Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060630.seq
(551 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 73 3e-12
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 68 1e-10
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 66 7e-10
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 6e-09
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 58 1e-07
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 57 2e-07
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 56 5e-07
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 54 2e-06
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 53 4e-06
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 52 1e-05
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 51 2e-05
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 50 3e-05
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 48 1e-04
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 47 3e-04
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 46 4e-04
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 45 0.001
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 43 0.004
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 43 0.004
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 42 0.013
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 40 0.029
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 40 0.051
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 39 0.089
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 38 0.12
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 37 0.27
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 37 0.36
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.36
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 36 0.47
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 36 0.47
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 36 0.47
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 36 0.63
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 36 0.63
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 35 1.1
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 35 1.1
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 35 1.1
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 35 1.1
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 35 1.4
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 34 2.5
UniRef50_A7BRY1 Cluster: Excinuclease ATPase subunit; n=1; Beggi... 33 3.3
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 33 3.3
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 33 3.3
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 33 4.4
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 32 7.7
UniRef50_Q00YB7 Cluster: RNA helicase, DRH1; n=1; Ostreococcus t... 32 7.7
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 32 7.7
UniRef50_Q0UGH6 Cluster: Predicted protein; n=1; Phaeosphaeria n... 28 7.9
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 73.3 bits (172), Expect = 3e-12
Identities = 50/131 (38%), Positives = 65/131 (49%)
Frame = +1
Query: 136 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFLIMCN 315
D +L PF KNFY HP V RSPYEV+ YR E+TV G + + + + +
Sbjct: 235 DFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQVPNPIQDFSEVHLPDYVMK 294
Query: 316 KV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQPXIX 495
++ RQ K PT + + PIAMSG G+ KTG K YILP NQ +
Sbjct: 295 EIRRQGY-KAPTAIQAQGWPIAMSGSNF-VGIAKTG-SGKTLGYILP-AIVHINNQQPLQ 350
Query: 496 RXDGRLLWVXA 528
R DG + V A
Sbjct: 351 RGDGPIALVLA 361
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 68.1 bits (159), Expect = 1e-10
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Frame = +1
Query: 133 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFL-IM 309
W V+L PF KNFY P +VL R+ E E + ++E+T+ G + ++ F +
Sbjct: 109 WSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYV 168
Query: 310 CNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQPX 489
N++ +Q K PT + + PIAMSG+ + GV +TG K AY+LP NQP
Sbjct: 169 MNEIRKQGFAK-PTAIQAQGWPIAMSGRDL-VGVAQTG-SGKTLAYVLP-AVVHINNQPR 224
Query: 490 IXRXDGRLLWVXA 528
+ R DG + V A
Sbjct: 225 LERGDGPIALVLA 237
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
+V P FEE FPDYV ++ G+ +P AIQAQGW
Sbjct: 151 QVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGW 188
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 65.7 bits (153), Expect = 7e-10
