Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060631.seq
         (541 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023907-1|ABA81841.1|  652|Drosophila melanogaster GH16723p pro...   108   5e-24
AE014296-238|AAF47484.1|  652|Drosophila melanogaster CG9165-PA ...   108   5e-24

>BT023907-1|ABA81841.1|  652|Drosophila melanogaster GH16723p
           protein.
          Length = 652

 Score =  108 bits (259), Expect = 5e-24
 Identities = 52/90 (57%), Positives = 68/90 (75%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++  +AL+QT  VI  L++ YP+++F+I TM+T GDRVL+  LP IGEKSL T+ L DAL
Sbjct: 13  RKSELALIQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGEKSLFTRDLEDAL 72

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
            +  VDFVVHSLKDLPT LP G+ IGAV +
Sbjct: 73  RNGGVDFVVHSLKDLPTALPTGMAIGAVLE 102


>AE014296-238|AAF47484.1|  652|Drosophila melanogaster CG9165-PA
           protein.
          Length = 652

 Score =  108 bits (259), Expect = 5e-24
 Identities = 52/90 (57%), Positives = 68/90 (75%)
 Frame = +2

Query: 242 QEERVALVQTNFVIDSLKRNYPEKEFKIVTMTTLGDRVLDQPLPXIGEKSLXTKXLXDAL 421
           ++  +AL+QT  VI  L++ YP+++F+I TM+T GDRVL+  LP IGEKSL T+ L DAL
Sbjct: 13  RKSELALIQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGEKSLFTRDLEDAL 72

Query: 422 MSKNVDFVVHSLKDLPTTLPDGLVIGAVFK 511
            +  VDFVVHSLKDLPT LP G+ IGAV +
Sbjct: 73  RNGGVDFVVHSLKDLPTALPTGMAIGAVLE 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,010,493
Number of Sequences: 53049
Number of extensions: 312879
Number of successful extensions: 455
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)