Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060631.seq
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    26   0.70 
AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding pr...    23   6.5  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    23   6.5  

>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 345 PSVVMVTILNSFSG*FLFKLSITKF--VCTSATRSSWSRRECLVSFHRPFFI 196
           PS++++  L + +G FL  L+ T F  +C ++T  S S   C  S+  PF I
Sbjct: 6   PSLLLLLSLATVNGAFLSNLNATCFRCICDASTGCSTS-TTCRQSYCGPFSI 56


>AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding
           protein AgamOBP46 protein.
          Length = 202

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 498 PMTXPSGNVVGKSFXECTTKS 436
           P   P  NVV K+  ECT K+
Sbjct: 110 PANSPWLNVVRKAIKECTAKA 130


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 498 PMTXPSGNVVGKSFXECTTKS 436
           P   P  NVV K+  ECT K+
Sbjct: 107 PANSPWLNVVRKAIKECTAKA 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,323
Number of Sequences: 2352
Number of extensions: 7247
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)