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = +1
Query: 133 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIF-LIM 309
WD V L+PF K+F+ P +VL+RS EV +Y +E+T+ G + F +
Sbjct: 53 WDQVKLEPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFGESGFPSVF 112
Query: 310 CNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQPX 489
+++ RQ + PT + IAMSG+ + G+ KTG K AYILP +NQP
Sbjct: 113 LDEMGRQGF-QEPTSIQAVGWSIAMSGRDM-VGIAKTG-SGKTLAYILPALIHI-SNQPR 168
Query: 490 IXRXDGRLLWVXA 528
+ R DG + V A
Sbjct: 169 LLRGDGPIALVLA 181
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 62.5 bits (145), Expect = 6e-09
Identities = 43/136 (31%), Positives = 67/136 (49%)
Frame = +1
Query: 121 VAPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIF 300
V P W L+PF K+FY PHP V+ R+P EV+ +R ++TV G ++ F
Sbjct: 179 VKPIWKD--LEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDFEEGNF 236
Query: 301 LIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TN 480
+ NPT + + PIA+SG+ + G+ +TG K AY+LP +
Sbjct: 237 PDFVMNEINKMGFPNPTAIQAQGWPIALSGRDL-VGIAQTG-SGKTLAYMLP-GIVHIAH 293
Query: 481 QPXIXRXDGRLLWVXA 528
Q + R +G ++ V A
Sbjct: 294 QKPLQRGEGPVVLVLA 309
Score = 50.8 bits (116), Expect = 2e-05
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +3
Query: 261 VHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
V +P Q FEE NFPD+V + MG+ P AIQAQGW
Sbjct: 224 VPHPSQDFEEGNFPDFVMNEINKMGFPNPTAIQAQGW 260
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 58.0 bits (134), Expect = 1e-07
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Frame = +1
Query: 121 VAP-DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTV-SGLRFIILFNTLKKQ 294
+AP DW +++L PF KNFY H + K S EV+E R H++T+ G ++ K
Sbjct: 59 LAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKI 118
Query: 295 IFLIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP* 474
F K + PT +++ PIA+SGK + G +TG K A+ILP
Sbjct: 119 GFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDM-IGKAETG-SGKTLAFILPAF-VHI 175
Query: 475 TNQPXIXRXDGRLLWVXA 528
QP + DG ++ V A
Sbjct: 176 LAQPNLKYGDGPIVLVLA 193
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 57.2 bits (132), Expect = 2e-07
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIF-LI 306
+WD SL F K+FY HP V RS +VE +R H++T++G T + F
Sbjct: 85 EWDINSLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRY 144
Query: 307 MCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQP 486
+ ++V Q PT + + P+A+SG+ + G+ +TG K Y LP QP
Sbjct: 145 VMDEVKAQGFPA-PTAIQSQGWPMALSGRDV-VGIAETG-SGKTLTYCLP-SIVHINAQP 200
Query: 487 XIXRXDGRLLWVXA 528
+ DG ++ V A
Sbjct: 201 LLAPGDGPIVLVLA 214
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 261 VHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
V P++ F+EA FP YV VK G+ P AIQ+QGW
Sbjct: 129 VPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGW 165
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 56.0 bits (129), Expect = 5e-07
Identities = 40/133 (30%), Positives = 63/133 (47%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFLIM 309
D + +PFNKNFY+ HP + K+S E+++ R + VSG + F
Sbjct: 57 DHSEIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQ 116
Query: 310 CNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQPX 489
R+ PT + +A PIA+SG+ I G+ KTG K A++ P +QP
Sbjct: 117 MMASIRKLEYTQPTQIQCQALPIALSGRDI-IGIAKTG-SGKTAAFLWP-ALVHIMDQPE 173
Query: 490 IXRXDGRLLWVXA 528
+ DG ++ + A
Sbjct: 174 LQVGDGPIVLICA 186
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 54.0 bits (124), Expect = 2e-06
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
+V P++YF+EANFPDY Q + G+ EP IQ+QGW
Sbjct: 245 DVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGW 282
Score = 51.2 bits (117), Expect = 2e-05
Identities = 40/147 (27%), Positives = 69/147 (46%)
Frame = +1
Query: 88 GKKNSLEVRTCVAPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFI 267
G +++L+ + PD+ S L PF KNFY P V S +V +YR ++TV G
Sbjct: 190 GGRDALDSLSLPKPDFRS--LIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVP 247
Query: 268 ILFNTLKKQIFLIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAY 447
++ F C + + PT + + P+A+ G+ + G+ +TG K +Y
Sbjct: 248 KPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDM-IGIAQTG-SGKTLSY 305
Query: 448 ILPXXCAP*TNQPXIXRXDGRLLWVXA 528
+LP QP + + DG ++ + A
Sbjct: 306 LLPGLVHV-GAQPRLEQGDGPIVLILA 331
