Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060635.seq
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10129-1|CAA71216.1| 1274|Homo sapiens myosin binding protein C ...    32   2.2  
X84075-1|CAA58882.1| 1274|Homo sapiens cardiac myosin-binding pr...    32   2.2  
U91629-1|AAC04620.1| 1274|Homo sapiens cardiac myosin binding pr...    32   2.2  
BC151211-1|AAI51212.1| 1274|Homo sapiens myosin binding protein ...    32   2.2  
BC142685-1|AAI42686.1| 1274|Homo sapiens myosin binding protein ...    32   2.2  
AY518390-1|AAR89909.1| 1273|Homo sapiens myosin binding protein ...    32   2.2  
EF560722-1|ABQ59032.1| 1274|Homo sapiens MYBPC3 protein protein.       31   2.9  

>Y10129-1|CAA71216.1| 1274|Homo sapiens myosin binding protein C
           gene protein.
          Length = 1274

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 526 WQLASLRFQPPSEREQVIFRQGYLPTRGLITHNKCKNKIYKKNT 395
           W++  LR  PPSE E++ F+ G    RG++   K   +  KK+T
Sbjct: 322 WEI--LRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEKKST 363


>X84075-1|CAA58882.1| 1274|Homo sapiens cardiac myosin-binding
           protein C  protein.
          Length = 1274

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 526 WQLASLRFQPPSEREQVIFRQGYLPTRGLITHNKCKNKIYKKNT 395
           W++  LR  PPSE E++ F+ G    RG++   K   +  KK+T
Sbjct: 322 WEI--LRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEKKST 363


>U91629-1|AAC04620.1| 1274|Homo sapiens cardiac myosin binding
           protein-C protein.
          Length = 1274

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 526 WQLASLRFQPPSEREQVIFRQGYLPTRGLITHNKCKNKIYKKNT 395
           W++  LR  PPSE E++ F+ G    RG++   K   +  KK+T
Sbjct: 322 WEI--LRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEKKST 363


>BC151211-1|AAI51212.1| 1274|Homo sapiens myosin binding protein C,
           cardiac protein.
          Length = 1274

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 526 WQLASLRFQPPSEREQVIFRQGYLPTRGLITHNKCKNKIYKKNT 395
           W++  LR  PPSE E++ F+ G    RG++   K   +  KK+T
Sbjct: 322 WEI--LRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEKKST 363


>BC142685-1|AAI42686.1| 1274|Homo sapiens myosin binding protein C,
           cardiac protein.
          Length = 1274

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 526 WQLASLRFQPPSEREQVIFRQGYLPTRGLITHNKCKNKIYKKNT 395
           W++  LR  PPSE E++ F+ G    RG++   K   +  KK+T
Sbjct: 322 WEI--LRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEKKST 363


>AY518390-1|AAR89909.1| 1273|Homo sapiens myosin binding protein C,
           cardiac protein.
          Length = 1273

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 526 WQLASLRFQPPSEREQVIFRQGYLPTRGLITHNKCKNKIYKKNT 395
           W++  LR  PPSE E++ F+ G    RG++   K   +  KK+T
Sbjct: 322 WEI--LRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEKKST 363


>EF560722-1|ABQ59032.1| 1274|Homo sapiens MYBPC3 protein protein.
          Length = 1274

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 514 SLRFQPPSEREQVIFRQGYLPTRGLITHNKCKNKIYKKNT 395
           +LR  PPSE E++ F+ G    RG++   K   +  KK+T
Sbjct: 324 TLRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEKKST 363


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,007,935
Number of Sequences: 237096
Number of extensions: 1643545
Number of successful extensions: 2504
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2504
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)