Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060633.seq
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 29 4.1
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 29 4.1
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 29 4.1
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 29 4.1
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 28 5.4
Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 28 7.2
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 28 7.2
Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical p... 27 9.5
AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical
protein T05E11.4 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 296 YHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNSIASET 418
YH Q ++S DD +++DD I+S A +++QN I +++
Sbjct: 386 YHEDSQCSLSTDDDREAKDDDYIDS--DAEEKFQNMIDNDS 424
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = +2
Query: 350 EDDTIESVDRASQQYQNSIASET----AAQRALQR---GLDLESQLMSEISPRSPAYSPP 508
ED E +D++ Q ++ + E A L++ +DLE ++S PR + S
Sbjct: 259 EDTIFEDMDQSDNQEKSELLDEVENVEATANELEKLDVSIDLELNILSSEQPRDESRSVV 318
Query: 509 IRRMTYYHSSPDL 547
+ YY + DL
Sbjct: 319 LYEKKYYCENADL 331
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +2
Query: 293 TYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQ 439
T + +N+ DDPLL T E +D + Q + + +R ++
Sbjct: 440 TQKLAAALNVHKDDPLLQVYSTTQEKLDAVTSQLEKEVKKSKGYEREIE 488
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +2
Query: 293 TYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQ 439
T + +N+ DDPLL T E +D + Q + + +R ++
Sbjct: 468 TQKLAAALNVHKDDPLLQVYSTTQEKLDAVTSQLEKEVKKSKGYEREIE 516
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +2
Query: 293 TYHVHGQVNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQ 439
T + +N+ DDPLL T E +D + Q + + +R ++
Sbjct: 440 TQKLAAALNVHKDDPLLQVYSTTQEKLDAVTSQLEKEVKKSKGYEREIE 488
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +2
Query: 314 VNISNDDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQ 439
+N+ DDPLL T E +D + Q + + +R ++
Sbjct: 449 LNVHKDDPLLQVYSTTQEKLDAVTSQLEKEVKKSKGYEREIE 490
>Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical
protein W10D5.3e protein.
Length = 673
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 329 DDPLLSQEDDTIESVDRASQQYQNSIASETAAQRALQRGLDLESQLMSEISPRSPAYSP- 505
DD +++ DD E ++RAS + + Q+ + D+E + + PR A S
Sbjct: 497 DDDIITLSDDDDEELNRASAEL--AAQKTPPQQKKKTKDDDIEIITLDDTPPRPVAASAN 554
Query: 506 -PIRRMTYYHSSP 541
P+R+M+ + P
Sbjct: 555 LPMRQMSQQNQMP 567
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 368 SVDRASQQYQNSIASETAAQRALQ 439
S+D+A Q++ N + S+ QRA Q
Sbjct: 293 SIDKARQEFTNGVMSDAGVQRATQ 316
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 368 SVDRASQQYQNSIASETAAQRALQ 439
S+D+A Q++ N + S+ QRA Q
Sbjct: 293 SIDKARQEFTNGVMSDAGVQRATQ 316
>Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +2
Query: 362 IESVDRASQQYQNSIASETAAQRALQRGLDLESQLMSEISPRSPAYSPPIRRMTYYHSSP 541
+ S + N+ + T + +L DL Q SP + P IRR +HS P
Sbjct: 395 MSSKSSTPDDFNNTTLNSTYPEDSLLNTSDLLKQRKENRSPPAKKSCPMIRRTEPFHSVP 454
Query: 542 DLFDS 556
+S
Sbjct: 455 STSNS 459
>AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +2
Query: 362 IESVDRASQQYQNSIASETAAQRALQRGLDLESQLMSEISPRSPAYSPPIRRMTYYHSSP 541
+ S + N+ + T + +L DL Q SP + P IRR +HS P
Sbjct: 395 MSSKSSTPDDFNNTTLNSTYPEDSLLNTSDLLKQRKENRSPPAKKSCPMIRRTEPFHSVP 454
Query: 542 DLFDS 556
+S
Sbjct: 455 STSNS 459
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,533,717
Number of Sequences: 27780
Number of extensions: 167667
Number of successful extensions: 619
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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