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = +1
Query: 133 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGL---RFIILFNTLKKQIFL 303
WD L F KNFY H V + S +EVEEYR E+T+ G + II F+ ++
Sbjct: 38 WDLDELPKFEKNFYTEHLEVERTSQFEVEEYRRKKEITIRGTGCPKPIIKFHQAHFPQYV 97
Query: 304 IMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTG 423
+ V Q K PT + + P+A+SG+ + G+ +TG
Sbjct: 98 M---DVLMQQNFKEPTPIQAQGFPLALSGRDM-VGIAQTG 133
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 51.6 bits (118), Expect = 1e-05
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = +1
Query: 148 LQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGL---RFIILFNTLKKQIFLIMCNK 318
L PF KNFY P++ + EVEEYR E+T+ G + I F+ + +++ +
Sbjct: 53 LPPFEKNFYVESPSIAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGFPDYVL--QE 110
Query: 319 V*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQPXIXR 498
+ + T+ PT + + P+A+ G+ + G+ +TG K AY+LP QP +
Sbjct: 111 IEKAGFTE-PTPIQAQGWPMALKGRDL-IGIAETG-SGKTIAYLLPAIVHV-NAQPILDH 166
Query: 499 XDGRLLWVXA 528
DG ++ V A
Sbjct: 167 GDGPIVLVLA 176
Score = 47.6 bits (108), Expect = 2e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
+V PI+ F + FPDYV Q ++ G+ EP IQAQGW
Sbjct: 90 DVPKPIKSFHDVGFPDYVLQEIEKAGFTEPTPIQAQGW 127
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 51.2 bits (117), Expect = 2e-05
Identities = 35/134 (26%), Positives = 61/134 (45%)
Frame = +1
Query: 106 EVRTCVAPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTL 285
++ A D S+ +P NK+FY+ ++ + E +YR + VSG T
Sbjct: 171 KIEPITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTF 230
Query: 286 KKQIFLIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXC 465
+ F ++ + PT + +A PI +SG+ + G+ KTG K A++LP
Sbjct: 231 EDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDV-IGIAKTG-SGKTAAFVLP-MI 287
Query: 466 AP*TNQPXIXRXDG 507
+QP + R +G
Sbjct: 288 VHIMDQPELQRDEG 301
Score = 37.5 bits (83), Expect = 0.20
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQ 365
+VH P++ FE+ F + +K Y++P AIQ Q
Sbjct: 222 DVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQ 257
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 50.4 bits (115), Expect = 3e-05
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLR---FIILFNTLKKQIF 300
D S+ + F KNFY HP + K + +VE+ R E+ VSG+R I+ F L
Sbjct: 13 DHSSIKYEAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEE 72
Query: 301 LIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILP 456
L+ ++ + K PT + +A P +SG+ I GV KTG K +Y+ P
Sbjct: 73 LM--RQITKLGFEK-PTQIQCQALPCGLSGRDI-VGVAKTG-SGKTVSYLWP 119
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 48.0 bits (109), Expect = 1e-04
Identities = 32/122 (26%), Positives = 55/122 (45%)
Frame = +1
Query: 91 KKNSLEVRTCVAPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFII 270
K +++ + ++D +L PF KNFY P R EV Y +E+ V+G I
Sbjct: 91 KYDNISTKQLQPVNYDITTLPPFEKNFYVESPITANRDAEEVSRYLQENEIQVNGCESIK 150
Query: 271 LFNTLKKQIFLIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYI 450
T ++ F V ++ PT + PI + GK + G+ +TG K +++
Sbjct: 151 ALLTFEECNFPQSILDVIKEQNYIKPTPIQAIGWPIVLQGKDV-VGIAETG-SGKTISFL 208
Query: 451 LP 456
+P
Sbjct: 209 IP 210
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 47.2 bits (107), Expect = 3e-04
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = +1
Query: 133 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFL--I 306
W S L PF K+FY P + S +V+ Y E+T+ G R I + +Q L
Sbjct: 74 WTSEELTPFEKDFYKPSEFISNLSETDVKGYLAKLEITLKG-RNIPRPSMEFEQGGLPDY 132
Query: 307 MCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQP 486
+ + +Q +K PT + + PIA+SG+ + G+ +TG K AYI P T+Q
Sbjct: 133 ILEEANKQGFSK-PTAIQAQGMPIALSGRDM-VGIAQTG-SGKTLAYIAP-ALVHITHQD 188
Query: 487 XIXRXDGRLLWVXA 528
+ R DG + V A
Sbjct: 189 QLRRGDGPIALVLA 202
Score = 36.7 bits (81), Expect = 0.36
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 261 VHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQG 368
+ P FE+ PDY+ + G+ +P AIQAQG
Sbjct: 117 IPRPSMEFEQGGLPDYILEEANKQGFSKPTAIQAQG 152
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 46.4 bits (105), Expect = 4e-04
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRF----IILFNTLKKQI 297
+W+ + L F KNFY HP V + E +E R E+TV R ++ F
Sbjct: 160 NWNQIELVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPR 219
Query: 298 FLIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILP 456
+++ + K PT ++++ PIA+SG+ + G+ +TG K A++LP
