Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060631.seq
         (541 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X04808-1|CAA28499.1|  361|Homo sapiens protein ( Human mRNA for ...   100   6e-21
X04217-1|CAA27801.1|  344|Homo sapiens protein ( Human mRNA for ...   100   6e-21
M95623-2|AAA60030.1|  344|Homo sapiens hydroxymethylbilane synth...   100   6e-21
M95623-1|AAA60029.1|  361|Homo sapiens hydroxymethylbilane synth...   100   6e-21
BC019323-1|AAH19323.1|  361|Homo sapiens hydroxymethylbilane syn...   100   6e-21
BC008149-1|AAH08149.1|  361|Homo sapiens hydroxymethylbilane syn...   100   6e-21
BC000520-1|AAH00520.1|  361|Homo sapiens hydroxymethylbilane syn...   100   6e-21

>X04808-1|CAA28499.1|  361|Homo sapiens protein ( Human mRNA for
           non-erythropoietic porphobilinogen deaminase
           (hydroxymethylbilane synthase; EC4.3.1.8). ).
          Length = 361

 Score = 99.5 bits (237), Expect = 6e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++ ++A +QT+ V+ +LK +YP  +F+I+ M+T GD++LD  L  IGEKSL TK L  AL
Sbjct: 26  RKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHAL 85

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
               VD VVHSLKDLPT LP G  IGA+ K
Sbjct: 86  EKNEVDLVVHSLKDLPTVLPPGFTIGAICK 115


>X04217-1|CAA27801.1|  344|Homo sapiens protein ( Human mRNA for
           porphobilinogen deaminase (PBG-D, EC 4.3.1.8). ).
          Length = 344

 Score = 99.5 bits (237), Expect = 6e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++ ++A +QT+ V+ +LK +YP  +F+I+ M+T GD++LD  L  IGEKSL TK L  AL
Sbjct: 9   RKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHAL 68

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
               VD VVHSLKDLPT LP G  IGA+ K
Sbjct: 69  EKNEVDLVVHSLKDLPTVLPPGFTIGAICK 98


>M95623-2|AAA60030.1|  344|Homo sapiens hydroxymethylbilane synthase
           protein.
          Length = 344

 Score = 99.5 bits (237), Expect = 6e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++ ++A +QT+ V+ +LK +YP  +F+I+ M+T GD++LD  L  IGEKSL TK L  AL
Sbjct: 9   RKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHAL 68

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
               VD VVHSLKDLPT LP G  IGA+ K
Sbjct: 69  EKNEVDLVVHSLKDLPTVLPPGFTIGAICK 98


>M95623-1|AAA60029.1|  361|Homo sapiens hydroxymethylbilane synthase
           protein.
          Length = 361

 Score = 99.5 bits (237), Expect = 6e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++ ++A +QT+ V+ +LK +YP  +F+I+ M+T GD++LD  L  IGEKSL TK L  AL
Sbjct: 26  RKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHAL 85

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
               VD VVHSLKDLPT LP G  IGA+ K
Sbjct: 86  EKNEVDLVVHSLKDLPTVLPPGFTIGAICK 115


>BC019323-1|AAH19323.1|  361|Homo sapiens hydroxymethylbilane
           synthase protein.
          Length = 361

 Score = 99.5 bits (237), Expect = 6e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++ ++A +QT+ V+ +LK +YP  +F+I+ M+T GD++LD  L  IGEKSL TK L  AL
Sbjct: 26  RKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHAL 85

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
               VD VVHSLKDLPT LP G  IGA+ K
Sbjct: 86  EKNEVDLVVHSLKDLPTVLPPGFTIGAICK 115


>BC008149-1|AAH08149.1|  361|Homo sapiens hydroxymethylbilane
           synthase protein.
          Length = 361

 Score = 99.5 bits (237), Expect = 6e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++ ++A +QT+ V+ +LK +YP  +F+I+ M+T GD++LD  L  IGEKSL TK L  AL
Sbjct: 26  RKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHAL 85

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
               VD VVHSLKDLPT LP G  IGA+ K
Sbjct: 86  EKNEVDLVVHSLKDLPTVLPPGFTIGAICK 115


>BC000520-1|AAH00520.1|  361|Homo sapiens hydroxymethylbilane
           synthase protein.
          Length = 361

 Score = 99.5 bits (237), Expect = 6e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++ ++A +QT+ V+ +LK +YP  +F+I+ M+T GD++LD  L  IGEKSL TK L  AL
Sbjct: 26  RKSQLARIQTDSVVATLKASYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHAL 85

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
               VD VVHSLKDLPT LP G  IGA+ K
Sbjct: 86  EKNEVDLVVHSLKDLPTVLPPGFTIGAICK 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,737,067
Number of Sequences: 237096
Number of extensions: 1064292
Number of successful extensions: 1368
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)