Expect = 1e-15
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GIT+ +A+ F + +++V ++D+PG +DF+ MI G +QAD A+L++ A G FEAG
Sbjct: 302 GITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDN 361
Query: 438 -NGQTREHALLAFXLGVKXLIRRSXXMGSTEPPYSEPRFE 554
GQTREHA + GV+ +I M YS+ RF+
Sbjct: 362 LKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFD 399
Score = 76.2 bits (179), Expect = 1e-14
Identities = 31/63 (49%), Positives = 46/63 (73%)
Frame = +1
Query: 67 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 246
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 247 ERD 255
ER+
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/80 (38%), Positives = 46/80 (57%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITI+ A ++ET + +D PG D++K MITG +Q D A+L+V+ G
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP----- 181
Query: 438 NGQTREHALLAFXLGVKXLI 497
QT+EH LLA +GV ++
Sbjct: 182 --QTKEHILLAKQVGVPDMV 199
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 49 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 183
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 58.4 bits (135), Expect = 3e-09
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITI A ++ET+K + +D PG D++K MITG +Q D +L+V+ G
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP----- 169
Query: 438 NGQTREHALLAFXLGVKXLI 497
QT+EH LLA +GV L+
Sbjct: 170 --QTKEHILLARQVGVPSLV 187
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 58 KEKTHINIVVIGHVDSGKSTTT 123
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 76 NIVVIGHVDSGKSTTTGHLIYKCGG 150
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 261 ITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTG 413
IT+ + + Y + +ID+PG DF + T +D A+++V A G
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 64 KTHINIVVIGHVDSGKSTTTGHLIYKCG 147
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.5 bits (68), Expect = 0.39
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITI A Y V IID PG DF + D A+L++ + G I+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 438 NGQTREH 458
+ Q R +
Sbjct: 178 DRQMRRY 184
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 76 NIVVIGHVDSGKSTTTGHLIYKCGGI 153
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.5 bits (68), Expect = 0.39
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +3
Query: 258 GITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGISK 437
GITI A Y V IID PG DF + D A+L++ + G I+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 438 NGQTREH 458
+ Q R +
Sbjct: 178 DRQMRRY 184
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 76 NIVVIGHVDSGKSTTTGHLIYKCGGI 153
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 0.68
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 261 ITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTG 413
+ + + L + Y I+D PG +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 0.68
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 261 ITIDIALWKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTG 413
+ + + L + Y I+D PG +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 309 VTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTG 413
+T +D PG F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 291 ETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTG 413
E S Y + +ID PG DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 40 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 159
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 76 NIVVIGHVDSGKSTTTGHLIYKCG 147
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At3g05470.1 68416.m00599 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 884
Score = 28.7 bits (61), Expect = 2.8
Identities = 24/85 (28%), Positives = 35/85 (41%)
Frame = -2
Query: 401 SYDEHSAISLRGSCDHXLDEISXSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSNTQ 222
S D+ S S+ G + +S + S + V +S E +D SRS F +S +
Sbjct: 308 SDDDESFHSVGGGSQYSNPRLSNASSASGSVNVGSSQRFSEHKLDIPECSRSDFGISVSA 367
Query: 221 AYLKDPLPISWASFSNFSMVRLSIP 147
P P FSN + LS P
Sbjct: 368 PPPPPPPPPPLPQFSNKRIHTLSSP 392
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 76 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 174
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 258 GITIDIAL----WKFETSKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTG 413
GITI + + +E + + + +ID PG DF + + + A+L+V A G
Sbjct: 133 GITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 297 SKYYVTIIDAPGXRDFIKXMITGTSQADCAVLIVAAGTGEFEAGI 431
++Y +D PG ++ ++ G + LIVAA T F +
Sbjct: 2 ARYAAGAVDCPGSPKSVRIVVVGDKGTGKSSLIVAAATDSFPPNV 46
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 315 IIDAPGXRDFIKXMITGTSQADCAVLIV 398
+ID PG F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 315 IIDAPGXRDFIKXMITGTSQADCAVLIV 398
+ID PG F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 315 IIDAPGXRDFIKXMITGTSQADCAVLIV 398
+ID PG F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,056,797
Number of Sequences: 28952
Number of extensions: 203697
Number of successful extensions: 585
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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