Sbjct: 220 YILSSIEA---AGFKEPTPIQVQSWPIALSGRDM-IGIAETG-SGKTLAFLLP 267
Score = 40.7 bits (91), Expect = 0.022
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
+V P+ FE +FP Y+ ++ G+KEP IQ Q W
Sbjct: 204 DVPKPVVKFEYTSFPRYILSSIEAAGFKEPTPIQVQSW 241
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 45.2 bits (102), Expect = 0.001
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHE-VTVSGLRFIILFNTLKKQIFLI 306
D SV+ PF KNFY P + + + +VE+YR + E + V G T +
Sbjct: 460 DHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSK 519
Query: 307 MCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQP 486
+V R+ + PT + +A P MSG+ + G+ KTG K A+ILP +QP
Sbjct: 520 KEMEVLRRLGFEKPTPIQCQAIPAIMSGRDL-IGIAKTG-SGKTLAFILPMF-RHILDQP 576
Query: 487 XIXRXDGRLLWVXA 528
+ DG + + A
Sbjct: 577 SMEDGDGAIAIIMA 590
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 43.2 bits (97), Expect = 0.004
Identities = 38/131 (29%), Positives = 56/131 (42%)
Frame = +1
Query: 136 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFLIMCN 315
D L F KNFY P+V + EVE YR E+TV G + F
Sbjct: 46 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVL 105
Query: 316 KV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQPXIX 495
+ + PT + + P+A+ G+ + G+ +TG K AY+LP QP +
Sbjct: 106 QEITKAGFVEPTPIQSQGWPMALRGRDL-IGIAETG-SGKTLAYLLPAIVHV-NAQPILA 162
Query: 496 RXDGRLLWVXA 528
DG ++ V A
Sbjct: 163 PGDGPIVLVLA 173
Score = 43.2 bits (97), Expect = 0.004
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
+V P++ F + FP+YV Q + G+ EP IQ+QGW
Sbjct: 87 DVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGW 124
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +3
Query: 249 KWVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
K V +PIQ FEEA F V + G+ EP AIQ QGW
Sbjct: 78 KGTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGW 118
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 41.5 bits (93), Expect = 0.013
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 261 VHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQ 365
V P++ +EEA FPD V Q VK +GY EP IQ Q
Sbjct: 296 VPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQ 330
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 40.3 bits (90), Expect = 0.029
Identities = 30/109 (27%), Positives = 49/109 (44%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFLIM 309
D + Q FNKNFY+ H + + +V + + V GL+ + F +
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 310 CNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILP 456
+ R+ + PT + A P A+SG+ + G+ KTG K AY+ P
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDV-LGIAKTG-SGKTAAYLWP 322
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 39.5 bits (88), Expect = 0.051
Identities = 33/126 (26%), Positives = 52/126 (41%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFLIM 309
D + +PF KNFY + +P E+ YR E+ + G T +
Sbjct: 435 DHSKIDYKPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTK 494
Query: 310 CNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQPX 489
++ + P + +A PI MSG+ G+ KTG K A++LP +QP
Sbjct: 495 ILDTIKKLNYERPMPIQAQALPIIMSGRDC-IGIAKTG-SGKTLAFVLP-MLRHIKDQPP 551
Query: 490 IXRXDG 507
+ DG
Sbjct: 552 VMPGDG 557
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 38.7 bits (86), Expect = 0.089
Identities = 29/109 (26%), Positives = 48/109 (44%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFLIM 309
D + PF KNFY+ H + +P ++ + R + VSG ++ F
Sbjct: 204 DHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 310 CNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILP 456
R+ PT + + P+A+SG+ + G+ KTG K A+I P
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDM-IGIAKTG-SGKTAAFIWP 310
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 38.3 bits (85), Expect = 0.12
Identities = 36/133 (27%), Positives = 56/133 (42%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILFNTLKKQIFLIM 309
+W+ L+ + Y P +RS E+ E+R E+T G T ++ F
Sbjct: 39 NWNHQKLESVTRLSYRPKVD-FRRSEREISEWRKTKEITTKGRDVPDPALTFEEVGFPAE 97
Query: 310 CNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQPX 489
R PT + + PIAMSG+ + G+ KTG K +Y+LP Q
Sbjct: 98 IADEWRYAEFTTPTPIQSQGWPIAMSGRDM-VGIAKTG-SGKTLSYLLPALMHI-DQQSR 154
Query: 490 IXRXDGRLLWVXA 528
+ R DG + + A
Sbjct: 155 LRRGDGPIALILA 167
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 37.1 bits (82), Expect = 0.27
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = +1
