Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060636.seq
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.32 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    25   0.56 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.0  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   3.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 507  YAKPSAKKAAGNSSQNAKPKPS 572
            YAKP  K   G  +   KPKP+
Sbjct: 2192 YAKPDPKCILGRDNDKTKPKPT 2213


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 156 QNTGTCPESSCACPETSCACPETSCACPESS 248
           +NTG C      C + SC   + SCA  + S
Sbjct: 99  KNTGRCAFDGICCSQDSCHA-DKSCASDDKS 128


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 519 SAKKAAGNSSQNAKPKPSXXP 581
           +AKKAAG S  +  P P   P
Sbjct: 303 AAKKAAGASPYSGTPTPMMSP 323


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 595 HPKAQKDWG 621
           HP+ +KDWG
Sbjct: 76  HPETEKDWG 84


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 171 CPESSCACPETSC 209
           CP+ S AC + +C
Sbjct: 117 CPDGSLACGDGNC 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,753
Number of Sequences: 336
Number of extensions: 831
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)