Query: 121 VAPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHE-VTVSGLRFIILFNTLKKQI 297
V D ++ +PFNK FY P + S + R + +TV G
Sbjct: 423 VTVDHSAIDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCG 482
Query: 298 FLIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILP 456
C V ++ PT + +A P MSG+ I GV KTG K A++LP
Sbjct: 483 LPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDI-IGVAKTG-SGKTMAFLLP 533
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 36.7 bits (81), Expect = 0.36
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 255 VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPDAIQAQGWA 374
V V +PI FE+ FP + + G+K P AIQAQGW+
Sbjct: 126 VTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWS 166
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 36.7 bits (81), Expect = 0.36
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Frame = +1
Query: 148 LQPFNKNFYDPHPTVLKRSPYEVEEYRXN-HEVTVSGLRFIILFNTLKKQIFL--IMCNK 318
L+PF K+FY V + EVEE R + + V G L T Q+ L + N
Sbjct: 232 LEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLI-TRWSQLGLPTDIMNL 290
Query: 319 V*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILP 456
+ ++ PT + +A P MSG+ + G+ KTG K +YILP
Sbjct: 291 ITKELKYDEPTAIQSQAIPAIMSGRDL-IGISKTG-SGKTISYILP 334
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 36.3 bits (80), Expect = 0.47
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +3
Query: 261 VHNPIQYFEEA--NFPDYVQQGVKTMGYKEPDAIQAQGW 371
+ NP+Q FE+A +P+ +++ +K G+ +P IQAQ W
Sbjct: 317 IPNPVQTFEQAFHEYPELLEE-IKKQGFAKPSPIQAQAW 354
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 36.3 bits (80), Expect = 0.47
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Frame = +1
Query: 148 LQPFNKNFYDPHPTVLKRSPYEVEEYRXN-HEVTVSGL---RFIILFNTLKKQIFLIMCN 315
L+PF KNFY + K S EV + R + V V G R I+ ++ L ++ N
Sbjct: 192 LKPFIKNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIM--N 249
Query: 316 KV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILP 456
+ R+ PT + +A P MSG+ + G+ KTG K ++ILP
Sbjct: 250 LLTRELEFTVPTPIQAQAIPAIMSGRDV-IGISKTG-SGKTVSFILP 294
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 36.3 bits (80), Expect = 0.47
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +3
Query: 261 VHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQ 359
+ NP++++EE+N P ++ +K +GY EP +Q
Sbjct: 252 IPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQ 284
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 35.9 bits (79), Expect = 0.63
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Frame = +1
Query: 91 KKNSLEVRTCVAPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXN-HEVTVSGLRFI 267
K+ LE + D ++ QPF K+FY +++ +P E ++ R ++ V G
Sbjct: 440 KQKKLEKKELKPVDHSTIDYQPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVP 499
Query: 268 ILFNT-----LKKQIFLIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQ 432
L ++ ++ K ++++ NP + +A P MSG+ G+ +TG
Sbjct: 500 KPIQNWYQCGLNDRVLNVLIEK--KKFI--NPFPIQAQAVPCIMSGRDF-IGIAETG-SG 553
Query: 433 KRXAYILPXXCAP*TNQPXIXRXDGRLLWVXA 528
K AY+LP +QP + DG + + A
Sbjct: 554 KTLAYLLP-LLRHVLDQPALKDGDGPIAIIMA 584
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 35.9 bits (79), Expect = 0.63
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRXNHE-VTVSGL---RFIILFNTLKKQI 297
D + + PF K+FY +LK EV R + + V G+ R II ++ L
Sbjct: 266 DHNQIQYHPFRKDFYTEPTEILKLPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPS 325
Query: 298 FLIMCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*T 477
++ + + + +P+ + +A P MSG+ I GV KTG K +++LP
Sbjct: 326 TIM--SIIEGRLNYSSPSSIQAQAIPAIMSGRDI-IGVAKTG-SGKTLSFVLP-LLRHIQ 380
Query: 478 NQPXIXRXDG 507
+QP + R DG
Sbjct: 381 DQPPLRRGDG 390
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 282 FEEANFPDYVQQGVKTMGYKEPDAIQAQ 365
FE NF V GV+ GYKEP IQAQ
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQ 30
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 35.1 bits (77), Expect = 1.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 246 CKWVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
C+ P F++A FP +++ +K GY P IQA+ W
Sbjct: 76 CERTRDLEPYVTFDDAKFPAALRKALKAQGYDAPTPIQAEAW 117
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 35.1 bits (77), Expect = 1.1
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +3
Query: 267 NPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQ 365
NPI+ ++E+N P + + ++ +GY++P IQ Q
Sbjct: 410 NPIRTWQESNLPREILEAIRQLGYEKPSPIQMQ 442
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 35.1 bits (77), Expect = 1.1
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Frame = +1
Query: 130 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEY-RXNHEVTVSGLRFIILFNTLKKQIFLI 306
D + PF KNFY ++ +EV+ + R N + V G + ++ +
Sbjct: 318 DHTKIEYLPFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPISSFSQCGLPD 377
Query: 307 MCNKV*RQWVTKNPTLFKLKAGPIAMSGKXI*FGVXKTGFRQKRXAYILPXXCAP*TNQP 486
K+ + + P +++ P M G+ + G+ +TG K A++LP +QP
Sbjct: 378 PILKILEKREYERPFPIQMQCIPALMCGRDV-IGIAETG-SGKTLAFLLPAIRHA-LDQP 434
Query: 487 XIXRXDGRLLWVXA 528
+ DG ++ V A
Sbjct: 435 SLRENDGMIVLVIA 448
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 34.7 bits (76), Expect = 1.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQ 365
EV PI FE FP+ + Q +K GY+ P IQ Q
Sbjct: 197 EVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQ 232
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 33.9 bits (74), Expect = 2.5
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 261 VHNPIQYFEE--ANFPDYVQQGVKTMGYKEPDAIQAQGW 371
+ NP+ FE+ A +PD +++ K MG+ +P IQ+Q W
Sbjct: 277 IPNPVWTFEQCFAEYPDMLEEITK-MGFSKPSPIQSQAW 314
>UniRef50_A7BRY1 Cluster: Excinuclease ATPase subunit; n=1;
Beggiatoa sp. PS|Rep: Excinuclease ATPase subunit -
Beggiatoa sp. PS
Length = 304
Score = 33.5 bits (73), Expect = 3.3
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 157 FNKNFYDPHPTVLKRSPYEVEEYRXNHEVTVSGLRFIILF--NTLKKQIFLIMCNKV*RQ 330
FN+NFY V KR + E+ + + LF N LK+ +F+ NKV +
Sbjct: 49 FNQNFYYFQSVVFKRFQLKFEDNLVWEVIKSDNEITLRLFENNDLKESVFVFDSNKVLPE 108
Query: 331 WVTKNPTLFKLK 366
W T+ +L ++
Sbjct: 109 WFTERVSLLNIR 120
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 33.5 bits (73), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 270 PIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
PI FE FP + + ++ G+ P IQAQ W
Sbjct: 148 PITSFETGGFPPEILKEIQRAGFSSPTPIQAQSW 181
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 33.5 bits (73), Expect = 3.3
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQ 365
++ NPI+ +++++ P ++ + + GYKEP IQ Q
Sbjct: 385 KIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ 420
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 33.1 bits (72), Expect = 4.4
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 258 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPDAIQ 359
++ NP++ +EEA P + + +K + YKEP +IQ
Sbjct: 243 DLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQ 276
>UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41;
n=5; Euteleostomi|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 306
Score = 32.3 bits (70), Expect = 7.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 270 PIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQG 368
PI+ F E FP + +G+K G P IQ QG
Sbjct: 170 PIKSFREMKFPQAILKGLKKKGIVHPTPIQIQG 202
>UniRef50_Q00YB7 Cluster: RNA helicase, DRH1; n=1; Ostreococcus
tauri|Rep: RNA helicase, DRH1 - Ostreococcus tauri
Length = 162
Score = 32.3 bits (70), Expect = 7.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 267 NPIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQGW 371
+P+ F++ +P + VK GY+ P IQ+Q W
Sbjct: 121 DPMTSFDQGPWPPALLDAVKRAGYEAPTGIQSQSW 155
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 32.3 bits (70), Expect = 7.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 270 PIQYFEEANFPDYVQQGVKTMGYKEPDAIQAQG 368
PI+ F E FP + G+ G K P IQ QG
Sbjct: 175 PIRSFREMKFPKGILNGLAAKGIKNPTPIQVQG 207
>UniRef50_Q0UGH6 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 1223
Score = 27.9 bits (59), Expect(2) = 7.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 291 ANFPDYVQQGVKTMGYKEPDAIQA 362
A+F YV+Q T+ Y EP AIQA
Sbjct: 829 ASFVPYVKQTEPTLFYSEPPAIQA 852
Score = 23.0 bits (47), Expect(2) = 7.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 369 WADSYVWEXNLVWRXQN 419
W+DS+ W N + R N
Sbjct: 891 WSDSFQWRNNSIVRFSN 907
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,438,660
Number of Sequences: 1657284
Number of extensions: 8131476
Number of successful extensions: 16486
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 16158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16475
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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